RNA–Protein interactions for RNA: ENST00000437196.1

EXT1-203, Transcript of exostosin glycosyltransferase 1, humanhuman

TSL 5

Gene EXT1, Length 1,446 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXT1-203ENST00000437196 GUCD1Q96NT3 240 aa14.24□□□□□ -0.13
EXT1-203ENST00000437196 CYLDQ9NQC7 956 aa14.24□□□□□ -0.13
EXT1-203ENST00000437196 SEPT11Q9NVA2 429 aaKnown RBP14.24□□□□□ -0.13
EXT1-203ENST00000437196 COMMD8Q9NX08 183 aa14.24□□□□□ -0.13
EXT1-203ENST00000437196 F8VP50 259 aa14.24□□□□□ -0.13
EXT1-203ENST00000437196 RTN3O95197 1032 aaPredicted RBP14.24□□□□□ -0.13
EXT1-203ENST00000437196 VNN2O95498 520 aa14.24□□□□□ -0.13
EXT1-203ENST00000437196 MMEP08473 750 aa14.24□□□□□ -0.13
EXT1-203ENST00000437196 GPD2P43304 727 aa14.24□□□□□ -0.13
EXT1-203ENST00000437196 ACADSBP45954 432 aa14.24□□□□□ -0.13
EXT1-203ENST00000437196 PDE4CQ08493 712 aa14.24□□□□□ -0.13
EXT1-203ENST00000437196 TWF1Q12792 350 aa14.24□□□□□ -0.13
EXT1-203ENST00000437196 PKDCCQ504Y2 493 aa14.24□□□□□ -0.13
EXT1-203ENST00000437196 DENND5BQ6ZUT9 1274 aa14.24□□□□□ -0.13
EXT1-203ENST00000437196 TTC30AQ86WT1 665 aa14.24□□□□□ -0.13
EXT1-203ENST00000437196 LEMD2Q8NC56 503 aa14.24□□□□□ -0.13
EXT1-203ENST00000437196 UBA3Q8TBC4 463 aa14.24□□□□□ -0.13
EXT1-203ENST00000437196 SECISBP2LQ93073 1101 aaKnown RBP14.24□□□□□ -0.13
EXT1-203ENST00000437196 CCDC42Q96M95 316 aa14.24□□□□□ -0.13
EXT1-203ENST00000437196 SMOQ99835 787 aa14.24□□□□□ -0.13
EXT1-203ENST00000437196 ZSWIM1Q9BR11 485 aa14.24□□□□□ -0.13
EXT1-203ENST00000437196 RHOBTB2Q9BYZ6 727 aa14.24□□□□□ -0.13
EXT1-203ENST00000437196 FBXO44Q9H4M3 255 aa14.24□□□□□ -0.13
EXT1-203ENST00000437196 UXTQ9UBK9 157 aaPredicted RBP14.24□□□□□ -0.13
EXT1-203ENST00000437196 FGF19O95750 216 aa14.23□□□□□ -0.13
EXT1-203ENST00000437196 CDH5P33151 784 aaPredicted RBP14.23□□□□□ -0.13
EXT1-203ENST00000437196 FMO1Q01740 532 aa14.23□□□□□ -0.13
EXT1-203ENST00000437196 ITIH3Q06033 890 aa14.23□□□□□ -0.13
EXT1-203ENST00000437196 COL19A1Q14993 1142 aa14.23□□□□□ -0.13
EXT1-203ENST00000437196 DDR2Q16832 855 aa14.23□□□□□ -0.13
EXT1-203ENST00000437196 CTC1Q2NKJ3 1217 aa14.23□□□□□ -0.13
EXT1-203ENST00000437196 E4F1Q66K89 784 aaPredicted RBP14.23□□□□□ -0.13
EXT1-203ENST00000437196 HGSNATQ68CP4 663 aa14.23□□□□□ -0.13
EXT1-203ENST00000437196 PIGZQ86VD9 579 aa14.23□□□□□ -0.13
EXT1-203ENST00000437196 TMTC1Q8IUR5 882 aa14.23□□□□□ -0.13
EXT1-203ENST00000437196 NUP93Q8N1F7 819 aa14.23□□□□□ -0.13
EXT1-203ENST00000437196 IPO4Q8TEX9 1081 aaKnown RBP14.23□□□□□ -0.13
EXT1-203ENST00000437196 SLC20A1Q8WUM9 679 aa14.23□□□□□ -0.13
EXT1-203ENST00000437196 SLC35F5Q8WV83 523 aa14.23□□□□□ -0.13
EXT1-203ENST00000437196 KCTD13Q8WZ19 329 aa14.23□□□□□ -0.13
EXT1-203ENST00000437196 PSMG2Q969U7 264 aa14.23□□□□□ -0.13
EXT1-203ENST00000437196 KCNK16Q96T55 309 aa14.23□□□□□ -0.13
EXT1-203ENST00000437196 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.23□□□□□ -0.13
EXT1-203ENST00000437196 PRKD2Q9BZL6 878 aa14.23□□□□□ -0.13
EXT1-203ENST00000437196 CRISPLD1Q9H336 500 aa14.23□□□□□ -0.13
EXT1-203ENST00000437196 SYNCQ9H7C4 482 aa14.23□□□□□ -0.13
EXT1-203ENST00000437196 LRRC4Q9HBW1 653 aa14.23□□□□□ -0.13
EXT1-203ENST00000437196 CLDND1Q9NY35 253 aa14.23□□□□□ -0.13
EXT1-203ENST00000437196 CCDC195A0A1B0GUA6 201 aa14.22□□□□□ -0.13
EXT1-203ENST00000437196 SART1O43290 800 aaKnown RBP14.22□□□□□ -0.13
EXT1-203ENST00000437196 PAPLNO95428 1278 aa14.22□□□□□ -0.13
EXT1-203ENST00000437196 CALCAP01258 141 aa14.22□□□□□ -0.13
EXT1-203ENST00000437196 CYP1A1P04798 512 aaPredicted RBP14.22□□□□□ -0.13
EXT1-203ENST00000437196 GZMAP12544 262 aa14.22□□□□□ -0.13
EXT1-203ENST00000437196 SKILP12757 684 aa14.22□□□□□ -0.13
EXT1-203ENST00000437196 ATF6P18850 670 aa14.22□□□□□ -0.13
EXT1-203ENST00000437196 GTF2F1P35269 517 aaKnown RBP eCLIP14.22□□□□□ -0.133e-6■■■■□ 22.4
EXT1-203ENST00000437196 NSFP46459 744 aaKnown RBP14.22□□□□□ -0.13
EXT1-203ENST00000437196 PPP3CCP48454 512 aa14.22□□□□□ -0.13
EXT1-203ENST00000437196 MAPK8IP2Q13387 824 aaPredicted RBP14.22□□□□□ -0.13
EXT1-203ENST00000437196 CES5AQ6NT32 575 aa14.22□□□□□ -0.13
EXT1-203ENST00000437196 ANKRD54Q6NXT1 300 aa14.22□□□□□ -0.13
EXT1-203ENST00000437196 DENND1BQ6P3S1 775 aa14.22□□□□□ -0.13
EXT1-203ENST00000437196 WDR59Q6PJI9 974 aa14.22□□□□□ -0.13
EXT1-203ENST00000437196 EP400NLQ6ZTU2 488 aa14.22□□□□□ -0.13
EXT1-203ENST00000437196 ZNF571Q7Z3V5 609 aaPredicted RBP14.22□□□□□ -0.13
EXT1-203ENST00000437196 PASD1Q8IV76 773 aa14.22□□□□□ -0.13
EXT1-203ENST00000437196 CCDC170Q8IYT3 715 aa14.22□□□□□ -0.13
EXT1-203ENST00000437196 SIX6OS1Q8N1H7 587 aa14.22□□□□□ -0.13
EXT1-203ENST00000437196 TTC9BQ8N6N2 239 aa14.22□□□□□ -0.13
EXT1-203ENST00000437196 CCDC112Q8NEF3 446 aa14.22□□□□□ -0.13
EXT1-203ENST00000437196 PIDD1Q9HB75 910 aa14.22□□□□□ -0.13
EXT1-203ENST00000437196 ST7Q9NRC1 585 aa14.22□□□□□ -0.13
EXT1-203ENST00000437196 BRWD1Q9NSI6 2320 aa14.21□□□□□ -0.13
EXT1-203ENST00000437196 SLC38A8A6NNN8 435 aa14.21□□□□□ -0.13
EXT1-203ENST00000437196 AKR1B10O60218 316 aa14.21□□□□□ -0.13
EXT1-203ENST00000437196 BEST1O76090 585 aa14.21□□□□□ -0.13
EXT1-203ENST00000437196 FBXO21O94952 628 aa14.21□□□□□ -0.13
EXT1-203ENST00000437196 IPO7O95373 1038 aaKnown RBP14.21□□□□□ -0.13
EXT1-203ENST00000437196 GLP2RO95838 553 aa14.21□□□□□ -0.13
EXT1-203ENST00000437196 PTMAP06454 111 aaKnown RBP14.21□□□□□ -0.13
EXT1-203ENST00000437196 PTPN2P17706 415 aa14.21□□□□□ -0.13
EXT1-203ENST00000437196 CHRNB2P17787 502 aa14.21□□□□□ -0.13
EXT1-203ENST00000437196 CYLC1P35663 651 aaPredicted RBP14.21□□□□□ -0.13
EXT1-203ENST00000437196 CDR1P51861 262 aa14.21□□□□□ -0.13
EXT1-203ENST00000437196 SLC5A3P53794 718 aa14.21□□□□□ -0.13
EXT1-203ENST00000437196 NOMO3P69849 1222 aa14.21□□□□□ -0.13
EXT1-203ENST00000437196 CCDC173Q0VFZ6 552 aa14.21□□□□□ -0.13
EXT1-203ENST00000437196 PDCLQ13371 301 aa14.21□□□□□ -0.13
EXT1-203ENST00000437196 SKIV2LQ15477 1246 aaKnown RBP14.21□□□□□ -0.13
EXT1-203ENST00000437196 CLEC16AQ2KHT3 1053 aa14.21□□□□□ -0.13
EXT1-203ENST00000437196 PABPC1LQ4VXU2 614 aaKnown RBP14.21□□□□□ -0.13
EXT1-203ENST00000437196 CYP4A22Q5TCH4 519 aa14.21□□□□□ -0.13
EXT1-203ENST00000437196 CCDC186Q7Z3E2 898 aa14.21□□□□□ -0.13
EXT1-203ENST00000437196 ERICH1Q86X53 443 aa14.21□□□□□ -0.13
EXT1-203ENST00000437196 ZDHHC17Q8IUH5 632 aa14.21□□□□□ -0.13
EXT1-203ENST00000437196 GPIHBP1Q8IV16 184 aa14.21□□□□□ -0.13
EXT1-203ENST00000437196 C1orf131Q8NDD1 294 aaKnown RBP14.21□□□□□ -0.13
EXT1-203ENST00000437196 PDZD8Q8NEN9 1154 aa14.21□□□□□ -0.13
EXT1-203ENST00000437196 ZMIZ2Q8NF64 920 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms