RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 SYF2O95926 243 aaKnown RBP22.2■■□□□ 1.14
PTPRF-207ENST00000436724 ITGB1P05556 798 aa22.2■■□□□ 1.14
PTPRF-207ENST00000436724 SETSIPP0DME0 302 aa22.2■■□□□ 1.14
PTPRF-207ENST00000436724 TNFRSF8P28908 595 aa22.2■■□□□ 1.14
PTPRF-207ENST00000436724 KCNJ1P48048 391 aa22.2■■□□□ 1.14
PTPRF-207ENST00000436724 AARSP49588 968 aaKnown RBP eCLIP22.2■■□□□ 1.143e-8■■■■■ 82.4
PTPRF-207ENST00000436724 ATN1P54259 1190 aaPredicted RBP22.2■■□□□ 1.14
PTPRF-207ENST00000436724 MDH1BQ5I0G3 518 aa22.2■■□□□ 1.14
PTPRF-207ENST00000436724 KCNT1Q5JUK3 1230 aa22.2■■□□□ 1.14
PTPRF-207ENST00000436724 CD300LGQ6UXG3 332 aa22.2■■□□□ 1.14
PTPRF-207ENST00000436724 ATG4AQ8WYN0 398 aa22.2■■□□□ 1.14
PTPRF-207ENST00000436724 RAPGEF5Q92565 580 aa22.2■■□□□ 1.14
PTPRF-207ENST00000436724 TRIM31Q9BZY9 425 aa22.2■■□□□ 1.14
PTPRF-207ENST00000436724 ZWILCHQ9H900 591 aa22.2■■□□□ 1.14
PTPRF-207ENST00000436724 UBN1Q9NPG3 1134 aa22.2■■□□□ 1.14
PTPRF-207ENST00000436724 CRTAC1Q9NQ79 661 aa22.2■■□□□ 1.14
PTPRF-207ENST00000436724 BEST1O76090 585 aa22.19■■□□□ 1.14
PTPRF-207ENST00000436724 KRT1P04264 644 aa22.19■■□□□ 1.14
PTPRF-207ENST00000436724 SLC25A11Q02978 314 aaKnown RBP22.19■■□□□ 1.14
PTPRF-207ENST00000436724 ADCY2Q08462 1091 aa22.19■■□□□ 1.14
PTPRF-207ENST00000436724 TUSC3Q13454 348 aa22.19■■□□□ 1.14
PTPRF-207ENST00000436724 CLLU1OSQ5K130 101 aa22.19■■□□□ 1.14
PTPRF-207ENST00000436724 CCDC137Q6PK04 289 aaKnown RBP22.19■■□□□ 1.14
PTPRF-207ENST00000436724 PAQR9Q6ZVX9 377 aa22.19■■□□□ 1.14
PTPRF-207ENST00000436724 RXFP2Q8WXD0 754 aa22.19■■□□□ 1.14
PTPRF-207ENST00000436724 OSBPL8Q9BZF1 889 aa22.19■■□□□ 1.14
PTPRF-207ENST00000436724 ACBD3Q9H3P7 528 aa22.19■■□□□ 1.14
PTPRF-207ENST00000436724 MED4Q9NPJ6 270 aa22.19■■□□□ 1.14
PTPRF-207ENST00000436724 PCSK1NQ9UHG2 260 aa22.19■■□□□ 1.14
PTPRF-207ENST00000436724 LCMT1Q9UIC8 334 aa22.19■■□□□ 1.14
PTPRF-207ENST00000436724 C2CD4BA6NLJ0 364 aa22.19■■□□□ 1.14
PTPRF-207ENST00000436724 FAM153BP0C7A2 387 aa22.19■■□□□ 1.14
PTPRF-207ENST00000436724 KRT10P13645 584 aa22.19■■□□□ 1.14
PTPRF-207ENST00000436724 LCP1P13796 627 aa22.19■■□□□ 1.14
PTPRF-207ENST00000436724 C15orf59Q2T9L4 293 aaPredicted RBP22.19■■□□□ 1.14
PTPRF-207ENST00000436724 FAM153CQ494X1 144 aa22.19■■□□□ 1.14
PTPRF-207ENST00000436724 MFSD7Q6UXD7 560 aa22.19■■□□□ 1.14
PTPRF-207ENST00000436724 KHSRPQ92945 711 aaKnown RBP eCLIP22.19■■□□□ 1.14
PTPRF-207ENST00000436724 FAM118BQ9BPY3 351 aa22.19■■□□□ 1.14
PTPRF-207ENST00000436724 CHST7Q9NS84 486 aa22.19■■□□□ 1.14
PTPRF-207ENST00000436724 CALCOCO1Q9P1Z2 691 aa22.19■■□□□ 1.14
PTPRF-207ENST00000436724 FAM153AQ9UHL3 310 aa22.19■■□□□ 1.14
PTPRF-207ENST00000436724 R3HDM2Q9Y2K5 976 aaKnown RBP22.19■■□□□ 1.14
PTPRF-207ENST00000436724 TET1Q8NFU7 2136 aa22.19■■□□□ 1.14
PTPRF-207ENST00000436724 PDGFRAP16234 1089 aa22.18■■□□□ 1.14
PTPRF-207ENST00000436724 CHRNA3P32297 505 aa22.18■■□□□ 1.14
PTPRF-207ENST00000436724 LMAN1P49257 510 aa22.18■■□□□ 1.14
PTPRF-207ENST00000436724 KLF1Q13351 362 aaPredicted RBP22.18■■□□□ 1.14
PTPRF-207ENST00000436724 SNX1Q13596 522 aa22.18■■□□□ 1.14
PTPRF-207ENST00000436724 CYP1B1Q16678 543 aa22.18■■□□□ 1.14
PTPRF-207ENST00000436724 CDO1Q16878 200 aa22.18■■□□□ 1.14
PTPRF-207ENST00000436724 HSP90B2PQ58FF3 399 aa22.18■■□□□ 1.14
PTPRF-207ENST00000436724 LRRC38Q5VT99 294 aa22.18■■□□□ 1.14
PTPRF-207ENST00000436724 KAZNQ674X7 775 aa22.18■■□□□ 1.14
PTPRF-207ENST00000436724 SND1Q7KZF4 910 aaKnown RBP eCLIP22.18■■□□□ 1.14
PTPRF-207ENST00000436724 ZNF280BQ86YH2 543 aa22.18■■□□□ 1.14
PTPRF-207ENST00000436724 DBF4BQ8NFT6 615 aa22.18■■□□□ 1.14
PTPRF-207ENST00000436724 STK32AQ8WU08 396 aa22.18■■□□□ 1.14
PTPRF-207ENST00000436724 CFAP57Q96MR6 1250 aa22.18■■□□□ 1.14
PTPRF-207ENST00000436724 SLITRK1Q96PX8 696 aa22.18■■□□□ 1.14
PTPRF-207ENST00000436724 HNRNPABQ99729 332 aaKnown RBP22.18■■□□□ 1.14
PTPRF-207ENST00000436724 DPH5Q9H2P9 285 aa22.18■■□□□ 1.14
PTPRF-207ENST00000436724 OGDHLQ9ULD0 1010 aa22.18■■□□□ 1.14
PTPRF-207ENST00000436724 DAPK3O43293 454 aa22.18■■□□□ 1.14
PTPRF-207ENST00000436724 ZNF143P52747 638 aaPredicted RBP22.18■■□□□ 1.14
PTPRF-207ENST00000436724 RABGGTBP53611 331 aa22.18■■□□□ 1.14
PTPRF-207ENST00000436724 SLC6A3Q01959 620 aa22.18■■□□□ 1.14
PTPRF-207ENST00000436724 MYBPHLA2RUH7 354 aa22.17■■□□□ 1.14
PTPRF-207ENST00000436724 LRRD1A4D1F6 860 aa22.17■■□□□ 1.14
PTPRF-207ENST00000436724 BHMG1C9JSJ3 638 aaPredicted RBP22.17■■□□□ 1.14
PTPRF-207ENST00000436724 DDHD2O94830 711 aa22.17■■□□□ 1.14
PTPRF-207ENST00000436724 GPD1P21695 349 aa22.17■■□□□ 1.14
PTPRF-207ENST00000436724 ECHS1P30084 290 aa22.17■■□□□ 1.14
PTPRF-207ENST00000436724 COILP38432 576 aaPredicted RBP22.17■■□□□ 1.14
PTPRF-207ENST00000436724 PTGIRP43119 386 aa22.17■■□□□ 1.14
PTPRF-207ENST00000436724 LHX1P48742 406 aa22.17■■□□□ 1.14
PTPRF-207ENST00000436724 PPP2R5EQ16537 467 aa22.17■■□□□ 1.14
PTPRF-207ENST00000436724 GLB1LQ6UWU2 654 aa22.17■■□□□ 1.14
PTPRF-207ENST00000436724 JAMLQ86YT9 394 aa22.17■■□□□ 1.14
PTPRF-207ENST00000436724 TMEM86AQ8N2M4 240 aa22.17■■□□□ 1.14
PTPRF-207ENST00000436724 SYT15Q9BQS2 421 aa22.17■■□□□ 1.14
PTPRF-207ENST00000436724 EOMESO95936 686 aa22.16■■□□□ 1.14
PTPRF-207ENST00000436724 MIPP30301 263 aa22.16■■□□□ 1.14
PTPRF-207ENST00000436724 EPHB4P54760 987 aa22.16■■□□□ 1.14
PTPRF-207ENST00000436724 ATP11AP98196 1134 aa22.16■■□□□ 1.14
PTPRF-207ENST00000436724 HLTFQ14527 1009 aaKnown RBP eCLIP22.16■■□□□ 1.14
PTPRF-207ENST00000436724 PIGZQ86VD9 579 aa22.16■■□□□ 1.14
PTPRF-207ENST00000436724 CCDC105Q8IYK2 499 aa22.16■■□□□ 1.14
PTPRF-207ENST00000436724 RCOR2Q8IZ40 523 aa22.16■■□□□ 1.14
PTPRF-207ENST00000436724 MED10Q9BTT4 135 aa22.16■■□□□ 1.14
PTPRF-207ENST00000436724 NEUROG2Q9H2A3 272 aa22.16■■□□□ 1.14
PTPRF-207ENST00000436724 PCYOX1Q9UHG3 505 aa22.16■■□□□ 1.14
PTPRF-207ENST00000436724 UTP11Q9Y3A2 253 aaKnown RBP22.16■■□□□ 1.14
PTPRF-207ENST00000436724 FAM163BP0C2L3 166 aa22.16■■□□□ 1.14
PTPRF-207ENST00000436724 FAM189BP81408 668 aa22.16■■□□□ 1.14
PTPRF-207ENST00000436724 BFSP2Q13515 415 aa22.16■■□□□ 1.14
PTPRF-207ENST00000436724 CCDC14Q49A88 953 aa22.16■■□□□ 1.14
PTPRF-207ENST00000436724 NDRG1Q92597 394 aaKnown RBP22.16■■□□□ 1.14
PTPRF-207ENST00000436724 PCED1BQ96HM7 432 aa22.16■■□□□ 1.14
PTPRF-207ENST00000436724 RTP3Q9BQQ7 232 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms