RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 MMRN1Q13201 1228 aa10.91□□□□□ -0.66
CLSTN1-203ENST00000435891 HIF1AQ16665 826 aa10.91□□□□□ -0.66
CLSTN1-203ENST00000435891 MPZL3Q6UWV2 235 aa10.91□□□□□ -0.66
CLSTN1-203ENST00000435891 KLHL29Q96CT2 875 aa10.91□□□□□ -0.66
CLSTN1-203ENST00000435891 PPP1R12CQ9BZL4 782 aa10.91□□□□□ -0.66
CLSTN1-203ENST00000435891 ZNF518BQ9C0D4 1074 aa10.91□□□□□ -0.66
CLSTN1-203ENST00000435891 ASCC2Q9H1I8 757 aaPredicted RBP10.91□□□□□ -0.66
CLSTN1-203ENST00000435891 TXNRD2Q9NNW7 524 aa10.91□□□□□ -0.66
CLSTN1-203ENST00000435891 RABGEF1Q9UJ41 708 aa10.91□□□□□ -0.66
CLSTN1-203ENST00000435891 CA4P22748 312 aa10.91□□□□□ -0.66
CLSTN1-203ENST00000435891 KDELR1P24390 212 aa10.91□□□□□ -0.66
CLSTN1-203ENST00000435891 IL9RQ01113 521 aa10.91□□□□□ -0.66
CLSTN1-203ENST00000435891 GRM1Q13255 1194 aa10.91□□□□□ -0.66
CLSTN1-203ENST00000435891 TAF11Q15544 211 aa10.91□□□□□ -0.66
CLSTN1-203ENST00000435891 NOL9Q5SY16 702 aaKnown RBP10.91□□□□□ -0.66
CLSTN1-203ENST00000435891 NPNTQ6UXI9 565 aa10.91□□□□□ -0.66
CLSTN1-203ENST00000435891 DPH6Q7L8W6 267 aa10.91□□□□□ -0.66
CLSTN1-203ENST00000435891 XYLT1Q86Y38 959 aa10.91□□□□□ -0.66
CLSTN1-203ENST00000435891 TDRPQ86YL5 185 aa10.91□□□□□ -0.66
CLSTN1-203ENST00000435891 ZBTB8OSQ8IWT0 167 aa10.91□□□□□ -0.66
CLSTN1-203ENST00000435891 FBXO16Q8IX29 292 aaPredicted RBP10.91□□□□□ -0.66
CLSTN1-203ENST00000435891 CCHCR1Q8TD31 782 aa10.91□□□□□ -0.66
CLSTN1-203ENST00000435891 OSBPL1AQ9BXW6 950 aa10.91□□□□□ -0.66
CLSTN1-203ENST00000435891 FOXP3Q9BZS1 431 aa10.91□□□□□ -0.66
CLSTN1-203ENST00000435891 CDT1Q9H211 546 aa10.91□□□□□ -0.66
CLSTN1-203ENST00000435891 PHTF1Q9UMS5 762 aa10.91□□□□□ -0.66
CLSTN1-203ENST00000435891 SHOC2Q9UQ13 582 aa10.91□□□□□ -0.66
CLSTN1-203ENST00000435891 C15orf41Q9Y2V0 281 aa10.91□□□□□ -0.66
CLSTN1-203ENST00000435891 ANK1P16157 1881 aa10.91□□□□□ -0.66
CLSTN1-203ENST00000435891 GOLGA8RI6L899 631 aa10.91□□□□□ -0.66
CLSTN1-203ENST00000435891 TYROBPO43914 113 aa10.91□□□□□ -0.66
CLSTN1-203ENST00000435891 TMEM132AQ24JP5 1023 aa10.91□□□□□ -0.66
CLSTN1-203ENST00000435891 PPP1R2P3Q6NXS1 205 aa10.91□□□□□ -0.66
CLSTN1-203ENST00000435891 GADL1Q6ZQY3 521 aa10.91□□□□□ -0.66
CLSTN1-203ENST00000435891 TSHZ1Q6ZSZ6 1077 aa10.91□□□□□ -0.66
CLSTN1-203ENST00000435891 CENPUQ71F23 418 aa10.91□□□□□ -0.66
CLSTN1-203ENST00000435891 IGDCC3Q8IVU1 814 aa10.91□□□□□ -0.66
CLSTN1-203ENST00000435891 RIBC1Q8N443 379 aaPredicted RBP10.91□□□□□ -0.66
CLSTN1-203ENST00000435891 NAT8LQ8N9F0 302 aa10.91□□□□□ -0.66
CLSTN1-203ENST00000435891 FAM71DQ8N9W8 422 aa10.91□□□□□ -0.66
CLSTN1-203ENST00000435891 SLC4A11Q8NBS3 891 aa10.91□□□□□ -0.66
CLSTN1-203ENST00000435891 HSPH1Q92598 858 aa10.91□□□□□ -0.66
CLSTN1-203ENST00000435891 PEBP4Q96S96 227 aa10.91□□□□□ -0.66
CLSTN1-203ENST00000435891 ELOVL4Q9GZR5 314 aa10.91□□□□□ -0.66
CLSTN1-203ENST00000435891 DDX56Q9NY93 547 aaKnown RBP10.91□□□□□ -0.66
CLSTN1-203ENST00000435891 KLHL14Q9P2G3 628 aa10.91□□□□□ -0.66
CLSTN1-203ENST00000435891 PTPRFP10586 1907 aa10.9□□□□□ -0.66
CLSTN1-203ENST00000435891 KRT4P19013 534 aa10.9□□□□□ -0.66
CLSTN1-203ENST00000435891 MIPP30301 263 aa10.9□□□□□ -0.66
CLSTN1-203ENST00000435891 ZNF268Q14587 947 aaPredicted RBP10.9□□□□□ -0.66
CLSTN1-203ENST00000435891 Q3C1V9 767 aa10.9□□□□□ -0.66
CLSTN1-203ENST00000435891 GJC2Q5T442 439 aaPredicted RBP10.9□□□□□ -0.66
CLSTN1-203ENST00000435891 TRNP1Q6NT89 227 aa10.9□□□□□ -0.66
CLSTN1-203ENST00000435891 ASRGL1Q7L266 308 aa10.9□□□□□ -0.66
CLSTN1-203ENST00000435891 AGAP11Q8TF27 550 aa10.9□□□□□ -0.66
CLSTN1-203ENST00000435891 LRRN4Q8WUT4 740 aa10.9□□□□□ -0.66
CLSTN1-203ENST00000435891 EZH1Q92800 747 aaPredicted RBP10.9□□□□□ -0.66
CLSTN1-203ENST00000435891 TTC25Q96NG3 672 aa10.9□□□□□ -0.66
CLSTN1-203ENST00000435891 MYLK2Q9H1R3 596 aa10.9□□□□□ -0.66
CLSTN1-203ENST00000435891 FZD8Q9H461 694 aa10.9□□□□□ -0.66
CLSTN1-203ENST00000435891 UBN1Q9NPG3 1134 aa10.9□□□□□ -0.66
CLSTN1-203ENST00000435891 PDGFCQ9NRA1 345 aa10.9□□□□□ -0.66
CLSTN1-203ENST00000435891 GPRC5DQ9NZD1 345 aa10.9□□□□□ -0.66
CLSTN1-203ENST00000435891 CHKBQ9Y259 395 aa10.9□□□□□ -0.66
CLSTN1-203ENST00000435891 WDR91A4D1P6 747 aa10.9□□□□□ -0.66
CLSTN1-203ENST00000435891 NOP56O00567 594 aaKnown RBP10.9□□□□□ -0.66
CLSTN1-203ENST00000435891 ACKR2O00590 384 aa10.9□□□□□ -0.66
CLSTN1-203ENST00000435891 PRPF4O43172 522 aaKnown RBP eCLIP10.9□□□□□ -0.665e-6■■■□□ 18.8
CLSTN1-203ENST00000435891 B4GALT4O60513 344 aa10.9□□□□□ -0.66
CLSTN1-203ENST00000435891 ITGB3P05106 788 aa10.9□□□□□ -0.66
CLSTN1-203ENST00000435891 MXD4Q14582 209 aaPredicted RBP10.9□□□□□ -0.66
CLSTN1-203ENST00000435891 POLNQ7Z5Q5 900 aa10.9□□□□□ -0.66
CLSTN1-203ENST00000435891 FBXO36Q8NEA4 188 aa10.9□□□□□ -0.66
CLSTN1-203ENST00000435891 UBA3Q8TBC4 463 aa10.9□□□□□ -0.66
CLSTN1-203ENST00000435891 SMC6Q96SB8 1091 aa10.9□□□□□ -0.66
CLSTN1-203ENST00000435891 NUMBLQ9Y6R0 609 aa10.9□□□□□ -0.66
CLSTN1-203ENST00000435891 PAPPA2Q9BXP8 1791 aa10.9□□□□□ -0.66
CLSTN1-203ENST00000435891 CFAP73A6NFT4 308 aa10.9□□□□□ -0.67
CLSTN1-203ENST00000435891 CNMDO75829 334 aa10.9□□□□□ -0.67
CLSTN1-203ENST00000435891 BAG6P46379 1132 aa10.9□□□□□ -0.67
CLSTN1-203ENST00000435891 YWHAEP62258 255 aaKnown RBP10.9□□□□□ -0.67
CLSTN1-203ENST00000435891 IGBP1P78318 339 aa10.9□□□□□ -0.67
CLSTN1-203ENST00000435891 MBTD1Q05BQ5 628 aa10.9□□□□□ -0.67
CLSTN1-203ENST00000435891 MKRN3Q13064 507 aaKnown RBP10.9□□□□□ -0.67
CLSTN1-203ENST00000435891 MOGSQ13724 837 aa10.9□□□□□ -0.67
CLSTN1-203ENST00000435891 EFHC2Q5JST6 749 aa10.9□□□□□ -0.67
CLSTN1-203ENST00000435891 RNF43Q68DV7 783 aa10.9□□□□□ -0.67
CLSTN1-203ENST00000435891 TLDC1Q6P9B6 456 aa10.9□□□□□ -0.67
CLSTN1-203ENST00000435891 C3orf62Q6ZUJ4 267 aa10.9□□□□□ -0.67
CLSTN1-203ENST00000435891 BBS12Q6ZW61 710 aa10.9□□□□□ -0.67
CLSTN1-203ENST00000435891 UTP4Q969X6 686 aaKnown RBP10.9□□□□□ -0.67
CLSTN1-203ENST00000435891 ANKRD36BP1Q96IX9 119 aa10.9□□□□□ -0.67
CLSTN1-203ENST00000435891 CALN1Q9BXU9 219 aa10.9□□□□□ -0.67
CLSTN1-203ENST00000435891 RNPEPQ9H4A4 650 aa10.9□□□□□ -0.67
CLSTN1-203ENST00000435891 ARHGEF3Q9NR81 526 aa10.9□□□□□ -0.67
CLSTN1-203ENST00000435891 RPS6KL1Q9Y6S9 549 aa10.9□□□□□ -0.67
CLSTN1-203ENST00000435891 LACTBL1A8MY62 500 aa10.89□□□□□ -0.67
CLSTN1-203ENST00000435891 GRAP2O75791 330 aa10.89□□□□□ -0.67
CLSTN1-203ENST00000435891 MAP3K6O95382 1288 aa10.89□□□□□ -0.67
CLSTN1-203ENST00000435891 TNNC2P02585 160 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms