RNA–Protein interactions for RNA: ENST00000435050.1

CLDN4-203, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-203ENST00000435050 SLC2A14Q8TDB8 520 aa12.74□□□□□ -0.37
CLDN4-203ENST00000435050 ZNF473Q8WTR7 871 aaKnown RBP12.74□□□□□ -0.37
CLDN4-203ENST00000435050 GAD1Q99259 594 aa12.74□□□□□ -0.37
CLDN4-203ENST00000435050 XYLT2Q9H1B5 865 aa12.74□□□□□ -0.37
CLDN4-203ENST00000435050 CHMP2BQ9UQN3 213 aa12.74□□□□□ -0.37
CLDN4-203ENST00000435050 CAPN7Q9Y6W3 813 aa12.74□□□□□ -0.37
CLDN4-203ENST00000435050 I3L4J1 428 aa12.74□□□□□ -0.37
CLDN4-203ENST00000435050 TULP2O00295 520 aa12.74□□□□□ -0.37
CLDN4-203ENST00000435050 CILPO75339 1184 aa12.74□□□□□ -0.37
CLDN4-203ENST00000435050 APRTP07741 180 aa12.74□□□□□ -0.37
CLDN4-203ENST00000435050 ARL4CP56559 192 aa12.74□□□□□ -0.37
CLDN4-203ENST00000435050 CAV1Q03135 178 aa12.74□□□□□ -0.37
CLDN4-203ENST00000435050 PTGISQ16647 500 aa12.74□□□□□ -0.37
CLDN4-203ENST00000435050 TRMT10CQ7L0Y3 403 aaKnown RBP12.74□□□□□ -0.37
CLDN4-203ENST00000435050 MSL3Q8N5Y2 521 aaKnown RBP12.74□□□□□ -0.37
CLDN4-203ENST00000435050 NDRG1Q92597 394 aaKnown RBP12.74□□□□□ -0.37
CLDN4-203ENST00000435050 KATNAL1Q9BW62 490 aa12.74□□□□□ -0.37
CLDN4-203ENST00000435050 RASSF4Q9H2L5 321 aa12.74□□□□□ -0.37
CLDN4-203ENST00000435050 RNF39Q9H2S5 420 aa12.74□□□□□ -0.37
CLDN4-203ENST00000435050 GRHL1Q9NZI5 618 aa12.74□□□□□ -0.37
CLDN4-203ENST00000435050 IGKV6-21A0A0C4DH24 114 aa12.74□□□□□ -0.37
CLDN4-203ENST00000435050 SIGLEC16A6NMB1 481 aa12.74□□□□□ -0.37
CLDN4-203ENST00000435050 CD4P01730 458 aa12.74□□□□□ -0.37
CLDN4-203ENST00000435050 PECAM1P16284 738 aaPredicted RBP12.74□□□□□ -0.37
CLDN4-203ENST00000435050 ZDHHC24Q6UX98 284 aa12.74□□□□□ -0.37
CLDN4-203ENST00000435050 PAF1Q8N7H5 531 aa12.74□□□□□ -0.37
CLDN4-203ENST00000435050 PIK3R5Q8WYR1 880 aa12.74□□□□□ -0.37
CLDN4-203ENST00000435050 MS4A4AQ96JQ5 239 aa12.74□□□□□ -0.37
CLDN4-203ENST00000435050 PTPN18Q99952 460 aa12.74□□□□□ -0.37
CLDN4-203ENST00000435050 EPN3Q9H201 632 aa12.74□□□□□ -0.37
CLDN4-203ENST00000435050 WHRNQ9P202 907 aa12.74□□□□□ -0.37
CLDN4-203ENST00000435050 DOCK5Q9H7D0 1870 aa12.74□□□□□ -0.37
CLDN4-203ENST00000435050 KPNA7A9QM74 516 aa12.73□□□□□ -0.37
CLDN4-203ENST00000435050 PPFIA2O75334 1257 aa12.73□□□□□ -0.37
CLDN4-203ENST00000435050 LRCH4O75427 683 aa12.73□□□□□ -0.37
CLDN4-203ENST00000435050 GHRP10912 638 aa12.73□□□□□ -0.37
CLDN4-203ENST00000435050 PHBP35232 272 aa12.73□□□□□ -0.37
CLDN4-203ENST00000435050 RABGGTBP53611 331 aa12.73□□□□□ -0.37
CLDN4-203ENST00000435050 NRLP54845 237 aa12.73□□□□□ -0.37
CLDN4-203ENST00000435050 CNGA2Q16280 664 aa12.73□□□□□ -0.37
CLDN4-203ENST00000435050 AGBL2Q5U5Z8 902 aa12.73□□□□□ -0.37
CLDN4-203ENST00000435050 ADGRF2Q8IZF7 708 aa12.73□□□□□ -0.37
CLDN4-203ENST00000435050 CD101Q93033 1021 aa12.73□□□□□ -0.37
CLDN4-203ENST00000435050 TNIP3Q96KP6 325 aa12.73□□□□□ -0.37
CLDN4-203ENST00000435050 DPEP3Q9H4B8 488 aa12.73□□□□□ -0.37
CLDN4-203ENST00000435050 CNOT10Q9H9A5 744 aaKnown RBP12.73□□□□□ -0.37
CLDN4-203ENST00000435050 PDE4DIPQ5VU43 2346 aa12.73□□□□□ -0.37
CLDN4-203ENST00000435050 CYB561D2O14569 222 aa12.73□□□□□ -0.37
CLDN4-203ENST00000435050 POMCP01189 267 aa12.73□□□□□ -0.37
CLDN4-203ENST00000435050 SULT1E1P49888 294 aa12.73□□□□□ -0.37
CLDN4-203ENST00000435050 RNASELQ05823 741 aaKnown RBP12.73□□□□□ -0.37
CLDN4-203ENST00000435050 SYDE1Q6ZW31 735 aaPredicted RBP12.73□□□□□ -0.37
CLDN4-203ENST00000435050 ADAM32Q8TC27 787 aa12.73□□□□□ -0.37
CLDN4-203ENST00000435050 SMC6Q96SB8 1091 aa12.73□□□□□ -0.37
CLDN4-203ENST00000435050 CNPY3Q9BT09 278 aa12.73□□□□□ -0.37
CLDN4-203ENST00000435050 MAF1Q9H063 256 aa12.73□□□□□ -0.37
CLDN4-203ENST00000435050 CLDN5O00501 218 aa12.73□□□□□ -0.37
CLDN4-203ENST00000435050 MSH2P43246 934 aa12.73□□□□□ -0.37
CLDN4-203ENST00000435050 VCPP55072 806 aaKnown RBP12.73□□□□□ -0.37
CLDN4-203ENST00000435050 ZNF268Q14587 947 aaPredicted RBP12.73□□□□□ -0.37
CLDN4-203ENST00000435050 SNX17Q15036 470 aa12.73□□□□□ -0.37
CLDN4-203ENST00000435050 ZC3H12AQ5D1E8 599 aaKnown RBP12.73□□□□□ -0.37
CLDN4-203ENST00000435050 ARHGEF18Q6ZSZ5 1173 aa12.73□□□□□ -0.37
CLDN4-203ENST00000435050 SH3GL2Q99962 352 aa12.73□□□□□ -0.37
CLDN4-203ENST00000435050 XPO7Q9UIA9 1087 aaKnown RBP12.73□□□□□ -0.37
CLDN4-203ENST00000435050 A0A1B0GUA9 196 aa12.73□□□□□ -0.37
CLDN4-203ENST00000435050 TMEM120BA0PK00 339 aa12.73□□□□□ -0.37
CLDN4-203ENST00000435050 APOL1O14791 398 aa12.73□□□□□ -0.37
CLDN4-203ENST00000435050 B3GAT3O94766 335 aa12.73□□□□□ -0.37
CLDN4-203ENST00000435050 HMGCRP04035 888 aa12.73□□□□□ -0.37
CLDN4-203ENST00000435050 DARSP14868 501 aaKnown RBP12.73□□□□□ -0.37
CLDN4-203ENST00000435050 MLH1P40692 756 aa12.73□□□□□ -0.37
CLDN4-203ENST00000435050 GRM5P41594 1212 aa12.73□□□□□ -0.37
CLDN4-203ENST00000435050 NUMBP49757 651 aa12.73□□□□□ -0.37
CLDN4-203ENST00000435050 UBAP2Q5T6F2 1119 aaKnown RBP12.73□□□□□ -0.37
CLDN4-203ENST00000435050 SCN4BQ8IWT1 228 aa12.73□□□□□ -0.37
CLDN4-203ENST00000435050 GLIS1Q8NBF1 620 aa12.73□□□□□ -0.37
CLDN4-203ENST00000435050 PPP1R14CQ8TAE6 165 aa12.73□□□□□ -0.37
CLDN4-203ENST00000435050 ALG13Q9NP73 1137 aaKnown RBP12.73□□□□□ -0.37
CLDN4-203ENST00000435050 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.73□□□□□ -0.37
CLDN4-203ENST00000435050 INHBAP08476 426 aa12.72□□□□□ -0.37
CLDN4-203ENST00000435050 KDELR1P24390 212 aa12.72□□□□□ -0.37
CLDN4-203ENST00000435050 ECHS1P30084 290 aa12.72□□□□□ -0.37
CLDN4-203ENST00000435050 CDC42EP1Q00587 391 aa12.72□□□□□ -0.37
CLDN4-203ENST00000435050 XYLT1Q86Y38 959 aa12.72□□□□□ -0.37
CLDN4-203ENST00000435050 TTC39CQ8N584 583 aa12.72□□□□□ -0.37
CLDN4-203ENST00000435050 CEP41Q9BYV8 373 aa12.72□□□□□ -0.37
CLDN4-203ENST00000435050 NINJ2Q9NZG7 142 aa12.72□□□□□ -0.37
CLDN4-203ENST00000435050 TXNDC16Q9P2K2 825 aa12.72□□□□□ -0.37
CLDN4-203ENST00000435050 LCMT1Q9UIC8 334 aa12.72□□□□□ -0.37
CLDN4-203ENST00000435050 C2CD2Q9Y426 696 aa12.72□□□□□ -0.37
CLDN4-203ENST00000435050 MANSC4A6NHS7 340 aaPredicted RBP12.72□□□□□ -0.37
CLDN4-203ENST00000435050 LIASO43766 372 aa12.72□□□□□ -0.37
CLDN4-203ENST00000435050 TTC4O95801 387 aa12.72□□□□□ -0.37
CLDN4-203ENST00000435050 MAP3K7CLP57077 242 aa12.72□□□□□ -0.37
CLDN4-203ENST00000435050 CLDN10P78369 228 aa12.72□□□□□ -0.37
CLDN4-203ENST00000435050 PMF1Q6P1K2 205 aa12.72□□□□□ -0.37
CLDN4-203ENST00000435050 WDTC1Q8N5D0 677 aa12.72□□□□□ -0.37
CLDN4-203ENST00000435050 OLIG1Q8TAK6 271 aa12.72□□□□□ -0.37
CLDN4-203ENST00000435050 MYCBPAPQ8TBZ2 947 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms