RNA–Protein interactions for RNA: ENST00000433762.1

COL6A3-207, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL6A3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-207ENST00000433762 KLF11O14901 512 aa14.3□□□□□ -0.12
COL6A3-207ENST00000433762 TRUB2O95900 331 aaKnown RBP14.3□□□□□ -0.12
COL6A3-207ENST00000433762 MAGEA6P43360 314 aa14.3□□□□□ -0.12
COL6A3-207ENST00000433762 SLC18A2Q05940 514 aa14.3□□□□□ -0.12
COL6A3-207ENST00000433762 PTPN11Q06124 597 aaPredicted RBP14.3□□□□□ -0.12
COL6A3-207ENST00000433762 STILQ15468 1287 aa14.3□□□□□ -0.12
COL6A3-207ENST00000433762 SEZ6Q53EL9 994 aa14.3□□□□□ -0.12
COL6A3-207ENST00000433762 OTOAQ7RTW8 1153 aa14.3□□□□□ -0.12
COL6A3-207ENST00000433762 RHPN2Q8IUC4 686 aa14.3□□□□□ -0.12
COL6A3-207ENST00000433762 PALM2Q8IXS6 379 aa14.3□□□□□ -0.12
COL6A3-207ENST00000433762 C4orf33Q8N1A6 199 aa14.3□□□□□ -0.12
COL6A3-207ENST00000433762 FBXO36Q8NEA4 188 aa14.3□□□□□ -0.12
COL6A3-207ENST00000433762 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.3□□□□□ -0.12
COL6A3-207ENST00000433762 JOSD2Q8TAC2 188 aa14.3□□□□□ -0.12
COL6A3-207ENST00000433762 STAMBPL1Q96FJ0 436 aa14.3□□□□□ -0.12
COL6A3-207ENST00000433762 ASB7Q9H672 318 aa14.3□□□□□ -0.12
COL6A3-207ENST00000433762 RPF1Q9H9Y2 349 aaKnown RBP14.3□□□□□ -0.12
COL6A3-207ENST00000433762 POLIQ9UNA4 740 aa14.3□□□□□ -0.12
COL6A3-207ENST00000433762 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.3□□□□□ -0.12
COL6A3-207ENST00000433762 SOWAHBA6NEL2 793 aa14.29□□□□□ -0.12
COL6A3-207ENST00000433762 LIN7AO14910 233 aaPredicted RBP14.29□□□□□ -0.12
COL6A3-207ENST00000433762 DNAJC6O75061 913 aa14.29□□□□□ -0.12
COL6A3-207ENST00000433762 CILPO75339 1184 aa14.29□□□□□ -0.12
COL6A3-207ENST00000433762 TOMM70O94826 608 aa14.29□□□□□ -0.12
COL6A3-207ENST00000433762 VDRP11473 427 aa14.29□□□□□ -0.12
COL6A3-207ENST00000433762 ZNF143P52747 638 aaPredicted RBP14.29□□□□□ -0.12
COL6A3-207ENST00000433762 EIF3EP60228 445 aaKnown RBP14.29□□□□□ -0.12
COL6A3-207ENST00000433762 SEPT7Q16181 437 aaKnown RBP14.29□□□□□ -0.12
COL6A3-207ENST00000433762 FNBP1LQ5T0N5 605 aa14.29□□□□□ -0.12
COL6A3-207ENST00000433762 NT5DC4Q86YG4 428 aa14.29□□□□□ -0.12
COL6A3-207ENST00000433762 KCTD6Q8NC69 237 aa14.29□□□□□ -0.12
COL6A3-207ENST00000433762 TBC1D31Q96DN5 1066 aa14.29□□□□□ -0.12
COL6A3-207ENST00000433762 GPR20Q99678 358 aa14.29□□□□□ -0.12
COL6A3-207ENST00000433762 CNPY3Q9BT09 278 aa14.29□□□□□ -0.12
COL6A3-207ENST00000433762 PRMT7Q9NVM4 692 aaPredicted RBP14.29□□□□□ -0.12
COL6A3-207ENST00000433762 CYTH4Q9UIA0 394 aa14.29□□□□□ -0.12
COL6A3-207ENST00000433762 ZNF180Q9UJW8 692 aa14.29□□□□□ -0.12
COL6A3-207ENST00000433762 A0A1W2PPM1 405 aa14.29□□□□□ -0.12
COL6A3-207ENST00000433762 LMNAP02545 664 aaKnown RBP14.29□□□□□ -0.12
COL6A3-207ENST00000433762 MCF2P10911 925 aa14.29□□□□□ -0.12
COL6A3-207ENST00000433762 CD19P15391 556 aa14.29□□□□□ -0.12
COL6A3-207ENST00000433762 GDF10P55107 478 aa14.29□□□□□ -0.12
COL6A3-207ENST00000433762 CDK18Q07002 472 aa14.29□□□□□ -0.12
COL6A3-207ENST00000433762 SF3A3Q12874 501 aaKnown RBP eCLIP14.29□□□□□ -0.12
COL6A3-207ENST00000433762 DPYSL3Q14195 570 aa14.29□□□□□ -0.12
COL6A3-207ENST00000433762 KCNJ11Q14654 390 aa14.29□□□□□ -0.12
COL6A3-207ENST00000433762 PDK2Q15119 407 aa14.29□□□□□ -0.12
COL6A3-207ENST00000433762 ANKRD22Q5VYY1 191 aa14.29□□□□□ -0.12
COL6A3-207ENST00000433762 RFX6Q8HWS3 928 aa14.29□□□□□ -0.12
COL6A3-207ENST00000433762 KIF2BQ8N4N8 673 aa14.29□□□□□ -0.12
COL6A3-207ENST00000433762 ENDOVQ8N8Q3 282 aaKnown RBP14.29□□□□□ -0.12
COL6A3-207ENST00000433762 NSMCE1Q8WV22 266 aa14.29□□□□□ -0.12
COL6A3-207ENST00000433762 SLC44A1Q8WWI5 657 aa14.29□□□□□ -0.12
COL6A3-207ENST00000433762 HAUS1Q96CS2 278 aa14.29□□□□□ -0.12
COL6A3-207ENST00000433762 APOPT1Q96IL0 206 aa14.29□□□□□ -0.12
COL6A3-207ENST00000433762 CPXM1Q96SM3 734 aa14.29□□□□□ -0.12
COL6A3-207ENST00000433762 ZWILCHQ9H900 591 aa14.29□□□□□ -0.12
COL6A3-207ENST00000433762 KIF9Q9HAQ2 790 aa14.29□□□□□ -0.12
COL6A3-207ENST00000433762 METTL5Q9NRN9 209 aaKnown RBP14.29□□□□□ -0.12
COL6A3-207ENST00000433762 MKS1Q9NXB0 559 aa14.29□□□□□ -0.12
COL6A3-207ENST00000433762 XPO7Q9UIA9 1087 aaKnown RBP14.29□□□□□ -0.12
COL6A3-207ENST00000433762 USP18Q9UMW8 372 aa14.29□□□□□ -0.12
COL6A3-207ENST00000433762 DPYSL4O14531 572 aa14.28□□□□□ -0.12
COL6A3-207ENST00000433762 HBP1O60381 514 aa14.28□□□□□ -0.12
COL6A3-207ENST00000433762 CAPN15O75808 1086 aa14.28□□□□□ -0.12
COL6A3-207ENST00000433762 RBP3P10745 1247 aa14.28□□□□□ -0.12
COL6A3-207ENST00000433762 PTPN4P29074 926 aa14.28□□□□□ -0.12
COL6A3-207ENST00000433762 MIPP30301 263 aa14.28□□□□□ -0.12
COL6A3-207ENST00000433762 NEK3P51956 506 aa14.28□□□□□ -0.12
COL6A3-207ENST00000433762 ROR1Q01973 937 aa14.28□□□□□ -0.12
COL6A3-207ENST00000433762 INCA1Q0VD86 236 aa14.28□□□□□ -0.12
COL6A3-207ENST00000433762 FSTL1Q12841 308 aa14.28□□□□□ -0.12
COL6A3-207ENST00000433762 ZNF394Q53GI3 561 aa14.28□□□□□ -0.12
COL6A3-207ENST00000433762 CELF3Q5SZQ8 465 aaKnown RBP14.28□□□□□ -0.12
COL6A3-207ENST00000433762 NLRP9Q7RTR0 991 aa14.28□□□□□ -0.12
COL6A3-207ENST00000433762 TEKT4Q8WW24 435 aa14.28□□□□□ -0.12
COL6A3-207ENST00000433762 UTP4Q969X6 686 aaKnown RBP14.28□□□□□ -0.12
COL6A3-207ENST00000433762 SLC7A6OSQ96CW6 309 aaPredicted RBP14.28□□□□□ -0.12
COL6A3-207ENST00000433762 LRRC39Q96DD0 335 aa14.28□□□□□ -0.12
COL6A3-207ENST00000433762 TMEM176AQ96HP8 235 aa14.28□□□□□ -0.12
COL6A3-207ENST00000433762 WDR83Q9BRX9 315 aaKnown RBP14.28□□□□□ -0.12
COL6A3-207ENST00000433762 SYT17Q9BSW7 474 aa14.28□□□□□ -0.12
COL6A3-207ENST00000433762 SYNCQ9H7C4 482 aa14.28□□□□□ -0.12
COL6A3-207ENST00000433762 SLCO1B3Q9NPD5 702 aa14.28□□□□□ -0.12
COL6A3-207ENST00000433762 PAK5Q9P286 719 aa14.28□□□□□ -0.12
COL6A3-207ENST00000433762 SIX4Q9UIU6 781 aa14.28□□□□□ -0.12
COL6A3-207ENST00000433762 TEX264Q9Y6I9 313 aa14.28□□□□□ -0.12
COL6A3-207ENST00000433762 PLXNA1Q9UIW2 1896 aa14.28□□□□□ -0.12
COL6A3-207ENST00000433762 GOLGA8SH3BPF8 625 aa14.27□□□□□ -0.12
COL6A3-207ENST00000433762 TRDMT1O14717 391 aaKnown RBP14.27□□□□□ -0.12
COL6A3-207ENST00000433762 IRF6O14896 467 aa14.27□□□□□ -0.12
COL6A3-207ENST00000433762 TMEM63AO94886 807 aa14.27□□□□□ -0.12
COL6A3-207ENST00000433762 SLC25A27O95847 323 aa14.27□□□□□ -0.12
COL6A3-207ENST00000433762 ERBB2P04626 1255 aa14.27□□□□□ -0.12
COL6A3-207ENST00000433762 ATP5BP06576 529 aaKnown RBP14.27□□□□□ -0.12
COL6A3-207ENST00000433762 TGM2P21980 687 aa14.27□□□□□ -0.12
COL6A3-207ENST00000433762 SSTR1P30872 391 aa14.27□□□□□ -0.12
COL6A3-207ENST00000433762 ADCY1Q08828 1119 aa14.27□□□□□ -0.12
COL6A3-207ENST00000433762 MSS51Q4VC12 460 aa14.27□□□□□ -0.12
COL6A3-207ENST00000433762 ANGEL2Q5VTE6 544 aaKnown RBP14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms