RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 EPS8L1Q8TE68 723 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 PARD3BQ8TEW8 1205 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 TRERF1Q96PN7 1200 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 TMEM237Q96Q45 408 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 AP5M1Q9H0R1 490 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 SUN2Q9UH99 717 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 MT-ND3P03897 115 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 MYL3P08590 195 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 HSPA1AP0DMV8 641 aaKnown RBP3.92□□□□□ -1.78
SHPRH-205ENST00000433355 HSPA1BP0DMV9 641 aaKnown RBP3.92□□□□□ -1.78
SHPRH-205ENST00000433355 STX1BP61266 288 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 RPS6P62753 249 aaKnown RBP3.92□□□□□ -1.78
SHPRH-205ENST00000433355 MTFR1Q15390 333 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 LRRC8BQ6P9F7 803 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 NT5DC3Q86UY8 548 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 NLRP14Q86W24 1093 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 TOP6BLQ8N6T0 577 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 ART4Q93070 314 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 PDCD2LQ9BRP1 358 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 ANAPC7Q9UJX3 599 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 ZNF451Q9Y4E5 1061 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 KPNA5O15131 536 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 PRPF4O43172 522 aaKnown RBP eCLIP3.92□□□□□ -1.78
SHPRH-205ENST00000433355 SERPINB8P50452 374 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 DUSP28Q4G0W2 176 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 FAM47AQ5JRC9 791 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 LENG9Q96B70 501 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 COA7Q96BR5 231 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 SERPINB11Q96P15 392 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 OSBPL8Q9BZF1 889 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 RXFP1Q9HBX9 757 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 ANKHQ9HCJ1 492 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 UBE2TQ9NPD8 197 aaPredicted RBP3.92□□□□□ -1.78
SHPRH-205ENST00000433355 SLC8A2Q9UPR5 921 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 ANGPTL3Q9Y5C1 460 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 ASXL3Q9C0F0 2248 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 C5orf60A6NFR6 353 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 SDR42E2A6NKP2 422 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 FSCN2O14926 492 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 MMP8P22894 467 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 MARK3P27448 753 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 FAM173BQ6P4H8 233 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 RAD9BQ6WBX8 426 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 C3orf67Q6ZVT6 689 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 OTOP1Q7RTM1 612 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 MYCBPAPQ8TBZ2 947 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 SYTL5Q8TDW5 730 aaPredicted RBP3.92□□□□□ -1.78
SHPRH-205ENST00000433355 CAPZA3Q96KX2 299 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 BLZF1Q9H2G9 400 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 VAT1LQ9HCJ6 419 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 MYOZ2Q9NPC6 264 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 DMAC2Q9NW81 257 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.92□□□□□ -1.78
SHPRH-205ENST00000433355 RWDD3Q9Y3V2 267 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 TNPO3Q9Y5L0 923 aaKnown RBP3.92□□□□□ -1.78
SHPRH-205ENST00000433355 ORC6Q9Y5N6 252 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 ASTN1O14525 1302 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 CLGNO14967 610 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 ARIH2O95376 493 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 APBA3O96018 575 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 ALAS1P13196 640 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 OCRLQ01968 901 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 ABRQ12979 859 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 GRIK2Q13002 908 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 ARHGAP17Q68EM7 881 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 USP17L6PQ6QN14 398 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 ACAD11Q709F0 780 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 C18orf25Q96B23 403 aaPredicted RBP3.92□□□□□ -1.78
SHPRH-205ENST00000433355 RTP4Q96DX8 246 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 CATSPERBQ9H7T0 1116 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 NCKIPSDQ9NZQ3 722 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 DDX20Q9UHI6 824 aaKnown RBP3.92□□□□□ -1.78
SHPRH-205ENST00000433355 SCOCQ9UIL1 159 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 ZNF148Q9UQR1 794 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 AKAP3O75969 853 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 GGCXP38435 758 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 TKTL1P51854 596 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 CDH17Q12864 832 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 TMEM270Q6UE05 265 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 SPATA21Q7Z572 469 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 PLD6Q8N2A8 252 aaKnown RBP3.92□□□□□ -1.78
SHPRH-205ENST00000433355 AGR3Q8TD06 166 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 TATDN2Q93075 761 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 ANKZF1Q9H8Y5 726 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 SCN9AQ15858 1988 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 SMIM31A0A1B0GVY4 71 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 CLASP2O75122 1294 aaKnown RBP3.92□□□□□ -1.78
SHPRH-205ENST00000433355 ATP4AP20648 1035 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 FLT3P36888 993 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 RGS2P41220 211 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 CSE1LP55060 971 aaKnown RBP3.92□□□□□ -1.78
SHPRH-205ENST00000433355 ESRRGP62508 458 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 RPL10AP62906 217 aaKnown RBP3.92□□□□□ -1.78
SHPRH-205ENST00000433355 TCF12Q99081 682 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 ADARB2Q9NS39 739 aaKnown RBP3.92□□□□□ -1.78
SHPRH-205ENST00000433355 GRID1Q9ULK0 1009 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 MAD1L1Q9Y6D9 718 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 A0A0B4J269 797 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 SIGLEC16A6NMB1 481 aa3.92□□□□□ -1.78
SHPRH-205ENST00000433355 H7C4K7 107 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms