RNA–Protein interactions for RNA: ENST00000431889.6

SMARCE1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2 BASIC

Gene SMARCE1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-205ENST00000431889 KIAA1549LQ6ZVL6 1849 aa15.22■□□□□ 0.03
SMARCE1-205ENST00000431889 CUTAO60888 179 aa15.22■□□□□ 0.03
SMARCE1-205ENST00000431889 PPP6R2O75170 966 aa15.22■□□□□ 0.03
SMARCE1-205ENST00000431889 RPP40O75818 363 aaKnown RBP15.22■□□□□ 0.03
SMARCE1-205ENST00000431889 GNL1P36915 607 aaPredicted RBP15.22■□□□□ 0.03
SMARCE1-205ENST00000431889 CYP24A1Q07973 514 aa15.22■□□□□ 0.03
SMARCE1-205ENST00000431889 EML3Q32P44 896 aa15.22■□□□□ 0.03
SMARCE1-205ENST00000431889 WDR72Q3MJ13 1102 aa15.22■□□□□ 0.03
SMARCE1-205ENST00000431889 C4orf50Q6ZRC1 276 aa15.22■□□□□ 0.03
SMARCE1-205ENST00000431889 TTC30AQ86WT1 665 aa15.22■□□□□ 0.03
SMARCE1-205ENST00000431889 CPA6Q8N4T0 437 aa15.22■□□□□ 0.03
SMARCE1-205ENST00000431889 GPR161Q8N6U8 529 aaKnown RBP15.22■□□□□ 0.03
SMARCE1-205ENST00000431889 IQUBQ8NA54 791 aa15.22■□□□□ 0.03
SMARCE1-205ENST00000431889 PLEKHO2Q8TD55 490 aa15.22■□□□□ 0.03
SMARCE1-205ENST00000431889 FNBP1Q96RU3 617 aa15.22■□□□□ 0.03
SMARCE1-205ENST00000431889 ZNF518BQ9C0D4 1074 aa15.22■□□□□ 0.03
SMARCE1-205ENST00000431889 KIF9Q9HAQ2 790 aa15.22■□□□□ 0.03
SMARCE1-205ENST00000431889 PRR5-ARHGAP8B1AHC4 643 aa15.21■□□□□ 0.03
SMARCE1-205ENST00000431889 PAPSS2O95340 614 aaPredicted RBP15.21■□□□□ 0.03
SMARCE1-205ENST00000431889 WARSP23381 471 aaKnown RBP15.21■□□□□ 0.03
SMARCE1-205ENST00000431889 ANXA13P27216 316 aa15.21■□□□□ 0.03
SMARCE1-205ENST00000431889 ME1P48163 572 aa15.21■□□□□ 0.03
SMARCE1-205ENST00000431889 ARHGAP8P85298 464 aa15.21■□□□□ 0.03
SMARCE1-205ENST00000431889 MESP2Q0VG99 397 aa15.21■□□□□ 0.03
SMARCE1-205ENST00000431889 USP4Q13107 963 aa15.21■□□□□ 0.03
SMARCE1-205ENST00000431889 PDGFRLQ15198 375 aa15.21■□□□□ 0.03
SMARCE1-205ENST00000431889 C2orf27AQ580R0 203 aa15.21■□□□□ 0.03
SMARCE1-205ENST00000431889 TCEAL6Q6IPX3 200 aa15.21■□□□□ 0.03
SMARCE1-205ENST00000431889 LIMS2Q7Z4I7 341 aa15.21■□□□□ 0.03
SMARCE1-205ENST00000431889 TCEAL3Q969E4 200 aa15.21■□□□□ 0.03
SMARCE1-205ENST00000431889 CGRRF1Q99675 332 aa15.21■□□□□ 0.03
SMARCE1-205ENST00000431889 C7orf25Q9BPX7 421 aa15.21■□□□□ 0.03
SMARCE1-205ENST00000431889 SMYD3Q9H7B4 428 aa15.21■□□□□ 0.03
SMARCE1-205ENST00000431889 PCDHA7Q9UN72 937 aa15.21■□□□□ 0.03
SMARCE1-205ENST00000431889 LEFTY2O00292 366 aa15.2■□□□□ 0.02
SMARCE1-205ENST00000431889 EIF3DO15371 548 aaKnown RBP eCLIP15.2■□□□□ 0.02
SMARCE1-205ENST00000431889 PHACTR2O75167 634 aa15.2■□□□□ 0.02
SMARCE1-205ENST00000431889 TNNC1P63316 161 aa15.2■□□□□ 0.02
SMARCE1-205ENST00000431889 AMPD3Q01432 767 aa15.2■□□□□ 0.02
SMARCE1-205ENST00000431889 ZNF268Q14587 947 aaPredicted RBP15.2■□□□□ 0.02
SMARCE1-205ENST00000431889 PSMD6Q15008 389 aa15.2■□□□□ 0.02
SMARCE1-205ENST00000431889 DENND5BQ6ZUT9 1274 aa15.2■□□□□ 0.02
SMARCE1-205ENST00000431889 UNC13DQ70J99 1090 aa15.2■□□□□ 0.02
SMARCE1-205ENST00000431889 FILIP1Q7Z7B0 1213 aa15.2■□□□□ 0.02
SMARCE1-205ENST00000431889 SYNPOQ8N3V7 929 aa15.2■□□□□ 0.02
SMARCE1-205ENST00000431889 CCDC33Q8N5R6 958 aa15.2■□□□□ 0.02
SMARCE1-205ENST00000431889 FSIP1Q8NA03 581 aa15.2■□□□□ 0.02
SMARCE1-205ENST00000431889 XXYLT1Q8NBI6 393 aa15.2■□□□□ 0.02
SMARCE1-205ENST00000431889 MYCBPAPQ8TBZ2 947 aa15.2■□□□□ 0.02
SMARCE1-205ENST00000431889 GAB3Q8WWW8 586 aa15.2■□□□□ 0.02
SMARCE1-205ENST00000431889 CD101Q93033 1021 aa15.2■□□□□ 0.02
SMARCE1-205ENST00000431889 ERLEC1Q96DZ1 483 aa15.2■□□□□ 0.02
SMARCE1-205ENST00000431889 FUBP3Q96I24 572 aaKnown RBP eCLIP15.2■□□□□ 0.026e-7■□□□□ 8.2
SMARCE1-205ENST00000431889 B3GNT5Q9BYG0 378 aa15.2■□□□□ 0.02
SMARCE1-205ENST00000431889 TPSD1Q9BZJ3 242 aa15.2■□□□□ 0.02
SMARCE1-205ENST00000431889 SERTAD1Q9UHV2 236 aa15.2■□□□□ 0.02
SMARCE1-205ENST00000431889 SPAG17Q6Q759 2223 aa15.2■□□□□ 0.02
SMARCE1-205ENST00000431889 A8MXQ7 604 aa15.19■□□□□ 0.02
SMARCE1-205ENST00000431889 YEATS4O95619 227 aa15.19■□□□□ 0.02
SMARCE1-205ENST00000431889 PTPN1P18031 435 aaKnown RBP15.19■□□□□ 0.02
SMARCE1-205ENST00000431889 MAGEA11P43364 429 aa15.19■□□□□ 0.02
SMARCE1-205ENST00000431889 SLC6A11P48066 632 aa15.19■□□□□ 0.02
SMARCE1-205ENST00000431889 DNM1Q05193 864 aaKnown RBP15.19■□□□□ 0.02
SMARCE1-205ENST00000431889 TAF10Q12962 218 aa15.19■□□□□ 0.02
SMARCE1-205ENST00000431889 TRPC3Q13507 836 aa15.19■□□□□ 0.02
SMARCE1-205ENST00000431889 SURF1Q15526 300 aa15.19■□□□□ 0.02
SMARCE1-205ENST00000431889 CSRP2Q16527 193 aa15.19■□□□□ 0.02
SMARCE1-205ENST00000431889 AASDHQ4L235 1098 aaPredicted RBP15.19■□□□□ 0.02
SMARCE1-205ENST00000431889 PPM1JQ5JR12 505 aa15.19■□□□□ 0.02
SMARCE1-205ENST00000431889 DPH6Q7L8W6 267 aa15.19■□□□□ 0.02
SMARCE1-205ENST00000431889 ATP2A3Q93084 1043 aa15.19■□□□□ 0.02
SMARCE1-205ENST00000431889 KCNK16Q96T55 309 aa15.19■□□□□ 0.02
SMARCE1-205ENST00000431889 RTKNQ9BST9 563 aa15.19■□□□□ 0.02
SMARCE1-205ENST00000431889 LRRC27Q9C0I9 530 aa15.19■□□□□ 0.02
SMARCE1-205ENST00000431889 TRPM5Q9NZQ8 1165 aa15.19■□□□□ 0.02
SMARCE1-205ENST00000431889 CPQQ9Y646 472 aa15.19■□□□□ 0.02
SMARCE1-205ENST00000431889 MORC2Q9Y6X9 1032 aaPredicted RBP15.19■□□□□ 0.02
SMARCE1-205ENST00000431889 MYH10P35580 1976 aa15.19■□□□□ 0.02
SMARCE1-205ENST00000431889 ZNF840PA6NDX5 716 aa15.19■□□□□ 0.02
SMARCE1-205ENST00000431889 KIAA0391O15091 583 aaKnown RBP15.19■□□□□ 0.02
SMARCE1-205ENST00000431889 EXOC3O60645 756 aa15.19■□□□□ 0.02
SMARCE1-205ENST00000431889 F13A1P00488 732 aa15.19■□□□□ 0.02
SMARCE1-205ENST00000431889 HSP90AA1P07900 732 aaKnown RBP15.19■□□□□ 0.02
SMARCE1-205ENST00000431889 ZSCAN22P10073 491 aaPredicted RBP15.19■□□□□ 0.02
SMARCE1-205ENST00000431889 DRD1P21728 446 aa15.19■□□□□ 0.02
SMARCE1-205ENST00000431889 CNR2P34972 360 aa15.19■□□□□ 0.02
SMARCE1-205ENST00000431889 DLG4P78352 724 aa15.19■□□□□ 0.02
SMARCE1-205ENST00000431889 BIRC3Q13489 604 aa15.19■□□□□ 0.02
SMARCE1-205ENST00000431889 DMC1Q14565 340 aa15.19■□□□□ 0.02
SMARCE1-205ENST00000431889 TDRD10Q5VZ19 366 aaKnown RBP15.19■□□□□ 0.02
SMARCE1-205ENST00000431889 SCAMP5Q8TAC9 235 aa15.19■□□□□ 0.02
SMARCE1-205ENST00000431889 SPATA17Q96L03 361 aa15.19■□□□□ 0.02
SMARCE1-205ENST00000431889 SDCBP2Q9H190 292 aa15.19■□□□□ 0.02
SMARCE1-205ENST00000431889 CUEDC2Q9H467 287 aa15.19■□□□□ 0.02
SMARCE1-205ENST00000431889 CHORDC1Q9UHD1 332 aaPredicted RBP15.19■□□□□ 0.02
SMARCE1-205ENST00000431889 ZMYM5Q9UJ78 669 aa15.19■□□□□ 0.02
SMARCE1-205ENST00000431889 ATG13O75143 517 aa15.18■□□□□ 0.02
SMARCE1-205ENST00000431889 OPRD1P41143 372 aa15.18■□□□□ 0.02
SMARCE1-205ENST00000431889 DGKEP52429 567 aa15.18■□□□□ 0.02
SMARCE1-205ENST00000431889 EHHADHQ08426 723 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms