RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 ARHGAP17Q68EM7 881 aa17.52■□□□□ 0.4
USHBP1-203ENST00000431146 OLFML1Q6UWY5 402 aa17.52■□□□□ 0.4
USHBP1-203ENST00000431146 LIMS2Q7Z4I7 341 aa17.52■□□□□ 0.4
USHBP1-203ENST00000431146 REM2Q8IYK8 340 aaPredicted RBP17.52■□□□□ 0.4
USHBP1-203ENST00000431146 HACE1Q8IYU2 909 aa17.52■□□□□ 0.4
USHBP1-203ENST00000431146 IQCKQ8N0W5 287 aa17.52■□□□□ 0.4
USHBP1-203ENST00000431146 CRYBG2Q8N1P7 616 aa17.52■□□□□ 0.4
USHBP1-203ENST00000431146 RUFY1Q96T51 708 aa17.52■□□□□ 0.4
USHBP1-203ENST00000431146 ADAM2Q99965 735 aa17.52■□□□□ 0.4
USHBP1-203ENST00000431146 SLC4A5Q9BY07 1137 aa17.52■□□□□ 0.4
USHBP1-203ENST00000431146 hCG_1818297A0A087WSY0 165 aa17.51■□□□□ 0.39
USHBP1-203ENST00000431146 C3orf70A6NLC5 250 aaPredicted RBP17.51■□□□□ 0.39
USHBP1-203ENST00000431146 C2CD4BA6NLJ0 364 aa17.51■□□□□ 0.39
USHBP1-203ENST00000431146 CLDN5O00501 218 aa17.51■□□□□ 0.39
USHBP1-203ENST00000431146 GPD1P21695 349 aa17.51■□□□□ 0.39
USHBP1-203ENST00000431146 CETN2P41208 172 aa17.51■□□□□ 0.39
USHBP1-203ENST00000431146 CDKN2BP42772 138 aa17.51■□□□□ 0.39
USHBP1-203ENST00000431146 VPS41P49754 854 aa17.51■□□□□ 0.39
USHBP1-203ENST00000431146 APLP1P51693 650 aa17.51■□□□□ 0.39
USHBP1-203ENST00000431146 ATP11AP98196 1134 aa17.51■□□□□ 0.39
USHBP1-203ENST00000431146 ALS2CLQ60I27 953 aa17.51■□□□□ 0.39
USHBP1-203ENST00000431146 TMC3Q7Z5M5 1100 aa17.51■□□□□ 0.39
USHBP1-203ENST00000431146 B3GALNT2Q8NCR0 500 aa17.51■□□□□ 0.39
USHBP1-203ENST00000431146 UBLCP1Q8WVY7 318 aaPredicted RBP17.51■□□□□ 0.39
USHBP1-203ENST00000431146 HSPH1Q92598 858 aa17.51■□□□□ 0.39
USHBP1-203ENST00000431146 RUNDC3BQ96NL0 473 aa17.51■□□□□ 0.39
USHBP1-203ENST00000431146 DDX56Q9NY93 547 aaKnown RBP17.51■□□□□ 0.39
USHBP1-203ENST00000431146 PLAAQ9Y263 795 aa17.51■□□□□ 0.39
USHBP1-203ENST00000431146 TDRD15B5MCY1 1934 aaKnown RBP17.51■□□□□ 0.39
USHBP1-203ENST00000431146 RNF8O76064 485 aa17.51■□□□□ 0.39
USHBP1-203ENST00000431146 LCP1P13796 627 aa17.51■□□□□ 0.39
USHBP1-203ENST00000431146 ZNF143P52747 638 aaPredicted RBP17.51■□□□□ 0.39
USHBP1-203ENST00000431146 DYNLT1P63172 113 aa17.51■□□□□ 0.39
USHBP1-203ENST00000431146 BST2Q10589 180 aaKnown RBP17.51■□□□□ 0.39
USHBP1-203ENST00000431146 TERF2Q15554 542 aa17.51■□□□□ 0.39
USHBP1-203ENST00000431146 HADHQ16836 314 aaKnown RBP17.51■□□□□ 0.39
USHBP1-203ENST00000431146 PAN2Q504Q3 1202 aaKnown RBP17.51■□□□□ 0.39
USHBP1-203ENST00000431146 TFDP3Q5H9I0 405 aa17.51■□□□□ 0.39
USHBP1-203ENST00000431146 TMEM110Q86TL2 294 aa17.51■□□□□ 0.39
USHBP1-203ENST00000431146 TOP6BLQ8N6T0 577 aa17.51■□□□□ 0.39
USHBP1-203ENST00000431146 ANKRD52Q8NB46 1076 aa17.51■□□□□ 0.39
USHBP1-203ENST00000431146 OR2W6PQ8NHA6 318 aa17.51■□□□□ 0.39
USHBP1-203ENST00000431146 SENP8Q96LD8 212 aa17.51■□□□□ 0.39
USHBP1-203ENST00000431146 GLT1D1Q96MS3 346 aa17.51■□□□□ 0.39
USHBP1-203ENST00000431146 PEBP4Q96S96 227 aa17.51■□□□□ 0.39
USHBP1-203ENST00000431146 CFHR5Q9BXR6 569 aa17.51■□□□□ 0.39
USHBP1-203ENST00000431146 SLC38A7Q9NVC3 462 aa17.51■□□□□ 0.39
USHBP1-203ENST00000431146 ASIC3Q9UHC3 531 aa17.51■□□□□ 0.39
USHBP1-203ENST00000431146 USP18Q9UMW8 372 aa17.51■□□□□ 0.39
USHBP1-203ENST00000431146 INPP5FQ9Y2H2 1132 aa17.51■□□□□ 0.39
USHBP1-203ENST00000431146 ATP8A1Q9Y2Q0 1164 aa17.51■□□□□ 0.39
USHBP1-203ENST00000431146 WARSP23381 471 aaKnown RBP17.5■□□□□ 0.39
USHBP1-203ENST00000431146 DRG2P55039 364 aaKnown RBP17.5■□□□□ 0.39
USHBP1-203ENST00000431146 GABPB1Q06547 395 aaPredicted RBP17.5■□□□□ 0.39
USHBP1-203ENST00000431146 CCNG2Q16589 344 aa17.5■□□□□ 0.39
USHBP1-203ENST00000431146 KIAA0319Q5VV43 1072 aa17.5■□□□□ 0.39
USHBP1-203ENST00000431146 POLNQ7Z5Q5 900 aa17.5■□□□□ 0.39
USHBP1-203ENST00000431146 KHSRPQ92945 711 aaKnown RBP eCLIP17.5■□□□□ 0.39
USHBP1-203ENST00000431146 ASNSD1Q9NWL6 643 aa17.5■□□□□ 0.39
USHBP1-203ENST00000431146 SAE1Q9UBE0 346 aaPredicted RBP17.5■□□□□ 0.39
USHBP1-203ENST00000431146 DNPEPQ9ULA0 475 aa17.5■□□□□ 0.39
USHBP1-203ENST00000431146 GIT1Q9Y2X7 761 aa17.5■□□□□ 0.39
USHBP1-203ENST00000431146 I3L4J1 428 aa17.5■□□□□ 0.39
USHBP1-203ENST00000431146 TJP3O95049 919 aa17.5■□□□□ 0.39
USHBP1-203ENST00000431146 TRUB2O95900 331 aaKnown RBP17.5■□□□□ 0.39
USHBP1-203ENST00000431146 KRT7P08729 469 aa17.5■□□□□ 0.39
USHBP1-203ENST00000431146 BCAT1P54687 386 aa17.5■□□□□ 0.39
USHBP1-203ENST00000431146 SLC6A3Q01959 620 aa17.5■□□□□ 0.39
USHBP1-203ENST00000431146 DSC3Q14574 896 aa17.5■□□□□ 0.39
USHBP1-203ENST00000431146 CCDC14Q49A88 953 aa17.5■□□□□ 0.39
USHBP1-203ENST00000431146 LHX8Q68G74 356 aa17.5■□□□□ 0.39
USHBP1-203ENST00000431146 MRPL10Q7Z7H8 261 aaKnown RBP17.5■□□□□ 0.39
USHBP1-203ENST00000431146 ATL2Q8NHH9 583 aa17.5■□□□□ 0.39
USHBP1-203ENST00000431146 SLCO2A1Q92959 643 aa17.5■□□□□ 0.39
USHBP1-203ENST00000431146 ARL8AQ96BM9 186 aa17.5■□□□□ 0.39
USHBP1-203ENST00000431146 LRRC45Q96CN5 670 aa17.5■□□□□ 0.39
USHBP1-203ENST00000431146 TNIP3Q96KP6 325 aa17.5■□□□□ 0.39
USHBP1-203ENST00000431146 CNPY3Q9BT09 278 aa17.5■□□□□ 0.39
USHBP1-203ENST00000431146 RSAD1Q9HA92 442 aa17.5■□□□□ 0.39
USHBP1-203ENST00000431146 MYCP01106 439 aaPredicted RBP17.49■□□□□ 0.39
USHBP1-203ENST00000431146 RPLP2P05387 115 aaKnown RBP17.49■□□□□ 0.39
USHBP1-203ENST00000431146 SETSIPP0DME0 302 aa17.49■□□□□ 0.39
USHBP1-203ENST00000431146 CKBP12277 381 aa17.49■□□□□ 0.39
USHBP1-203ENST00000431146 TFE3P19532 575 aaPredicted RBP17.49■□□□□ 0.39
USHBP1-203ENST00000431146 KDELR1P24390 212 aa17.49■□□□□ 0.39
USHBP1-203ENST00000431146 RABGGTBP53611 331 aa17.49■□□□□ 0.39
USHBP1-203ENST00000431146 PXYLP1Q8TE99 480 aa17.49■□□□□ 0.39
USHBP1-203ENST00000431146 HASPINQ8TF76 798 aa17.49■□□□□ 0.39
USHBP1-203ENST00000431146 SH3GL2Q99962 352 aa17.49■□□□□ 0.39
USHBP1-203ENST00000431146 FAM204AQ9H8W3 233 aa17.49■□□□□ 0.39
USHBP1-203ENST00000431146 DDX43Q9NXZ2 648 aaKnown RBP17.49■□□□□ 0.39
USHBP1-203ENST00000431146 ADAM21Q9UKJ8 722 aa17.49■□□□□ 0.39
USHBP1-203ENST00000431146 A0A0U1RQF3 1178 aa17.48■□□□□ 0.39
USHBP1-203ENST00000431146 A0A1W2PQ45 241 aaPredicted RBP17.48■□□□□ 0.39
USHBP1-203ENST00000431146 A0A1W2PQY0 241 aa17.48■□□□□ 0.39
USHBP1-203ENST00000431146 CABYRO75952 493 aa17.48■□□□□ 0.39
USHBP1-203ENST00000431146 BEST1O76090 585 aa17.48■□□□□ 0.39
USHBP1-203ENST00000431146 COPS2P61201 443 aa17.48■□□□□ 0.39
USHBP1-203ENST00000431146 TTMPQ5BVD1 217 aa17.48■□□□□ 0.39
USHBP1-203ENST00000431146 MDH1BQ5I0G3 518 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms