RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 C4BPAP04003 597 aaKnown RBP12.57□□□□□ -0.4
HDAC4-202ENST00000430200 NR3C1P04150 777 aa12.57□□□□□ -0.4
HDAC4-202ENST00000430200 CHRM1P11229 460 aaPredicted RBP12.57□□□□□ -0.4
HDAC4-202ENST00000430200 CMA1P23946 247 aa12.57□□□□□ -0.4
HDAC4-202ENST00000430200 DDX6P26196 483 aaKnown RBP eCLIP12.57□□□□□ -0.4
HDAC4-202ENST00000430200 PXNP49023 591 aaPredicted RBP12.57□□□□□ -0.4
HDAC4-202ENST00000430200 CCR3P51677 355 aa12.57□□□□□ -0.4
HDAC4-202ENST00000430200 PLCB2Q00722 1185 aa12.57□□□□□ -0.4
HDAC4-202ENST00000430200 FAM160A1Q05DH4 1040 aa12.57□□□□□ -0.4
HDAC4-202ENST00000430200 EML3Q32P44 896 aa12.57□□□□□ -0.4
HDAC4-202ENST00000430200 HEATR6Q6AI08 1181 aaKnown RBP12.57□□□□□ -0.4
HDAC4-202ENST00000430200 ATL3Q6DD88 541 aa12.57□□□□□ -0.4
HDAC4-202ENST00000430200 CEP57L1Q8IYX8 460 aa12.57□□□□□ -0.4
HDAC4-202ENST00000430200 B3GALNT2Q8NCR0 500 aa12.57□□□□□ -0.4
HDAC4-202ENST00000430200 OR6B3Q8NGW1 331 aa12.57□□□□□ -0.4
HDAC4-202ENST00000430200 SH3RF2Q8TEC5 729 aa12.57□□□□□ -0.4
HDAC4-202ENST00000430200 SPATA17Q96L03 361 aa12.57□□□□□ -0.4
HDAC4-202ENST00000430200 SPATA32Q96LK8 384 aa12.57□□□□□ -0.4
HDAC4-202ENST00000430200 TWNKQ96RR1 684 aa12.57□□□□□ -0.4
HDAC4-202ENST00000430200 FNBP1Q96RU3 617 aa12.57□□□□□ -0.4
HDAC4-202ENST00000430200 HINFPQ9BQA5 517 aa12.57□□□□□ -0.4
HDAC4-202ENST00000430200 RNF38Q9H0F5 515 aa12.57□□□□□ -0.4
HDAC4-202ENST00000430200 KIF9Q9HAQ2 790 aa12.57□□□□□ -0.4
HDAC4-202ENST00000430200 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.57□□□□□ -0.4
HDAC4-202ENST00000430200 EXOC1Q9NV70 894 aa12.57□□□□□ -0.4
HDAC4-202ENST00000430200 MAGEC2Q9UBF1 373 aaPredicted RBP12.57□□□□□ -0.4
HDAC4-202ENST00000430200 THADAQ6YHU6 1953 aa12.57□□□□□ -0.4
HDAC4-202ENST00000430200 FRYQ5TBA9 3013 aa12.56□□□□□ -0.4
HDAC4-202ENST00000430200 RNF40O75150 1001 aa12.56□□□□□ -0.4
HDAC4-202ENST00000430200 RPN1P04843 607 aaKnown RBP12.56□□□□□ -0.4
HDAC4-202ENST00000430200 TRIM49P0CI25 452 aa12.56□□□□□ -0.4
HDAC4-202ENST00000430200 TRIM49CP0CI26 452 aa12.56□□□□□ -0.4
HDAC4-202ENST00000430200 PTPN1P18031 435 aaKnown RBP12.56□□□□□ -0.4
HDAC4-202ENST00000430200 GJA4P35212 333 aa12.56□□□□□ -0.4
HDAC4-202ENST00000430200 ASPAP45381 313 aa12.56□□□□□ -0.4
HDAC4-202ENST00000430200 ID4P47928 161 aa12.56□□□□□ -0.4
HDAC4-202ENST00000430200 CXCL12P48061 93 aa12.56□□□□□ -0.4
HDAC4-202ENST00000430200 SNRPFP62306 86 aaKnown RBP12.56□□□□□ -0.4
HDAC4-202ENST00000430200 TNNC1P63316 161 aa12.56□□□□□ -0.4
HDAC4-202ENST00000430200 DPYDQ12882 1025 aa12.56□□□□□ -0.4
HDAC4-202ENST00000430200 LRRC32Q14392 662 aa12.56□□□□□ -0.4
HDAC4-202ENST00000430200 ZNF699Q32M78 642 aa12.56□□□□□ -0.4
HDAC4-202ENST00000430200 ZCWPW2Q504Y3 356 aa12.56□□□□□ -0.4
HDAC4-202ENST00000430200 VSTM1Q6UX27 236 aa12.56□□□□□ -0.4
HDAC4-202ENST00000430200 C4orf50Q6ZRC1 276 aa12.56□□□□□ -0.4
HDAC4-202ENST00000430200 DENND5BQ6ZUT9 1274 aa12.56□□□□□ -0.4
HDAC4-202ENST00000430200 FAM35AQ86V20 835 aa12.56□□□□□ -0.4
HDAC4-202ENST00000430200 SLC9A9Q8IVB4 645 aa12.56□□□□□ -0.4
HDAC4-202ENST00000430200 SMYD4Q8IYR2 804 aaPredicted RBP12.56□□□□□ -0.4
HDAC4-202ENST00000430200 ZMIZ2Q8NF64 920 aa12.56□□□□□ -0.4
HDAC4-202ENST00000430200 ATRIPQ8WXE1 791 aa12.56□□□□□ -0.4
HDAC4-202ENST00000430200 WBP2Q969T9 261 aa12.56□□□□□ -0.4
HDAC4-202ENST00000430200 ZFRQ96KR1 1074 aaKnown RBP12.56□□□□□ -0.4
HDAC4-202ENST00000430200 KCNK16Q96T55 309 aa12.56□□□□□ -0.4
HDAC4-202ENST00000430200 IER2Q9BTL4 223 aa12.56□□□□□ -0.4
HDAC4-202ENST00000430200 LINC00597Q9H2U6 94 aa12.56□□□□□ -0.4
HDAC4-202ENST00000430200 VRTNQ9H8Y1 702 aa12.56□□□□□ -0.4
HDAC4-202ENST00000430200 APOBEC3GQ9HC16 384 aaKnown RBP12.56□□□□□ -0.4
HDAC4-202ENST00000430200 UXTQ9UBK9 157 aaPredicted RBP12.56□□□□□ -0.4
HDAC4-202ENST00000430200 CFAP45Q9UL16 551 aa12.56□□□□□ -0.4
HDAC4-202ENST00000430200 MAPK8IP1Q9UQF2 711 aa12.56□□□□□ -0.4
HDAC4-202ENST00000430200 WDFY3Q8IZQ1 3526 aa12.55□□□□□ -0.4
HDAC4-202ENST00000430200 ABCA7Q8IZY2 2146 aa12.55□□□□□ -0.4
HDAC4-202ENST00000430200 TRAV19A0A0A6YYK7 116 aa12.55□□□□□ -0.4
HDAC4-202ENST00000430200 MED19A0JLT2 244 aaPredicted RBP12.55□□□□□ -0.4
HDAC4-202ENST00000430200 ZNF840PA6NDX5 716 aa12.55□□□□□ -0.4
HDAC4-202ENST00000430200 A8MXQ7 604 aa12.55□□□□□ -0.4
HDAC4-202ENST00000430200 TRDMT1O14717 391 aaKnown RBP12.55□□□□□ -0.4
HDAC4-202ENST00000430200 BEST1O76090 585 aa12.55□□□□□ -0.4
HDAC4-202ENST00000430200 OAS1P00973 400 aaKnown RBP12.55□□□□□ -0.4
HDAC4-202ENST00000430200 USP17L7P0C7H9 530 aa12.55□□□□□ -0.4
HDAC4-202ENST00000430200 CCDC130P13994 396 aa12.55□□□□□ -0.4
HDAC4-202ENST00000430200 GNL1P36915 607 aaPredicted RBP12.55□□□□□ -0.4
HDAC4-202ENST00000430200 GRIK1P39086 918 aa12.55□□□□□ -0.4
HDAC4-202ENST00000430200 NOP14P78316 857 aaKnown RBP12.55□□□□□ -0.4
HDAC4-202ENST00000430200 IFRD2Q12894 506 aaPredicted RBP12.55□□□□□ -0.4
HDAC4-202ENST00000430200 BIRC3Q13489 604 aa12.55□□□□□ -0.4
HDAC4-202ENST00000430200 NCOA4Q13772 614 aa12.55□□□□□ -0.4
HDAC4-202ENST00000430200 ZACNQ401N2 412 aa12.55□□□□□ -0.4
HDAC4-202ENST00000430200 GPRIN1Q7Z2K8 1008 aa12.55□□□□□ -0.4
HDAC4-202ENST00000430200 FUKQ8N0W3 1084 aa12.55□□□□□ -0.4
HDAC4-202ENST00000430200 FSIP1Q8NA03 581 aa12.55□□□□□ -0.4
HDAC4-202ENST00000430200 SCAMP5Q8TAC9 235 aa12.55□□□□□ -0.4
HDAC4-202ENST00000430200 TMEM174Q8WUU8 243 aa12.55□□□□□ -0.4
HDAC4-202ENST00000430200 OSCP1Q8WVF1 389 aa12.55□□□□□ -0.4
HDAC4-202ENST00000430200 C8orf48Q96LL4 319 aa12.55□□□□□ -0.4
HDAC4-202ENST00000430200 SNX25Q9H3E2 840 aa12.55□□□□□ -0.4
HDAC4-202ENST00000430200 ECT2Q9H8V3 914 aa12.55□□□□□ -0.4
HDAC4-202ENST00000430200 SMPD4Q9NXE4 827 aa12.55□□□□□ -0.4
HDAC4-202ENST00000430200 NCDNQ9UBB6 729 aa12.55□□□□□ -0.4
HDAC4-202ENST00000430200 ARHGAP26Q9UNA1 814 aa12.55□□□□□ -0.4
HDAC4-202ENST00000430200 MUC22E2RYF6 1773 aaPredicted RBP12.55□□□□□ -0.4
HDAC4-202ENST00000430200 NYNRINQ9P2P1 1898 aaKnown RBP12.55□□□□□ -0.4
HDAC4-202ENST00000430200 SOBPA7XYQ1 873 aa12.54□□□□□ -0.4
HDAC4-202ENST00000430200 LEFTY2O00292 366 aa12.54□□□□□ -0.4
HDAC4-202ENST00000430200 TNFRSF10BO14763 440 aa12.54□□□□□ -0.4
HDAC4-202ENST00000430200 AKAP3O75969 853 aa12.54□□□□□ -0.4
HDAC4-202ENST00000430200 RHOBTB3O94955 611 aa12.54□□□□□ -0.4
HDAC4-202ENST00000430200 CYP17A1P05093 508 aa12.54□□□□□ -0.4
HDAC4-202ENST00000430200 TCF3P15923 654 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms