RNA–Protein interactions for RNA: ENST00000428153.6

DDR1-235, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,257 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-235ENST00000428153 PCED1BQ96HM7 432 aa18.59■□□□□ 0.57
DDR1-235ENST00000428153 FAM84AQ96KN4 292 aa18.59■□□□□ 0.57
DDR1-235ENST00000428153 C8orf48Q96LL4 319 aa18.59■□□□□ 0.57
DDR1-235ENST00000428153 SLC22A12Q96S37 553 aa18.59■□□□□ 0.57
DDR1-235ENST00000428153 CYP2S1Q96SQ9 504 aa18.59■□□□□ 0.57
DDR1-235ENST00000428153 MMS19Q96T76 1030 aa18.59■□□□□ 0.57
DDR1-235ENST00000428153 CGRRF1Q99675 332 aa18.59■□□□□ 0.57
DDR1-235ENST00000428153 FBRSL1Q9HCM7 1045 aaKnown RBP18.59■□□□□ 0.57
DDR1-235ENST00000428153 TRPM5Q9NZQ8 1165 aa18.59■□□□□ 0.57
DDR1-235ENST00000428153 EBF1Q9UH73 591 aa18.59■□□□□ 0.57
DDR1-235ENST00000428153 CHD8Q9HCK8 2581 aa18.59■□□□□ 0.57
DDR1-235ENST00000428153 C2orf78A6NCI8 922 aa18.58■□□□□ 0.56
DDR1-235ENST00000428153 HCRTO43612 131 aa18.58■□□□□ 0.56
DDR1-235ENST00000428153 CCDC192P0DO97 292 aa18.58■□□□□ 0.56
DDR1-235ENST00000428153 TNNI1P19237 187 aa18.58■□□□□ 0.56
DDR1-235ENST00000428153 BDNFP23560 247 aa18.58■□□□□ 0.56
DDR1-235ENST00000428153 ATICP31939 592 aa18.58■□□□□ 0.56
DDR1-235ENST00000428153 PSMC1P62191 440 aaKnown RBP18.58■□□□□ 0.56
DDR1-235ENST00000428153 SLC7A9P82251 487 aa18.58■□□□□ 0.56
DDR1-235ENST00000428153 BMT2Q1RMZ1 405 aa18.58■□□□□ 0.56
DDR1-235ENST00000428153 HPS3Q969F9 1004 aa18.58■□□□□ 0.56
DDR1-235ENST00000428153 DHX58Q96C10 678 aa18.58■□□□□ 0.56
DDR1-235ENST00000428153 ELOVL4Q9GZR5 314 aa18.58■□□□□ 0.56
DDR1-235ENST00000428153 WNT6Q9Y6F9 365 aa18.58■□□□□ 0.56
DDR1-235ENST00000428153 HELZP42694 1942 aaKnown RBP18.58■□□□□ 0.56
DDR1-235ENST00000428153 PVALEFA0A1B0GWK0 134 aa18.57■□□□□ 0.56
DDR1-235ENST00000428153 ZNF840PA6NDX5 716 aa18.57■□□□□ 0.56
DDR1-235ENST00000428153 AXIN1O15169 862 aa18.57■□□□□ 0.56
DDR1-235ENST00000428153 OLFM2O95897 454 aa18.57■□□□□ 0.56
DDR1-235ENST00000428153 CST3P01034 146 aaPredicted RBP18.57■□□□□ 0.56
DDR1-235ENST00000428153 DLATP10515 647 aaKnown RBP18.57■□□□□ 0.56
DDR1-235ENST00000428153 GNL1P36915 607 aaPredicted RBP18.57■□□□□ 0.56
DDR1-235ENST00000428153 CYP27A1Q02318 531 aa18.57■□□□□ 0.56
DDR1-235ENST00000428153 CYP24A1Q07973 514 aa18.57■□□□□ 0.56
DDR1-235ENST00000428153 PLA2G2CQ5R387 149 aa18.57■□□□□ 0.56
DDR1-235ENST00000428153 SHC4Q6S5L8 630 aa18.57■□□□□ 0.56
DDR1-235ENST00000428153 RPLP0P6Q8NHW5 317 aa18.57■□□□□ 0.56
DDR1-235ENST00000428153 SCFD1Q8WVM8 642 aa18.57■□□□□ 0.56
DDR1-235ENST00000428153 BACH2Q9BYV9 841 aa18.57■□□□□ 0.56
DDR1-235ENST00000428153 SNX25Q9H3E2 840 aa18.57■□□□□ 0.56
DDR1-235ENST00000428153 VRTNQ9H8Y1 702 aa18.57■□□□□ 0.56
DDR1-235ENST00000428153 ATG2BQ96BY7 2078 aa18.57■□□□□ 0.56
DDR1-235ENST00000428153 KMT2BQ9UMN6 2715 aaPredicted RBP18.56■□□□□ 0.56
DDR1-235ENST00000428153 SLC9A3R1O14745 358 aaPredicted RBP18.56■□□□□ 0.56
DDR1-235ENST00000428153 APBB3O95704 486 aa18.56■□□□□ 0.56
DDR1-235ENST00000428153 PDGFRBP09619 1106 aa18.56■□□□□ 0.56
DDR1-235ENST00000428153 AP3M2P53677 418 aa18.56■□□□□ 0.56
DDR1-235ENST00000428153 TNNC1P63316 161 aa18.56■□□□□ 0.56
DDR1-235ENST00000428153 WDR72Q3MJ13 1102 aa18.56■□□□□ 0.56
DDR1-235ENST00000428153 ATL3Q6DD88 541 aa18.56■□□□□ 0.56
DDR1-235ENST00000428153 C11orf74Q86VG3 221 aa18.56■□□□□ 0.56
DDR1-235ENST00000428153 C12orf50Q8NA57 414 aaPredicted RBP18.56■□□□□ 0.56
DDR1-235ENST00000428153 GOLGA5Q8TBA6 731 aa18.56■□□□□ 0.56
DDR1-235ENST00000428153 TMEM174Q8WUU8 243 aa18.56■□□□□ 0.56
DDR1-235ENST00000428153 SYAP1Q96A49 352 aaPredicted RBP18.56■□□□□ 0.56
DDR1-235ENST00000428153 EML5Q05BV3 1969 aa18.55■□□□□ 0.56
DDR1-235ENST00000428153 F8VP50 259 aa18.55■□□□□ 0.56
DDR1-235ENST00000428153 HOXC13P31276 330 aa18.55■□□□□ 0.56
DDR1-235ENST00000428153 EIF2DP41214 584 aaKnown RBP18.55■□□□□ 0.56
DDR1-235ENST00000428153 PXNP49023 591 aaPredicted RBP18.55■□□□□ 0.56
DDR1-235ENST00000428153 PSMD2Q13200 908 aa18.55■□□□□ 0.56
DDR1-235ENST00000428153 DMC1Q14565 340 aa18.55■□□□□ 0.56
DDR1-235ENST00000428153 PLK5Q496M5 336 aa18.55■□□□□ 0.56
DDR1-235ENST00000428153 AASDHQ4L235 1098 aaPredicted RBP18.55■□□□□ 0.56
DDR1-235ENST00000428153 MDH1BQ5I0G3 518 aa18.55■□□□□ 0.56
DDR1-235ENST00000428153 PPM1JQ5JR12 505 aa18.55■□□□□ 0.56
DDR1-235ENST00000428153 KBTBD6Q86V97 674 aa18.55■□□□□ 0.56
DDR1-235ENST00000428153 DDX42Q86XP3 938 aaKnown RBP eCLIP18.55■□□□□ 0.56
DDR1-235ENST00000428153 RDH13Q8NBN7 331 aa18.55■□□□□ 0.56
DDR1-235ENST00000428153 PDZD8Q8NEN9 1154 aa18.55■□□□□ 0.56
DDR1-235ENST00000428153 OR6B3Q8NGW1 331 aa18.55■□□□□ 0.56
DDR1-235ENST00000428153 OVCA2Q8WZ82 227 aa18.55■□□□□ 0.56
DDR1-235ENST00000428153 EZH1Q92800 747 aaPredicted RBP18.55■□□□□ 0.56
DDR1-235ENST00000428153 SNX21Q969T3 373 aa18.55■□□□□ 0.56
DDR1-235ENST00000428153 SLITRK1Q96PX8 696 aa18.55■□□□□ 0.56
DDR1-235ENST00000428153 DUSP9Q99956 384 aaKnown RBP18.55■□□□□ 0.56
DDR1-235ENST00000428153 MRPL45Q9BRJ2 306 aaKnown RBP18.55■□□□□ 0.56
DDR1-235ENST00000428153 ARRDC1-AS1Q9H2J1 176 aa18.55■□□□□ 0.56
DDR1-235ENST00000428153 TFIP11Q9UBB9 837 aaKnown RBP18.55■□□□□ 0.56
DDR1-235ENST00000428153 KIAA1549LQ6ZVL6 1849 aa18.54■□□□□ 0.56
DDR1-235ENST00000428153 LEFTY2O00292 366 aa18.54■□□□□ 0.56
DDR1-235ENST00000428153 POLR2DO15514 142 aaKnown RBP18.54■□□□□ 0.56
DDR1-235ENST00000428153 GDF9O60383 454 aa18.54■□□□□ 0.56
DDR1-235ENST00000428153 RHOBTB1O94844 696 aa18.54■□□□□ 0.56
DDR1-235ENST00000428153 OAS1P00973 400 aaKnown RBP18.54■□□□□ 0.56
DDR1-235ENST00000428153 PTPN1P18031 435 aaKnown RBP18.54■□□□□ 0.56
DDR1-235ENST00000428153 USP46P62068 366 aa18.54■□□□□ 0.56
DDR1-235ENST00000428153 ZXDBP98169 803 aa18.54■□□□□ 0.56
DDR1-235ENST00000428153 TRPC3Q13507 836 aa18.54■□□□□ 0.56
DDR1-235ENST00000428153 ELF2Q15723 593 aa18.54■□□□□ 0.56
DDR1-235ENST00000428153 KNOP1Q1ED39 458 aaKnown RBP18.54■□□□□ 0.56
DDR1-235ENST00000428153 TDRD10Q5VZ19 366 aaKnown RBP18.54■□□□□ 0.56
DDR1-235ENST00000428153 IL31Q6EBC2 164 aa18.54■□□□□ 0.56
DDR1-235ENST00000428153 CCDC127Q96BQ5 260 aa18.54■□□□□ 0.56
DDR1-235ENST00000428153 HHIPQ96QV1 700 aa18.54■□□□□ 0.56
DDR1-235ENST00000428153 XYLT2Q9H1B5 865 aa18.54■□□□□ 0.56
DDR1-235ENST00000428153 LINC00597Q9H2U6 94 aa18.54■□□□□ 0.56
DDR1-235ENST00000428153 VPS45Q9NRW7 570 aa18.54■□□□□ 0.56
DDR1-235ENST00000428153 NME7Q9Y5B8 376 aa18.54■□□□□ 0.56
DDR1-235ENST00000428153 MYO16Q9Y6X6 1858 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms