RNA–Protein interactions for RNA: ENST00000427494.6

APOBEC3D-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3D, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-202ENST00000427494 PCK1P35558 622 aa14.69□□□□□ -0.06
APOBEC3D-202ENST00000427494 CDR1P51861 262 aa14.69□□□□□ -0.06
APOBEC3D-202ENST00000427494 CRYBB1P53674 252 aaPredicted RBP14.69□□□□□ -0.06
APOBEC3D-202ENST00000427494 IFI35P80217 286 aaPredicted RBP14.69□□□□□ -0.06
APOBEC3D-202ENST00000427494 PURAQ00577 322 aaKnown RBP14.69□□□□□ -0.06
APOBEC3D-202ENST00000427494 PDE4CQ08493 712 aa14.69□□□□□ -0.06
APOBEC3D-202ENST00000427494 TAZQ16635 292 aa14.69□□□□□ -0.06
APOBEC3D-202ENST00000427494 KYNUQ16719 465 aa14.69□□□□□ -0.06
APOBEC3D-202ENST00000427494 LONRF1Q17RB8 773 aa14.69□□□□□ -0.06
APOBEC3D-202ENST00000427494 C15orf59Q2T9L4 293 aaPredicted RBP14.69□□□□□ -0.06
APOBEC3D-202ENST00000427494 PKDCCQ504Y2 493 aa14.69□□□□□ -0.06
APOBEC3D-202ENST00000427494 FBXO47Q5MNV8 452 aa14.69□□□□□ -0.06
APOBEC3D-202ENST00000427494 UBXN11Q5T124 520 aa14.69□□□□□ -0.06
APOBEC3D-202ENST00000427494 SH3PXD2AQ5TCZ1 1133 aa14.69□□□□□ -0.06
APOBEC3D-202ENST00000427494 RGMBQ6NW40 437 aa14.69□□□□□ -0.06
APOBEC3D-202ENST00000427494 PMF1Q6P1K2 205 aa14.69□□□□□ -0.06
APOBEC3D-202ENST00000427494 BBS12Q6ZW61 710 aa14.69□□□□□ -0.06
APOBEC3D-202ENST00000427494 UNC93AQ86WB7 457 aa14.69□□□□□ -0.06
APOBEC3D-202ENST00000427494 ZCCHC9Q8N567 271 aaKnown RBP14.69□□□□□ -0.06
APOBEC3D-202ENST00000427494 TTC13Q8NBP0 860 aa14.69□□□□□ -0.06
APOBEC3D-202ENST00000427494 SLC35B2Q8TB61 432 aa14.69□□□□□ -0.06
APOBEC3D-202ENST00000427494 ACTL9Q8TC94 416 aa14.69□□□□□ -0.06
APOBEC3D-202ENST00000427494 ZNF560Q96MR9 790 aa14.69□□□□□ -0.06
APOBEC3D-202ENST00000427494 SELENOSQ9BQE4 189 aa14.69□□□□□ -0.06
APOBEC3D-202ENST00000427494 ROPN1BQ9BZX4 212 aaPredicted RBP14.69□□□□□ -0.06
APOBEC3D-202ENST00000427494 STMN4Q9H169 189 aaPredicted RBP14.69□□□□□ -0.06
APOBEC3D-202ENST00000427494 ADAM7Q9H2U9 754 aa14.69□□□□□ -0.06
APOBEC3D-202ENST00000427494 DPEP3Q9H4B8 488 aa14.69□□□□□ -0.06
APOBEC3D-202ENST00000427494 ROPN1Q9HAT0 212 aaPredicted RBP14.69□□□□□ -0.06
APOBEC3D-202ENST00000427494 NINJ2Q9NZG7 142 aa14.69□□□□□ -0.06
APOBEC3D-202ENST00000427494 SAE1Q9UBE0 346 aaPredicted RBP14.69□□□□□ -0.06
APOBEC3D-202ENST00000427494 HESX1Q9UBX0 185 aa14.69□□□□□ -0.06
APOBEC3D-202ENST00000427494 XPOTO43592 962 aaKnown RBP14.68□□□□□ -0.06
APOBEC3D-202ENST00000427494 HCRTO43612 131 aa14.68□□□□□ -0.06
APOBEC3D-202ENST00000427494 IFNB1P01574 187 aa14.68□□□□□ -0.06
APOBEC3D-202ENST00000427494 SETSIPP0DME0 302 aa14.68□□□□□ -0.06
APOBEC3D-202ENST00000427494 GNAT1P11488 350 aa14.68□□□□□ -0.06
APOBEC3D-202ENST00000427494 AUHQ13825 339 aaKnown RBP14.68□□□□□ -0.06
APOBEC3D-202ENST00000427494 CDO1Q16878 200 aa14.68□□□□□ -0.06
APOBEC3D-202ENST00000427494 CEP128Q6ZU80 1094 aa14.68□□□□□ -0.06
APOBEC3D-202ENST00000427494 CMASQ8NFW8 434 aaPredicted RBP14.68□□□□□ -0.06
APOBEC3D-202ENST00000427494 LPIN3Q9BQK8 851 aa14.68□□□□□ -0.06
APOBEC3D-202ENST00000427494 CALN1Q9BXU9 219 aa14.68□□□□□ -0.06
APOBEC3D-202ENST00000427494 FRMD8P1Q9BZ68 369 aaPredicted RBP14.68□□□□□ -0.06
APOBEC3D-202ENST00000427494 PCDH9Q9HC56 1237 aa14.68□□□□□ -0.06
APOBEC3D-202ENST00000427494 ZFYVE28Q9HCC9 887 aa14.68□□□□□ -0.06
APOBEC3D-202ENST00000427494 PPANQ9NQ55 473 aaKnown RBP14.68□□□□□ -0.06
APOBEC3D-202ENST00000427494 SRRM3A6NNA2 597 aaPredicted RBP14.67□□□□□ -0.06
APOBEC3D-202ENST00000427494 E7EVH7 732 aa14.67□□□□□ -0.06
APOBEC3D-202ENST00000427494 PIRO00625 290 aa14.67□□□□□ -0.06
APOBEC3D-202ENST00000427494 AKR1A1P14550 325 aa14.67□□□□□ -0.06
APOBEC3D-202ENST00000427494 SEC24CP53992 1094 aa14.67□□□□□ -0.06
APOBEC3D-202ENST00000427494 RAB6CQ53S08 254 aa14.67□□□□□ -0.06
APOBEC3D-202ENST00000427494 ARHGAP17Q68EM7 881 aa14.67□□□□□ -0.06
APOBEC3D-202ENST00000427494 MFSD5Q6N075 450 aa14.67□□□□□ -0.06
APOBEC3D-202ENST00000427494 CHADLQ6NUI6 762 aa14.67□□□□□ -0.06
APOBEC3D-202ENST00000427494 OLFML1Q6UWY5 402 aa14.67□□□□□ -0.06
APOBEC3D-202ENST00000427494 NME8Q8N427 588 aa14.67□□□□□ -0.06
APOBEC3D-202ENST00000427494 RBM15Q96T37 977 aaKnown RBP eCLIP14.67□□□□□ -0.06
APOBEC3D-202ENST00000427494 SLC4A5Q9BY07 1137 aa14.67□□□□□ -0.06
APOBEC3D-202ENST00000427494 FOXP3Q9BZS1 431 aa14.67□□□□□ -0.06
APOBEC3D-202ENST00000427494 RAB6CQ9H0N0 254 aa14.67□□□□□ -0.06
APOBEC3D-202ENST00000427494 GOLGA2P5Q9HBQ8 144 aa14.67□□□□□ -0.06
APOBEC3D-202ENST00000427494 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.67□□□□□ -0.06
APOBEC3D-202ENST00000427494 TPX2Q9ULW0 747 aaKnown RBP14.67□□□□□ -0.06
APOBEC3D-202ENST00000427494 IPPQ9Y573 584 aa14.67□□□□□ -0.06
APOBEC3D-202ENST00000427494 KPNA7A9QM74 516 aa14.67□□□□□ -0.06
APOBEC3D-202ENST00000427494 PDGFRBP09619 1106 aa14.67□□□□□ -0.06
APOBEC3D-202ENST00000427494 FGFR1P11362 822 aa14.67□□□□□ -0.06
APOBEC3D-202ENST00000427494 CCDC130P13994 396 aa14.67□□□□□ -0.06
APOBEC3D-202ENST00000427494 KCNE1P15382 129 aa14.67□□□□□ -0.06
APOBEC3D-202ENST00000427494 ATP11AP98196 1134 aa14.67□□□□□ -0.06
APOBEC3D-202ENST00000427494 SLC6A3Q01959 620 aa14.67□□□□□ -0.06
APOBEC3D-202ENST00000427494 NLRP14Q86W24 1093 aa14.67□□□□□ -0.06
APOBEC3D-202ENST00000427494 MDM1Q8TC05 714 aa14.67□□□□□ -0.06
APOBEC3D-202ENST00000427494 SLC35F5Q8WV83 523 aa14.67□□□□□ -0.06
APOBEC3D-202ENST00000427494 KBTBD7Q8WVZ9 684 aa14.67□□□□□ -0.06
APOBEC3D-202ENST00000427494 CFAP57Q96MR6 1250 aa14.67□□□□□ -0.06
APOBEC3D-202ENST00000427494 SNX25Q9H3E2 840 aa14.67□□□□□ -0.06
APOBEC3D-202ENST00000427494 MYADML2A6NDP7 307 aa14.66□□□□□ -0.06
APOBEC3D-202ENST00000427494 EBAG9O00559 213 aa14.66□□□□□ -0.06
APOBEC3D-202ENST00000427494 DPYSL4O14531 572 aa14.66□□□□□ -0.06
APOBEC3D-202ENST00000427494 SPTLC1O15269 473 aa14.66□□□□□ -0.06
APOBEC3D-202ENST00000427494 PRPSAP2O60256 369 aa14.66□□□□□ -0.06
APOBEC3D-202ENST00000427494 IGHA2P01877 340 aa14.66□□□□□ -0.06
APOBEC3D-202ENST00000427494 SLC10A3P09131 477 aa14.66□□□□□ -0.06
APOBEC3D-202ENST00000427494 C6orf222P0C671 652 aaPredicted RBP14.66□□□□□ -0.06
APOBEC3D-202ENST00000427494 ADORA2BP29275 332 aa14.66□□□□□ -0.06
APOBEC3D-202ENST00000427494 HOXC8P31273 242 aa14.66□□□□□ -0.06
APOBEC3D-202ENST00000427494 GNL1P36915 607 aaPredicted RBP14.66□□□□□ -0.06
APOBEC3D-202ENST00000427494 PNPLA4P41247 253 aa14.66□□□□□ -0.06
APOBEC3D-202ENST00000427494 MMP13P45452 471 aa14.66□□□□□ -0.06
APOBEC3D-202ENST00000427494 TAF6P49848 677 aa14.66□□□□□ -0.06
APOBEC3D-202ENST00000427494 CDH6P55285 790 aa14.66□□□□□ -0.06
APOBEC3D-202ENST00000427494 SNX16P57768 344 aa14.66□□□□□ -0.06
APOBEC3D-202ENST00000427494 SOX4Q06945 474 aaPredicted RBP14.66□□□□□ -0.06
APOBEC3D-202ENST00000427494 MMRN1Q13201 1228 aa14.66□□□□□ -0.06
APOBEC3D-202ENST00000427494 CCDC14Q49A88 953 aa14.66□□□□□ -0.06
APOBEC3D-202ENST00000427494 XKR4Q5GH76 650 aa14.66□□□□□ -0.06
APOBEC3D-202ENST00000427494 TWF2Q6IBS0 349 aaKnown RBP14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms