RNA–Protein interactions for RNA: ENST00000426722.5

NELFE-203, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-203ENST00000426722 C2orf78A6NCI8 922 aa13.75□□□□□ -0.21
NELFE-203ENST00000426722 SLC9A3R1O14745 358 aaPredicted RBP13.75□□□□□ -0.21
NELFE-203ENST00000426722 HCRTO43612 131 aa13.75□□□□□ -0.21
NELFE-203ENST00000426722 STX6O43752 255 aa13.75□□□□□ -0.21
NELFE-203ENST00000426722 STAU1O95793 577 aaKnown RBP13.75□□□□□ -0.21
NELFE-203ENST00000426722 TNNI1P19237 187 aa13.75□□□□□ -0.21
NELFE-203ENST00000426722 KCNA4P22459 653 aa13.75□□□□□ -0.21
NELFE-203ENST00000426722 GNL1P36915 607 aaPredicted RBP13.75□□□□□ -0.21
NELFE-203ENST00000426722 MPLP40238 635 aa13.75□□□□□ -0.21
NELFE-203ENST00000426722 PSMC1P62191 440 aaKnown RBP13.75□□□□□ -0.21
NELFE-203ENST00000426722 CYP27A1Q02318 531 aa13.75□□□□□ -0.21
NELFE-203ENST00000426722 SF3A2Q15428 464 aaKnown RBP13.75□□□□□ -0.21
NELFE-203ENST00000426722 E2F4Q16254 413 aa13.75□□□□□ -0.21
NELFE-203ENST00000426722 EPM2AIP1Q7L775 607 aaPredicted RBP13.75□□□□□ -0.21
NELFE-203ENST00000426722 IQUBQ8NA54 791 aa13.75□□□□□ -0.21
NELFE-203ENST00000426722 PCED1BQ96HM7 432 aa13.75□□□□□ -0.21
NELFE-203ENST00000426722 ZNF396Q96N95 335 aaPredicted RBP13.75□□□□□ -0.21
NELFE-203ENST00000426722 HHIPQ96QV1 700 aa13.75□□□□□ -0.21
NELFE-203ENST00000426722 DUSP15Q9H1R2 295 aaPredicted RBP13.75□□□□□ -0.21
NELFE-203ENST00000426722 SNX25Q9H3E2 840 aa13.75□□□□□ -0.21
NELFE-203ENST00000426722 MAGEF1Q9HAY2 307 aa13.75□□□□□ -0.21
NELFE-203ENST00000426722 NUP205Q92621 2012 aa13.74□□□□□ -0.21
NELFE-203ENST00000426722 PTPRJQ12913 1337 aa13.74□□□□□ -0.21
NELFE-203ENST00000426722 ZNF840PA6NDX5 716 aa13.74□□□□□ -0.21
NELFE-203ENST00000426722 LEFTY2O00292 366 aa13.74□□□□□ -0.21
NELFE-203ENST00000426722 SPTLC2O15270 562 aa13.74□□□□□ -0.21
NELFE-203ENST00000426722 OLFM2O95897 454 aa13.74□□□□□ -0.21
NELFE-203ENST00000426722 CST3P01034 146 aaPredicted RBP13.74□□□□□ -0.21
NELFE-203ENST00000426722 PDGFRBP09619 1106 aa13.74□□□□□ -0.21
NELFE-203ENST00000426722 PDIA4P13667 645 aaKnown RBP13.74□□□□□ -0.21
NELFE-203ENST00000426722 ATICP31939 592 aa13.74□□□□□ -0.21
NELFE-203ENST00000426722 EIF2DP41214 584 aaKnown RBP13.74□□□□□ -0.21
NELFE-203ENST00000426722 MRPS21P82921 87 aaKnown RBP13.74□□□□□ -0.21
NELFE-203ENST00000426722 PSMD6Q15008 389 aa13.74□□□□□ -0.21
NELFE-203ENST00000426722 SNRNP35Q16560 246 aaKnown RBP13.74□□□□□ -0.21
NELFE-203ENST00000426722 CCDC142Q17RM4 750 aa13.74□□□□□ -0.21
NELFE-203ENST00000426722 HSF5Q4G112 596 aaPredicted RBP13.74□□□□□ -0.21
NELFE-203ENST00000426722 USP39Q53GS9 565 aaKnown RBP13.74□□□□□ -0.21
NELFE-203ENST00000426722 FAM26FQ5R3K3 315 aa13.74□□□□□ -0.21
NELFE-203ENST00000426722 STPG1Q5TH74 334 aa13.74□□□□□ -0.21
NELFE-203ENST00000426722 TDRD10Q5VZ19 366 aaKnown RBP13.74□□□□□ -0.21
NELFE-203ENST00000426722 HS2ST1Q7LGA3 356 aa13.74□□□□□ -0.21
NELFE-203ENST00000426722 DDX42Q86XP3 938 aaKnown RBP eCLIP13.74□□□□□ -0.21
NELFE-203ENST00000426722 XXYLT1Q8NBI6 393 aa13.74□□□□□ -0.21
NELFE-203ENST00000426722 TSTD1Q8NFU3 115 aa13.74□□□□□ -0.21
NELFE-203ENST00000426722 OR6B3Q8NGW1 331 aa13.74□□□□□ -0.21
NELFE-203ENST00000426722 USP33Q8TEY7 942 aa13.74□□□□□ -0.21
NELFE-203ENST00000426722 EZH1Q92800 747 aaPredicted RBP13.74□□□□□ -0.21
NELFE-203ENST00000426722 FAM84AQ96KN4 292 aa13.74□□□□□ -0.21
NELFE-203ENST00000426722 SLITRK1Q96PX8 696 aa13.74□□□□□ -0.21
NELFE-203ENST00000426722 CGRRF1Q99675 332 aa13.74□□□□□ -0.21
NELFE-203ENST00000426722 C7orf25Q9BPX7 421 aa13.74□□□□□ -0.21
NELFE-203ENST00000426722 ELOVL4Q9GZR5 314 aa13.74□□□□□ -0.21
NELFE-203ENST00000426722 LINC00597Q9H2U6 94 aa13.74□□□□□ -0.21
NELFE-203ENST00000426722 FRYLO94915 3013 aa13.73□□□□□ -0.21
NELFE-203ENST00000426722 THADAQ6YHU6 1953 aa13.73□□□□□ -0.21
NELFE-203ENST00000426722 TGFB1I1O43294 461 aa13.73□□□□□ -0.21
NELFE-203ENST00000426722 CUTAO60888 179 aa13.73□□□□□ -0.21
NELFE-203ENST00000426722 YEATS4O95619 227 aa13.73□□□□□ -0.21
NELFE-203ENST00000426722 DLATP10515 647 aaKnown RBP13.73□□□□□ -0.21
NELFE-203ENST00000426722 PTPN1P18031 435 aaKnown RBP13.73□□□□□ -0.21
NELFE-203ENST00000426722 HOXD13P35453 343 aa13.73□□□□□ -0.21
NELFE-203ENST00000426722 OPRD1P41143 372 aa13.73□□□□□ -0.21
NELFE-203ENST00000426722 DGKEP52429 567 aa13.73□□□□□ -0.21
NELFE-203ENST00000426722 TNNC1P63316 161 aa13.73□□□□□ -0.21
NELFE-203ENST00000426722 ASIC1P78348 528 aa13.73□□□□□ -0.21
NELFE-203ENST00000426722 CYP24A1Q07973 514 aa13.73□□□□□ -0.21
NELFE-203ENST00000426722 TRPC3Q13507 836 aa13.73□□□□□ -0.21
NELFE-203ENST00000426722 WDR72Q3MJ13 1102 aa13.73□□□□□ -0.21
NELFE-203ENST00000426722 MDH1BQ5I0G3 518 aa13.73□□□□□ -0.21
NELFE-203ENST00000426722 UNC13DQ70J99 1090 aa13.73□□□□□ -0.21
NELFE-203ENST00000426722 RASSF3Q86WH2 238 aa13.73□□□□□ -0.21
NELFE-203ENST00000426722 C12orf56Q8IXR9 622 aa13.73□□□□□ -0.21
NELFE-203ENST00000426722 ADGRG2Q8IZP9 1017 aa13.73□□□□□ -0.21
NELFE-203ENST00000426722 RDH13Q8NBN7 331 aa13.73□□□□□ -0.21
NELFE-203ENST00000426722 TTC16Q8NEE8 873 aa13.73□□□□□ -0.21
NELFE-203ENST00000426722 PDZD8Q8NEN9 1154 aa13.73□□□□□ -0.21
NELFE-203ENST00000426722 OVCA2Q8WZ82 227 aa13.73□□□□□ -0.21
NELFE-203ENST00000426722 MRPL45Q9BRJ2 306 aaKnown RBP13.73□□□□□ -0.21
NELFE-203ENST00000426722 LSM14BQ9BX40 385 aaKnown RBP13.73□□□□□ -0.21
NELFE-203ENST00000426722 AGPAT3Q9NRZ7 376 aa13.73□□□□□ -0.21
NELFE-203ENST00000426722 TBC1D14Q9P2M4 693 aa13.73□□□□□ -0.21
NELFE-203ENST00000426722 A0A0A0MRY4 1105 aa13.72□□□□□ -0.21
NELFE-203ENST00000426722 BCLAF3A2AJT9 711 aaKnown RBP13.72□□□□□ -0.21
NELFE-203ENST00000426722 F8VP50 259 aa13.72□□□□□ -0.21
NELFE-203ENST00000426722 K7EQS6 105 aa13.72□□□□□ -0.21
NELFE-203ENST00000426722 RTN3O95197 1032 aaPredicted RBP13.72□□□□□ -0.21
NELFE-203ENST00000426722 CAVIN2O95810 425 aa13.72□□□□□ -0.21
NELFE-203ENST00000426722 OAS1P00973 400 aaKnown RBP13.72□□□□□ -0.21
NELFE-203ENST00000426722 PMLP29590 882 aa13.72□□□□□ -0.21
NELFE-203ENST00000426722 AP3M2P53677 418 aa13.72□□□□□ -0.21
NELFE-203ENST00000426722 USP46P62068 366 aa13.72□□□□□ -0.21
NELFE-203ENST00000426722 ZXDBP98169 803 aa13.72□□□□□ -0.21
NELFE-203ENST00000426722 CCDC6Q16204 474 aa13.72□□□□□ -0.21
NELFE-203ENST00000426722 RNF43Q68DV7 783 aa13.72□□□□□ -0.21
NELFE-203ENST00000426722 NAIF1Q69YI7 327 aaPredicted RBP13.72□□□□□ -0.21
NELFE-203ENST00000426722 NUP93Q8N1F7 819 aa13.72□□□□□ -0.21
NELFE-203ENST00000426722 GLIS3Q8NEA6 775 aa13.72□□□□□ -0.21
NELFE-203ENST00000426722 HPS3Q969F9 1004 aa13.72□□□□□ -0.21
NELFE-203ENST00000426722 SYAP1Q96A49 352 aaPredicted RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms