RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 GRAMD1AQ96CP6 724 aa16.7■□□□□ 0.26
PKP4-205ENST00000426248 OSMRQ99650 979 aa16.7■□□□□ 0.26
PKP4-205ENST00000426248 LRMDAQ9H2I8 198 aa16.7■□□□□ 0.26
PKP4-205ENST00000426248 ADAM7Q9H2U9 754 aa16.7■□□□□ 0.26
PKP4-205ENST00000426248 PIN4Q9Y237 131 aaKnown RBP16.7■□□□□ 0.26
PKP4-205ENST00000426248 COMMD3-BMI1R4GMX3 469 aa16.7■□□□□ 0.26
PKP4-205ENST00000426248 VAV1P15498 845 aa16.69■□□□□ 0.26
PKP4-205ENST00000426248 ZFXP17010 805 aaPredicted RBP16.69■□□□□ 0.26
PKP4-205ENST00000426248 ADCY8P40145 1251 aa16.69■□□□□ 0.26
PKP4-205ENST00000426248 DSG1Q02413 1049 aa16.69■□□□□ 0.26
PKP4-205ENST00000426248 MED21Q13503 144 aa16.69■□□□□ 0.26
PKP4-205ENST00000426248 CAPSQ13938 189 aa16.69■□□□□ 0.26
PKP4-205ENST00000426248 MESDQ14696 234 aa16.69■□□□□ 0.26
PKP4-205ENST00000426248 GALNTL6Q49A17 601 aa16.69■□□□□ 0.26
PKP4-205ENST00000426248 FOXB2Q5VYV0 432 aa16.69■□□□□ 0.26
PKP4-205ENST00000426248 SOCS4Q8WXH5 440 aa16.69■□□□□ 0.26
PKP4-205ENST00000426248 CHORDC1Q9UHD1 332 aaPredicted RBP16.69■□□□□ 0.26
PKP4-205ENST00000426248 MAFBQ9Y5Q3 323 aaPredicted RBP16.69■□□□□ 0.26
PKP4-205ENST00000426248 SERPINB6P35237 376 aa16.69■□□□□ 0.26
PKP4-205ENST00000426248 GTF2BQ00403 316 aa16.69■□□□□ 0.26
PKP4-205ENST00000426248 SP3Q02447 781 aa16.69■□□□□ 0.26
PKP4-205ENST00000426248 PPP2R5EQ16537 467 aa16.69■□□□□ 0.26
PKP4-205ENST00000426248 ZNF484Q5JVG2 852 aa16.69■□□□□ 0.26
PKP4-205ENST00000426248 EIF1ADQ8N9N8 165 aaKnown RBP16.69■□□□□ 0.26
PKP4-205ENST00000426248 CKAP2Q8WWK9 683 aa16.69■□□□□ 0.26
PKP4-205ENST00000426248 NR1H4Q96RI1 486 aaPredicted RBP16.69■□□□□ 0.26
PKP4-205ENST00000426248 WASF2Q9Y6W5 498 aa16.69■□□□□ 0.26
PKP4-205ENST00000426248 CCDC22O60826 627 aa16.69■□□□□ 0.26
PKP4-205ENST00000426248 ITGBL1O95965 494 aaPredicted RBP16.69■□□□□ 0.26
PKP4-205ENST00000426248 PTPN4P29074 926 aa16.69■□□□□ 0.26
PKP4-205ENST00000426248 RPL21P46778 160 aaKnown RBP16.69■□□□□ 0.26
PKP4-205ENST00000426248 SEPT6Q14141 434 aa16.69■□□□□ 0.26
PKP4-205ENST00000426248 DUSP28Q4G0W2 176 aa16.69■□□□□ 0.26
PKP4-205ENST00000426248 CBWD6Q4V339 395 aa16.69■□□□□ 0.26
PKP4-205ENST00000426248 CBWD3Q5JTY5 395 aa16.69■□□□□ 0.26
PKP4-205ENST00000426248 CBWD5Q5RIA9 395 aa16.69■□□□□ 0.26
PKP4-205ENST00000426248 C1orf146Q5VVC0 180 aa16.69■□□□□ 0.26
PKP4-205ENST00000426248 CATSPER2Q96P56 530 aa16.69■□□□□ 0.26
PKP4-205ENST00000426248 ZIC5Q96T25 663 aa16.69■□□□□ 0.26
PKP4-205ENST00000426248 TSC22D4Q9Y3Q8 395 aa16.69■□□□□ 0.26
PKP4-205ENST00000426248 PCDHA2Q9Y5H9 948 aa16.69■□□□□ 0.26
PKP4-205ENST00000426248 PYGMP11217 842 aa16.68■□□□□ 0.26
PKP4-205ENST00000426248 HNRNPH3P31942 346 aaKnown RBP16.68■□□□□ 0.26
PKP4-205ENST00000426248 PARP6Q2NL67 630 aa16.68■□□□□ 0.26
PKP4-205ENST00000426248 HGSNATQ68CP4 663 aa16.68■□□□□ 0.26
PKP4-205ENST00000426248 MARK2Q7KZI7 788 aaKnown RBP16.68■□□□□ 0.26
PKP4-205ENST00000426248 GSTA5Q7RTV2 222 aa16.68■□□□□ 0.26
PKP4-205ENST00000426248 MAP4K3Q8IVH8 894 aa16.68■□□□□ 0.26
PKP4-205ENST00000426248 ZSWIM2Q8NEG5 633 aa16.68■□□□□ 0.26
PKP4-205ENST00000426248 C9orf72Q96LT7 481 aa16.68■□□□□ 0.26
PKP4-205ENST00000426248 APEX2Q9UBZ4 518 aa16.68■□□□□ 0.26
PKP4-205ENST00000426248 NUDT17P0C025 328 aa16.68■□□□□ 0.26
PKP4-205ENST00000426248 SPARCL1Q14515 664 aa16.68■□□□□ 0.26
PKP4-205ENST00000426248 NLRP9Q7RTR0 991 aa16.68■□□□□ 0.26
PKP4-205ENST00000426248 DNAJB3Q8WWF6 145 aa16.68■□□□□ 0.26
PKP4-205ENST00000426248 CDC42EP4Q9H3Q1 356 aaKnown RBP16.68■□□□□ 0.26
PKP4-205ENST00000426248 RNF19AQ9NV58 838 aa16.68■□□□□ 0.26
PKP4-205ENST00000426248 PSMG1O95456 288 aa16.68■□□□□ 0.26
PKP4-205ENST00000426248 ITGA2BP08514 1039 aa16.68■□□□□ 0.26
PKP4-205ENST00000426248 GPC3P51654 580 aa16.68■□□□□ 0.26
PKP4-205ENST00000426248 MTFR1Q15390 333 aa16.68■□□□□ 0.26
PKP4-205ENST00000426248 TMEM270Q6UE05 265 aa16.68■□□□□ 0.26
PKP4-205ENST00000426248 TAS1R2Q8TE23 839 aa16.68■□□□□ 0.26
PKP4-205ENST00000426248 VPS37BQ9H9H4 285 aa16.68■□□□□ 0.26
PKP4-205ENST00000426248 RAB20Q9NX57 234 aa16.68■□□□□ 0.26
PKP4-205ENST00000426248 LSM1O15116 133 aaKnown RBP16.68■□□□□ 0.26
PKP4-205ENST00000426248 CYP26A1O43174 497 aa16.68■□□□□ 0.26
PKP4-205ENST00000426248 GJB6O95452 261 aa16.68■□□□□ 0.26
PKP4-205ENST00000426248 STAMBPO95630 424 aa16.68■□□□□ 0.26
PKP4-205ENST00000426248 FSCN1Q16658 493 aaKnown RBP16.68■□□□□ 0.26
PKP4-205ENST00000426248 NAGPAQ9UK23 515 aa16.68■□□□□ 0.26
PKP4-205ENST00000426248 FAM187AA6NFU0 413 aa16.67■□□□□ 0.26
PKP4-205ENST00000426248 UNCXA6NJT0 531 aa16.67■□□□□ 0.26
PKP4-205ENST00000426248 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.67■□□□□ 0.26
PKP4-205ENST00000426248 EXTL3O43909 919 aa16.67■□□□□ 0.26
PKP4-205ENST00000426248 MAFO75444 373 aaPredicted RBP16.67■□□□□ 0.26
PKP4-205ENST00000426248 TOMM70O94826 608 aa16.67■□□□□ 0.26
PKP4-205ENST00000426248 AKR1A1P14550 325 aa16.67■□□□□ 0.26
PKP4-205ENST00000426248 EIF4BP23588 611 aaKnown RBP16.67■□□□□ 0.26
PKP4-205ENST00000426248 KLC3Q6P597 504 aa16.67■□□□□ 0.26
PKP4-205ENST00000426248 RGS9BPQ6ZS82 235 aa16.67■□□□□ 0.26
PKP4-205ENST00000426248 ASRGL1Q7L266 308 aa16.67■□□□□ 0.26
PKP4-205ENST00000426248 MAGEB18Q96M61 343 aa16.67■□□□□ 0.26
PKP4-205ENST00000426248 PFDN4Q9NQP4 134 aa16.67■□□□□ 0.26
PKP4-205ENST00000426248 TBX10O75333 385 aa16.67■□□□□ 0.26
PKP4-205ENST00000426248 TOM1L1O75674 476 aa16.67■□□□□ 0.26
PKP4-205ENST00000426248 LRRC8BQ6P9F7 803 aa16.67■□□□□ 0.26
PKP4-205ENST00000426248 ZNF571Q7Z3V5 609 aaPredicted RBP16.67■□□□□ 0.26
PKP4-205ENST00000426248 TMEM110Q86TL2 294 aa16.67■□□□□ 0.26
PKP4-205ENST00000426248 PASD1Q8IV76 773 aa16.67■□□□□ 0.26
PKP4-205ENST00000426248 SMYD3Q9H7B4 428 aa16.67■□□□□ 0.26
PKP4-205ENST00000426248 MAGEB3O15480 346 aa16.67■□□□□ 0.26
PKP4-205ENST00000426248 MAPTP10636 758 aaKnown RBP16.67■□□□□ 0.26
PKP4-205ENST00000426248 CCNG1P51959 295 aa16.67■□□□□ 0.26
PKP4-205ENST00000426248 PPP3CAQ08209 521 aa16.67■□□□□ 0.26
PKP4-205ENST00000426248 DUOXA2Q1HG44 320 aa16.67■□□□□ 0.26
PKP4-205ENST00000426248 EPC2Q52LR7 807 aa16.67■□□□□ 0.26
PKP4-205ENST00000426248 RNF43Q68DV7 783 aa16.67■□□□□ 0.26
PKP4-205ENST00000426248 PLPPR4Q7Z2D5 763 aa16.67■□□□□ 0.26
PKP4-205ENST00000426248 APBA2Q99767 749 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms