RNA–Protein interactions for RNA: ENST00000425254.2

LINC01534-201, Transcript of long intergenic non-protein coding RNA 1534, humanhuman

TSL 2 BASIC

Gene LINC01534, Length 815 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01534-201ENST00000425254 DMAP1Q9NPF5 467 aaPredicted RBP16.52■□□□□ 0.24
LINC01534-201ENST00000425254 ABHD10Q9NUJ1 306 aa16.52■□□□□ 0.24
LINC01534-201ENST00000425254 HESX1Q9UBX0 185 aa16.52■□□□□ 0.24
LINC01534-201ENST00000425254 CDH22Q9UJ99 828 aa16.52■□□□□ 0.24
LINC01534-201ENST00000425254 FAM170AA1A519 330 aa16.51■□□□□ 0.23
LINC01534-201ENST00000425254 TNFRSF10BO14763 440 aa16.51■□□□□ 0.23
LINC01534-201ENST00000425254 NCK2O43639 380 aa16.51■□□□□ 0.23
LINC01534-201ENST00000425254 HOXA9P31269 272 aa16.51■□□□□ 0.23
LINC01534-201ENST00000425254 ALDH1A3P47895 512 aa16.51■□□□□ 0.23
LINC01534-201ENST00000425254 BCAT1P54687 386 aa16.51■□□□□ 0.23
LINC01534-201ENST00000425254 USP46P62068 366 aa16.51■□□□□ 0.23
LINC01534-201ENST00000425254 RPL10AP62906 217 aaKnown RBP16.51■□□□□ 0.23
LINC01534-201ENST00000425254 KLHL30Q0D2K2 578 aa16.51■□□□□ 0.23
LINC01534-201ENST00000425254 BST2Q10589 180 aaKnown RBP16.51■□□□□ 0.23
LINC01534-201ENST00000425254 MEA1Q16626 185 aa16.51■□□□□ 0.23
LINC01534-201ENST00000425254 PMF1Q6P1K2 205 aa16.51■□□□□ 0.23
LINC01534-201ENST00000425254 TMC5Q6UXY8 1006 aa16.51■□□□□ 0.23
LINC01534-201ENST00000425254 RTL10Q7L3V2 364 aa16.51■□□□□ 0.23
LINC01534-201ENST00000425254 PIGZQ86VD9 579 aa16.51■□□□□ 0.23
LINC01534-201ENST00000425254 ZNF677Q86XU0 584 aa16.51■□□□□ 0.23
LINC01534-201ENST00000425254 CMASQ8NFW8 434 aaPredicted RBP16.51■□□□□ 0.23
LINC01534-201ENST00000425254 MSLNLQ96KJ4 702 aa16.51■□□□□ 0.23
LINC01534-201ENST00000425254 SPATA17Q96L03 361 aa16.51■□□□□ 0.23
LINC01534-201ENST00000425254 AGPAT1Q99943 283 aa16.51■□□□□ 0.23
LINC01534-201ENST00000425254 APOL5Q9BWW9 433 aa16.51■□□□□ 0.23
LINC01534-201ENST00000425254 S1PR5Q9H228 398 aa16.51■□□□□ 0.23
LINC01534-201ENST00000425254 LHX5Q9H2C1 402 aa16.51■□□□□ 0.23
LINC01534-201ENST00000425254 DZANK1Q9NVP4 752 aa16.51■□□□□ 0.23
LINC01534-201ENST00000425254 ZDHHC7Q9NXF8 308 aa16.51■□□□□ 0.23
LINC01534-201ENST00000425254 ARHGAP20Q9P2F6 1191 aa16.51■□□□□ 0.23
LINC01534-201ENST00000425254 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.5■□□□□ 0.23
LINC01534-201ENST00000425254 CCDC195A0A1B0GUA6 201 aa16.5■□□□□ 0.23
LINC01534-201ENST00000425254 SLC38A8A6NNN8 435 aa16.5■□□□□ 0.23
LINC01534-201ENST00000425254 XPO1O14980 1071 aaKnown RBP16.5■□□□□ 0.23
LINC01534-201ENST00000425254 TRIM66O15016 1216 aa16.5■□□□□ 0.23
LINC01534-201ENST00000425254 LRG1P02750 347 aa16.5■□□□□ 0.23
LINC01534-201ENST00000425254 TPM1P09493 284 aa16.5■□□□□ 0.23
LINC01534-201ENST00000425254 HNRNPA1P09651 372 aaKnown RBP eCLIP16.5■□□□□ 0.23
LINC01534-201ENST00000425254 CCDC172P0C7W6 258 aa16.5■□□□□ 0.23
LINC01534-201ENST00000425254 SETSIPP0DME0 302 aa16.5■□□□□ 0.23
LINC01534-201ENST00000425254 HMGA1P17096 107 aaKnown RBP16.5■□□□□ 0.23
LINC01534-201ENST00000425254 CDH5P33151 784 aaPredicted RBP16.5■□□□□ 0.23
LINC01534-201ENST00000425254 RARS2Q5T160 578 aaKnown RBP16.5■□□□□ 0.23
LINC01534-201ENST00000425254 EP400NLQ6ZTU2 488 aa16.5■□□□□ 0.23
LINC01534-201ENST00000425254 DNAJB7Q7Z6W7 309 aaPredicted RBP16.5■□□□□ 0.23
LINC01534-201ENST00000425254 CNGA4Q8IV77 575 aa16.5■□□□□ 0.23
LINC01534-201ENST00000425254 FMNL3Q8IVF7 1028 aa16.5■□□□□ 0.23
LINC01534-201ENST00000425254 C1orf131Q8NDD1 294 aaKnown RBP16.5■□□□□ 0.23
LINC01534-201ENST00000425254 LRRC3Q9BY71 257 aa16.5■□□□□ 0.23
LINC01534-201ENST00000425254 PRKD2Q9BZL6 878 aa16.5■□□□□ 0.23
LINC01534-201ENST00000425254 SFXN1Q9H9B4 322 aa16.5■□□□□ 0.23
LINC01534-201ENST00000425254 ZNF334Q9HCZ1 680 aaPredicted RBP16.5■□□□□ 0.23
LINC01534-201ENST00000425254 HCFC1R1Q9NWW0 138 aa16.5■□□□□ 0.23
LINC01534-201ENST00000425254 IMPACTQ9P2X3 320 aa16.5■□□□□ 0.23
LINC01534-201ENST00000425254 DPP7Q9UHL4 492 aa16.5■□□□□ 0.23
LINC01534-201ENST00000425254 DDX3XO00571 662 aaKnown RBP eCLIP16.49■□□□□ 0.23
LINC01534-201ENST00000425254 NRG2O14511 850 aaPredicted RBP16.49■□□□□ 0.23
LINC01534-201ENST00000425254 CYP1A1P04798 512 aaPredicted RBP16.49■□□□□ 0.23
LINC01534-201ENST00000425254 SERPING1P05155 500 aa16.49■□□□□ 0.23
LINC01534-201ENST00000425254 POU2F2P09086 479 aa16.49■□□□□ 0.23
LINC01534-201ENST00000425254 ANXA13P27216 316 aa16.49■□□□□ 0.23
LINC01534-201ENST00000425254 PLA2G4AP47712 749 aa16.49■□□□□ 0.23
LINC01534-201ENST00000425254 RGS7P49802 495 aa16.49■□□□□ 0.23
LINC01534-201ENST00000425254 SLC5A3P53794 718 aa16.49■□□□□ 0.23
LINC01534-201ENST00000425254 EPHB3P54753 998 aa16.49■□□□□ 0.23
LINC01534-201ENST00000425254 PLD1Q13393 1074 aa16.49■□□□□ 0.23
LINC01534-201ENST00000425254 HS6ST3Q8IZP7 471 aa16.49■□□□□ 0.23
LINC01534-201ENST00000425254 SCAMP5Q8TAC9 235 aa16.49■□□□□ 0.23
LINC01534-201ENST00000425254 PSMG2Q969U7 264 aa16.49■□□□□ 0.23
LINC01534-201ENST00000425254 CHP1Q99653 195 aa16.49■□□□□ 0.23
LINC01534-201ENST00000425254 UBXN6Q9BZV1 441 aa16.49■□□□□ 0.23
LINC01534-201ENST00000425254 IL37Q9NZH6 218 aa16.49■□□□□ 0.23
LINC01534-201ENST00000425254 DNMT3BQ9UBC3 853 aaKnown RBP16.49■□□□□ 0.23
LINC01534-201ENST00000425254 TJP2Q9UDY2 1190 aa16.49■□□□□ 0.23
LINC01534-201ENST00000425254 REV3LO60673 3130 aa16.49■□□□□ 0.23
LINC01534-201ENST00000425254 SPDYE4A6NLX3 237 aa16.48■□□□□ 0.23
LINC01534-201ENST00000425254 H3BQ06 376 aaPredicted RBP16.48■□□□□ 0.23
LINC01534-201ENST00000425254 SRGAP2BP0DMP2 458 aa16.48■□□□□ 0.23
LINC01534-201ENST00000425254 HOXB8P17481 243 aaPredicted RBP16.48■□□□□ 0.23
LINC01534-201ENST00000425254 RPL34P49207 117 aaKnown RBP16.48■□□□□ 0.23
LINC01534-201ENST00000425254 NOMO3P69849 1222 aa16.48■□□□□ 0.23
LINC01534-201ENST00000425254 NTHL1P78549 312 aa16.48■□□□□ 0.23
LINC01534-201ENST00000425254 PDCLQ13371 301 aa16.48■□□□□ 0.23
LINC01534-201ENST00000425254 SKIV2LQ15477 1246 aaKnown RBP16.48■□□□□ 0.23
LINC01534-201ENST00000425254 CLUL1Q15846 466 aa16.48■□□□□ 0.23
LINC01534-201ENST00000425254 TDRD12Q587J7 1177 aaKnown RBP16.48■□□□□ 0.23
LINC01534-201ENST00000425254 RAB41Q5JT25 222 aa16.48■□□□□ 0.23
LINC01534-201ENST00000425254 ELMSAN1Q6PJG2 1045 aa16.48■□□□□ 0.23
LINC01534-201ENST00000425254 DENND5BQ6ZUT9 1274 aa16.48■□□□□ 0.23
LINC01534-201ENST00000425254 GPR149Q86SP6 731 aa16.48■□□□□ 0.23
LINC01534-201ENST00000425254 TMC8Q8IU68 726 aa16.48■□□□□ 0.23
LINC01534-201ENST00000425254 NUP93Q8N1F7 819 aa16.48■□□□□ 0.23
LINC01534-201ENST00000425254 MAFAQ8NHW3 353 aaPredicted RBP16.48■□□□□ 0.23
LINC01534-201ENST00000425254 SLC30A5Q8TAD4 765 aa16.48■□□□□ 0.23
LINC01534-201ENST00000425254 KCTD13Q8WZ19 329 aa16.48■□□□□ 0.23
LINC01534-201ENST00000425254 CEP295NLQ96MC4 621 aa16.48■□□□□ 0.23
LINC01534-201ENST00000425254 SLC4A5Q9BY07 1137 aa16.48■□□□□ 0.23
LINC01534-201ENST00000425254 PDCL3Q9H2J4 239 aa16.48■□□□□ 0.23
LINC01534-201ENST00000425254 UBE2ZQ9H832 354 aaPredicted RBP16.48■□□□□ 0.23
LINC01534-201ENST00000425254 PNPLA8Q9NP80 782 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms