RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 GPR88Q9GZN0 384 aa19.57■□□□□ 0.72
HDAC6-205ENST00000423941 PNPLA8Q9NP80 782 aa19.57■□□□□ 0.72
HDAC6-205ENST00000423941 DMAP1Q9NPF5 467 aaPredicted RBP19.57■□□□□ 0.72
HDAC6-205ENST00000423941 COMMD8Q9NX08 183 aa19.57■□□□□ 0.72
HDAC6-205ENST00000423941 UXTQ9UBK9 157 aaPredicted RBP19.57■□□□□ 0.72
HDAC6-205ENST00000423941 LIMD1Q9UGP4 676 aa19.57■□□□□ 0.72
HDAC6-205ENST00000423941 AJAP1Q9UKB5 411 aaPredicted RBP19.57■□□□□ 0.72
HDAC6-205ENST00000423941 SIK3Q9Y2K2 1263 aa19.57■□□□□ 0.72
HDAC6-205ENST00000423941 PCDHB4Q9Y5E5 795 aa19.57■□□□□ 0.72
HDAC6-205ENST00000423941 TRIOO75962 3097 aa19.56■□□□□ 0.72
HDAC6-205ENST00000423941 A0A1W2PRU2 124 aa19.56■□□□□ 0.72
HDAC6-205ENST00000423941 BECN2A8MW95 431 aa19.56■□□□□ 0.72
HDAC6-205ENST00000423941 TADA3O75528 432 aa19.56■□□□□ 0.72
HDAC6-205ENST00000423941 CDK11BP21127 795 aaKnown RBP19.56■□□□□ 0.72
HDAC6-205ENST00000423941 SP100P23497 879 aaPredicted RBP19.56■□□□□ 0.72
HDAC6-205ENST00000423941 GABRR2P28476 465 aa19.56■□□□□ 0.72
HDAC6-205ENST00000423941 WEE1P30291 646 aa19.56■□□□□ 0.72
HDAC6-205ENST00000423941 SSTR3P32745 418 aaPredicted RBP19.56■□□□□ 0.72
HDAC6-205ENST00000423941 USP46P62068 366 aa19.56■□□□□ 0.72
HDAC6-205ENST00000423941 PKDCCQ504Y2 493 aa19.56■□□□□ 0.72
HDAC6-205ENST00000423941 KLHDC7AQ5VTJ3 777 aa19.56■□□□□ 0.72
HDAC6-205ENST00000423941 NUP93Q8N1F7 819 aa19.56■□□□□ 0.72
HDAC6-205ENST00000423941 ANKRD52Q8NB46 1076 aa19.56■□□□□ 0.72
HDAC6-205ENST00000423941 ANKRD20A12PQ8NF67 263 aa19.56■□□□□ 0.72
HDAC6-205ENST00000423941 TFAP2BQ92481 460 aa19.56■□□□□ 0.72
HDAC6-205ENST00000423941 KHSRPQ92945 711 aaKnown RBP eCLIP19.56■□□□□ 0.72
HDAC6-205ENST00000423941 ZSWIM3Q96MP5 696 aa19.56■□□□□ 0.72
HDAC6-205ENST00000423941 ERGIC2Q96RQ1 377 aa19.56■□□□□ 0.72
HDAC6-205ENST00000423941 ZSWIM1Q9BR11 485 aa19.56■□□□□ 0.72
HDAC6-205ENST00000423941 MED10Q9BTT4 135 aa19.56■□□□□ 0.72
HDAC6-205ENST00000423941 TRPV4Q9HBA0 871 aa19.56■□□□□ 0.72
HDAC6-205ENST00000423941 KRT82Q9NSB4 513 aa19.56■□□□□ 0.72
HDAC6-205ENST00000423941 O00370 1275 aa19.55■□□□□ 0.72
HDAC6-205ENST00000423941 TPM2P07951 284 aa19.55■□□□□ 0.72
HDAC6-205ENST00000423941 FAM200BP0CF97 657 aa19.55■□□□□ 0.72
HDAC6-205ENST00000423941 GJA1P17302 382 aa19.55■□□□□ 0.72
HDAC6-205ENST00000423941 ANXA13P27216 316 aa19.55■□□□□ 0.72
HDAC6-205ENST00000423941 ADORA2BP29275 332 aa19.55■□□□□ 0.72
HDAC6-205ENST00000423941 CDC25CP30307 473 aa19.55■□□□□ 0.72
HDAC6-205ENST00000423941 HTR4Q13639 388 aa19.55■□□□□ 0.72
HDAC6-205ENST00000423941 CNGA2Q16280 664 aa19.55■□□□□ 0.72
HDAC6-205ENST00000423941 SGO2Q562F6 1265 aa19.55■□□□□ 0.72
HDAC6-205ENST00000423941 LRSAM1Q6UWE0 723 aa19.55■□□□□ 0.72
HDAC6-205ENST00000423941 RBBP8NLQ8NC74 664 aaPredicted RBP19.55■□□□□ 0.72
HDAC6-205ENST00000423941 NUP210Q8TEM1 1887 aaPredicted RBP19.55■□□□□ 0.72
HDAC6-205ENST00000423941 ING5Q8WYH8 240 aa19.55■□□□□ 0.72
HDAC6-205ENST00000423941 MCRS1Q96EZ8 462 aa19.55■□□□□ 0.72
HDAC6-205ENST00000423941 KCNK12Q9HB15 430 aa19.55■□□□□ 0.72
HDAC6-205ENST00000423941 EHD2Q9NZN4 543 aa19.55■□□□□ 0.72
HDAC6-205ENST00000423941 IGSF9Q9P2J2 1179 aa19.55■□□□□ 0.72
HDAC6-205ENST00000423941 ZMYM5Q9UJ78 669 aa19.55■□□□□ 0.72
HDAC6-205ENST00000423941 DNAJC12Q9UKB3 198 aa19.55■□□□□ 0.72
HDAC6-205ENST00000423941 TNFRSF10AO00220 468 aa19.54■□□□□ 0.72
HDAC6-205ENST00000423941 UCHL3P15374 230 aa19.54■□□□□ 0.72
HDAC6-205ENST00000423941 NPR3P17342 541 aa19.54■□□□□ 0.72
HDAC6-205ENST00000423941 RFX1P22670 979 aa19.54■□□□□ 0.72
HDAC6-205ENST00000423941 MAP3K7CLP57077 242 aa19.54■□□□□ 0.72
HDAC6-205ENST00000423941 TEAD2Q15562 447 aa19.54■□□□□ 0.72
HDAC6-205ENST00000423941 TAF12Q16514 161 aa19.54■□□□□ 0.72
HDAC6-205ENST00000423941 LCLAT1Q6UWP7 414 aa19.54■□□□□ 0.72
HDAC6-205ENST00000423941 LUZP1Q86V48 1076 aa19.54■□□□□ 0.72
HDAC6-205ENST00000423941 TTC30AQ86WT1 665 aa19.54■□□□□ 0.72
HDAC6-205ENST00000423941 ASB16Q96NS5 453 aa19.54■□□□□ 0.72
HDAC6-205ENST00000423941 GANQ9H2C0 597 aa19.54■□□□□ 0.72
HDAC6-205ENST00000423941 ATXN3LQ9H3M9 355 aa19.54■□□□□ 0.72
HDAC6-205ENST00000423941 RTN4Q9NQC3 1192 aaKnown RBP19.54■□□□□ 0.72
HDAC6-205ENST00000423941 NCANO14594 1321 aa19.53■□□□□ 0.72
HDAC6-205ENST00000423941 FOXN3O00409 490 aaPredicted RBP19.53■□□□□ 0.72
HDAC6-205ENST00000423941 PES1O00541 588 aaKnown RBP19.53■□□□□ 0.72
HDAC6-205ENST00000423941 RTN3O95197 1032 aaPredicted RBP19.53■□□□□ 0.72
HDAC6-205ENST00000423941 FCARP24071 287 aa19.53■□□□□ 0.72
HDAC6-205ENST00000423941 PPP3CCP48454 512 aa19.53■□□□□ 0.72
HDAC6-205ENST00000423941 ZNF445P59923 1031 aa19.53■□□□□ 0.72
HDAC6-205ENST00000423941 SNX30Q5VWJ9 437 aa19.53■□□□□ 0.72
HDAC6-205ENST00000423941 FAM71AQ8IYT1 594 aa19.53■□□□□ 0.72
HDAC6-205ENST00000423941 SCAMP5Q8TAC9 235 aa19.53■□□□□ 0.72
HDAC6-205ENST00000423941 FGF14Q92915 247 aa19.53■□□□□ 0.72
HDAC6-205ENST00000423941 SLC46A2Q9BY10 475 aa19.53■□□□□ 0.72
HDAC6-205ENST00000423941 TASP1Q9H6P5 420 aa19.53■□□□□ 0.72
HDAC6-205ENST00000423941 MAGED2Q9UNF1 606 aaPredicted RBP19.53■□□□□ 0.72
HDAC6-205ENST00000423941 DAAM1Q9Y4D1 1078 aa19.53■□□□□ 0.72
HDAC6-205ENST00000423941 USP3Q9Y6I4 520 aa19.53■□□□□ 0.72
HDAC6-205ENST00000423941 A0A1B0GTH6 734 aa19.52■□□□□ 0.72
HDAC6-205ENST00000423941 PI4K2BG5E9Z4 385 aa19.52■□□□□ 0.72
HDAC6-205ENST00000423941 ZDHHC11BP0C7U3 371 aa19.52■□□□□ 0.72
HDAC6-205ENST00000423941 DDX6P26196 483 aaKnown RBP eCLIP19.52■□□□□ 0.72
HDAC6-205ENST00000423941 SLC5A3P53794 718 aa19.52■□□□□ 0.72
HDAC6-205ENST00000423941 STILQ15468 1287 aa19.52■□□□□ 0.72
HDAC6-205ENST00000423941 MEA1Q16626 185 aa19.52■□□□□ 0.72
HDAC6-205ENST00000423941 PTPN21Q16825 1174 aa19.52■□□□□ 0.72
HDAC6-205ENST00000423941 ARHGAP44Q17R89 818 aa19.52■□□□□ 0.72
HDAC6-205ENST00000423941 RAB41Q5JT25 222 aa19.52■□□□□ 0.72
HDAC6-205ENST00000423941 FAM78AQ5JUQ0 283 aa19.52■□□□□ 0.72
HDAC6-205ENST00000423941 FKBP15Q5T1M5 1219 aa19.52■□□□□ 0.72
HDAC6-205ENST00000423941 STXBP5Q5T5C0 1151 aa19.52■□□□□ 0.72
HDAC6-205ENST00000423941 PARM1Q6UWI2 310 aa19.52■□□□□ 0.72
HDAC6-205ENST00000423941 MTSS1LQ765P7 747 aa19.52■□□□□ 0.72
HDAC6-205ENST00000423941 MON1AQ86VX9 555 aa19.52■□□□□ 0.72
HDAC6-205ENST00000423941 SLC44A3Q8N4M1 653 aa19.52■□□□□ 0.72
HDAC6-205ENST00000423941 OVCA2Q8WZ82 227 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms