RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 RARS2Q5T160 578 aaKnown RBP17.98■□□□□ 0.47
COL7A1-202ENST00000422991 SDHAF4Q5VUM1 108 aa17.98■□□□□ 0.47
COL7A1-202ENST00000422991 EP400NLQ6ZTU2 488 aa17.98■□□□□ 0.47
COL7A1-202ENST00000422991 IRF2BP2Q7Z5L9 587 aa17.98■□□□□ 0.47
COL7A1-202ENST00000422991 SLC20A1Q8WUM9 679 aa17.98■□□□□ 0.47
COL7A1-202ENST00000422991 SYN2Q92777 582 aaPredicted RBP17.98■□□□□ 0.47
COL7A1-202ENST00000422991 SPATA17Q96L03 361 aa17.98■□□□□ 0.47
COL7A1-202ENST00000422991 CEP295NLQ96MC4 621 aa17.98■□□□□ 0.47
COL7A1-202ENST00000422991 KCNK16Q96T55 309 aa17.98■□□□□ 0.47
COL7A1-202ENST00000422991 PRKD2Q9BZL6 878 aa17.98■□□□□ 0.47
COL7A1-202ENST00000422991 PCDHGC3Q9UN70 934 aa17.98■□□□□ 0.47
COL7A1-202ENST00000422991 MYO16Q9Y6X6 1858 aa17.98■□□□□ 0.47
COL7A1-202ENST00000422991 ZNF638Q14966 1978 aaKnown RBP17.98■□□□□ 0.47
COL7A1-202ENST00000422991 DENND4AQ7Z401 1863 aa17.97■□□□□ 0.47
COL7A1-202ENST00000422991 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.97■□□□□ 0.47
COL7A1-202ENST00000422991 CCDC195A0A1B0GUA6 201 aa17.97■□□□□ 0.47
COL7A1-202ENST00000422991 MFAP3LO75121 409 aa17.97■□□□□ 0.47
COL7A1-202ENST00000422991 XYLBO75191 536 aa17.97■□□□□ 0.47
COL7A1-202ENST00000422991 CFHP08603 1231 aa17.97■□□□□ 0.47
COL7A1-202ENST00000422991 CCDC172P0C7W6 258 aa17.97■□□□□ 0.47
COL7A1-202ENST00000422991 SETSIPP0DME0 302 aa17.97■□□□□ 0.47
COL7A1-202ENST00000422991 KRT9P35527 623 aa17.97■□□□□ 0.47
COL7A1-202ENST00000422991 PRKCIP41743 596 aa17.97■□□□□ 0.47
COL7A1-202ENST00000422991 EPHB3P54753 998 aa17.97■□□□□ 0.47
COL7A1-202ENST00000422991 TFF2Q03403 129 aa17.97■□□□□ 0.47
COL7A1-202ENST00000422991 PDE4CQ08493 712 aa17.97■□□□□ 0.47
COL7A1-202ENST00000422991 ARID5BQ14865 1188 aa17.97■□□□□ 0.47
COL7A1-202ENST00000422991 VEPH1Q14D04 833 aa17.97■□□□□ 0.47
COL7A1-202ENST00000422991 DENND1BQ6P3S1 775 aa17.97■□□□□ 0.47
COL7A1-202ENST00000422991 TMC5Q6UXY8 1006 aa17.97■□□□□ 0.47
COL7A1-202ENST00000422991 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.97■□□□□ 0.47
COL7A1-202ENST00000422991 ZNF677Q86XU0 584 aa17.97■□□□□ 0.47
COL7A1-202ENST00000422991 STKLD1Q8NE28 680 aa17.97■□□□□ 0.47
COL7A1-202ENST00000422991 UBA3Q8TBC4 463 aa17.97■□□□□ 0.47
COL7A1-202ENST00000422991 FEZF2Q8TBJ5 459 aa17.97■□□□□ 0.47
COL7A1-202ENST00000422991 GPR152Q8TDT2 470 aa17.97■□□□□ 0.47
COL7A1-202ENST00000422991 GIPC2Q8TF65 315 aa17.97■□□□□ 0.47
COL7A1-202ENST00000422991 DNAJC7Q99615 494 aa17.97■□□□□ 0.47
COL7A1-202ENST00000422991 S1PR5Q9H228 398 aa17.97■□□□□ 0.47
COL7A1-202ENST00000422991 PNPLA8Q9NP80 782 aa17.97■□□□□ 0.47
COL7A1-202ENST00000422991 ASB3Q9Y575 518 aa17.97■□□□□ 0.47
COL7A1-202ENST00000422991 OBSL1O75147 1896 aa17.97■□□□□ 0.47
COL7A1-202ENST00000422991 NOTCH4Q99466 2003 aa17.96■□□□□ 0.47
COL7A1-202ENST00000422991 HHLA1C9JL84 531 aa17.96■□□□□ 0.47
COL7A1-202ENST00000422991 XPO1O14980 1071 aaKnown RBP17.96■□□□□ 0.47
COL7A1-202ENST00000422991 CHRNB2P17787 502 aa17.96■□□□□ 0.47
COL7A1-202ENST00000422991 HNRNPH3P31942 346 aaKnown RBP17.96■□□□□ 0.47
COL7A1-202ENST00000422991 MRE11P49959 708 aa17.96■□□□□ 0.47
COL7A1-202ENST00000422991 SLC8A3P57103 927 aa17.96■□□□□ 0.47
COL7A1-202ENST00000422991 CDR2Q01850 454 aa17.96■□□□□ 0.47
COL7A1-202ENST00000422991 GSE1Q14687 1217 aa17.96■□□□□ 0.47
COL7A1-202ENST00000422991 TAF3Q5VWG9 929 aa17.96■□□□□ 0.47
COL7A1-202ENST00000422991 CYP26C1Q6V0L0 522 aa17.96■□□□□ 0.47
COL7A1-202ENST00000422991 ITIH5Q86UX2 942 aa17.96■□□□□ 0.47
COL7A1-202ENST00000422991 ELMOD1Q8N336 334 aa17.96■□□□□ 0.47
COL7A1-202ENST00000422991 SMRP1Q8NCR6 262 aa17.96■□□□□ 0.47
COL7A1-202ENST00000422991 SMG7Q92540 1137 aaKnown RBP17.96■□□□□ 0.47
COL7A1-202ENST00000422991 SECISBP2LQ93073 1101 aaKnown RBP17.96■□□□□ 0.47
COL7A1-202ENST00000422991 PSMG2Q969U7 264 aa17.96■□□□□ 0.47
COL7A1-202ENST00000422991 SYT11Q9BT88 431 aa17.96■□□□□ 0.47
COL7A1-202ENST00000422991 APOL5Q9BWW9 433 aa17.96■□□□□ 0.47
COL7A1-202ENST00000422991 DOCK6Q96HP0 2047 aa17.96■□□□□ 0.47
COL7A1-202ENST00000422991 SLC38A8A6NNN8 435 aa17.95■□□□□ 0.46
COL7A1-202ENST00000422991 TULP2O00295 520 aa17.95■□□□□ 0.46
COL7A1-202ENST00000422991 TNFRSF10BO14763 440 aa17.95■□□□□ 0.46
COL7A1-202ENST00000422991 MMEP08473 750 aa17.95■□□□□ 0.46
COL7A1-202ENST00000422991 KCNA5P22460 613 aa17.95■□□□□ 0.46
COL7A1-202ENST00000422991 GPD2P43304 727 aa17.95■□□□□ 0.46
COL7A1-202ENST00000422991 PLA2G4AP47712 749 aa17.95■□□□□ 0.46
COL7A1-202ENST00000422991 FMO1Q01740 532 aa17.95■□□□□ 0.46
COL7A1-202ENST00000422991 ITIH3Q06033 890 aa17.95■□□□□ 0.46
COL7A1-202ENST00000422991 GOLGA8FQ08AF8 430 aa17.95■□□□□ 0.46
COL7A1-202ENST00000422991 GOLGA8DPQ0D2H9 430 aa17.95■□□□□ 0.46
COL7A1-202ENST00000422991 HGSNATQ68CP4 663 aa17.95■□□□□ 0.46
COL7A1-202ENST00000422991 GPRIN1Q7Z2K8 1008 aa17.95■□□□□ 0.46
COL7A1-202ENST00000422991 GPR149Q86SP6 731 aa17.95■□□□□ 0.46
COL7A1-202ENST00000422991 PASD1Q8IV76 773 aa17.95■□□□□ 0.46
COL7A1-202ENST00000422991 CNGA4Q8IV77 575 aa17.95■□□□□ 0.46
COL7A1-202ENST00000422991 OLIG1Q8TAK6 271 aa17.95■□□□□ 0.46
COL7A1-202ENST00000422991 SLC35F5Q8WV83 523 aa17.95■□□□□ 0.46
COL7A1-202ENST00000422991 UBXN6Q9BZV1 441 aa17.95■□□□□ 0.46
COL7A1-202ENST00000422991 LHX5Q9H2C1 402 aa17.95■□□□□ 0.46
COL7A1-202ENST00000422991 ADAM7Q9H2U9 754 aa17.95■□□□□ 0.46
COL7A1-202ENST00000422991 CD207Q9UJ71 328 aa17.95■□□□□ 0.46
COL7A1-202ENST00000422991 TTC28Q96AY4 2481 aa17.94■□□□□ 0.46
COL7A1-202ENST00000422991 AKR1B15C9JRZ8 316 aaPredicted RBP17.94■□□□□ 0.46
COL7A1-202ENST00000422991 H3BQ06 376 aaPredicted RBP17.94■□□□□ 0.46
COL7A1-202ENST00000422991 CSH1P0DML2 217 aa17.94■□□□□ 0.46
COL7A1-202ENST00000422991 CSH2P0DML3 217 aa17.94■□□□□ 0.46
COL7A1-202ENST00000422991 HMGA1P17096 107 aaKnown RBP17.94■□□□□ 0.46
COL7A1-202ENST00000422991 CDH5P33151 784 aaPredicted RBP17.94■□□□□ 0.46
COL7A1-202ENST00000422991 SLC5A3P53794 718 aa17.94■□□□□ 0.46
COL7A1-202ENST00000422991 ADKP55263 362 aaKnown RBP17.94■□□□□ 0.46
COL7A1-202ENST00000422991 KLHL30Q0D2K2 578 aa17.94■□□□□ 0.46
COL7A1-202ENST00000422991 MTMR3Q13615 1198 aa17.94■□□□□ 0.46
COL7A1-202ENST00000422991 CLUL1Q15846 466 aa17.94■□□□□ 0.46
COL7A1-202ENST00000422991 DENND5BQ6ZUT9 1274 aa17.94■□□□□ 0.46
COL7A1-202ENST00000422991 DNAJB7Q7Z6W7 309 aaPredicted RBP17.94■□□□□ 0.46
COL7A1-202ENST00000422991 PIGZQ86VD9 579 aa17.94■□□□□ 0.46
COL7A1-202ENST00000422991 DRC7Q8IY82 874 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms