RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 LBHD1Q9BQE6 289 aaPredicted RBP16.54■□□□□ 0.24
CDH1-202ENST00000422392 VPS33BQ9H267 617 aa16.54■□□□□ 0.24
CDH1-202ENST00000422392 SLC5A4Q9NY91 659 aa16.54■□□□□ 0.24
CDH1-202ENST00000422392 ZNF112Q9UJU3 913 aa16.54■□□□□ 0.24
CDH1-202ENST00000422392 STRIP2Q9ULQ0 834 aa16.54■□□□□ 0.24
CDH1-202ENST00000422392 C2orf71A6NGG8 1288 aa16.53■□□□□ 0.24
CDH1-202ENST00000422392 PEX11AO75192 247 aa16.53■□□□□ 0.24
CDH1-202ENST00000422392 KRT7P08729 469 aa16.53■□□□□ 0.24
CDH1-202ENST00000422392 ELK3P41970 407 aa16.53■□□□□ 0.24
CDH1-202ENST00000422392 AP3M2P53677 418 aa16.53■□□□□ 0.24
CDH1-202ENST00000422392 HADHQ16836 314 aaKnown RBP16.53■□□□□ 0.24
CDH1-202ENST00000422392 DLK2Q6UY11 383 aa16.53■□□□□ 0.24
CDH1-202ENST00000422392 BANPQ8N9N5 519 aa16.53■□□□□ 0.24
CDH1-202ENST00000422392 TTC8Q8TAM2 541 aa16.53■□□□□ 0.24
CDH1-202ENST00000422392 SPATA18Q8TC71 538 aa16.53■□□□□ 0.24
CDH1-202ENST00000422392 SERAC1Q96JX3 654 aa16.53■□□□□ 0.24
CDH1-202ENST00000422392 ASCC2Q9H1I8 757 aaPredicted RBP16.53■□□□□ 0.24
CDH1-202ENST00000422392 SMYD3Q9H7B4 428 aa16.53■□□□□ 0.24
CDH1-202ENST00000422392 ENTPD5O75356 428 aa16.53■□□□□ 0.24
CDH1-202ENST00000422392 RAD23BP54727 409 aa16.53■□□□□ 0.24
CDH1-202ENST00000422392 YWHAEP62258 255 aaKnown RBP16.53■□□□□ 0.24
CDH1-202ENST00000422392 PARP6Q2NL67 630 aa16.53■□□□□ 0.24
CDH1-202ENST00000422392 TREML2Q5T2D2 321 aa16.53■□□□□ 0.24
CDH1-202ENST00000422392 BZW1Q7L1Q6 419 aaKnown RBP16.53■□□□□ 0.24
CDH1-202ENST00000422392 PDIK1LQ8N165 341 aa16.53■□□□□ 0.24
CDH1-202ENST00000422392 PEBP4Q96S96 227 aa16.53■□□□□ 0.24
CDH1-202ENST00000422392 PPP1R16BQ96T49 567 aa16.53■□□□□ 0.24
CDH1-202ENST00000422392 DHRS4Q9BTZ2 278 aa16.53■□□□□ 0.24
CDH1-202ENST00000422392 INO80B-WBP1J3KQ70 363 aa16.52■□□□□ 0.24
CDH1-202ENST00000422392 NFKBIEO00221 500 aa16.52■□□□□ 0.24
CDH1-202ENST00000422392 FAM155BO75949 473 aa16.52■□□□□ 0.24
CDH1-202ENST00000422392 ARIH2O95376 493 aa16.52■□□□□ 0.24
CDH1-202ENST00000422392 POLR2BP30876 1174 aaKnown RBP16.52■□□□□ 0.24
CDH1-202ENST00000422392 EFNA5P52803 228 aa16.52■□□□□ 0.24
CDH1-202ENST00000422392 DPYSL3Q14195 570 aa16.52■□□□□ 0.24
CDH1-202ENST00000422392 CDO1Q16878 200 aa16.52■□□□□ 0.24
CDH1-202ENST00000422392 HSDL1Q3SXM5 330 aa16.52■□□□□ 0.24
CDH1-202ENST00000422392 KBTBD12Q3ZCT8 623 aa16.52■□□□□ 0.24
CDH1-202ENST00000422392 CLNKQ7Z7G1 428 aa16.52■□□□□ 0.24
CDH1-202ENST00000422392 AGGF1Q8N302 714 aaeCLIP16.52■□□□□ 0.24
CDH1-202ENST00000422392 PIWIL1Q96J94 861 aaKnown RBP16.52■□□□□ 0.24
CDH1-202ENST00000422392 INO80BQ9C086 356 aaPredicted RBP16.52■□□□□ 0.24
CDH1-202ENST00000422392 HOXC10Q9NYD6 342 aa16.52■□□□□ 0.24
CDH1-202ENST00000422392 SIX4Q9UIU6 781 aa16.52■□□□□ 0.24
CDH1-202ENST00000422392 SOWAHBA6NEL2 793 aa16.52■□□□□ 0.23
CDH1-202ENST00000422392 C19orf81C9J6K1 198 aa16.52■□□□□ 0.23
CDH1-202ENST00000422392 KBTBD13C9JR72 458 aa16.52■□□□□ 0.23
CDH1-202ENST00000422392 E7ESA3 106 aa16.52■□□□□ 0.23
CDH1-202ENST00000422392 C2CD2LO14523 706 aa16.52■□□□□ 0.23
CDH1-202ENST00000422392 GRAP2O75791 330 aa16.52■□□□□ 0.23
CDH1-202ENST00000422392 ATP5HO75947 161 aa16.52■□□□□ 0.23
CDH1-202ENST00000422392 NFICP08651 508 aa16.52■□□□□ 0.23
CDH1-202ENST00000422392 PAX7P23759 505 aa16.52■□□□□ 0.23
CDH1-202ENST00000422392 KLHL38Q2WGJ6 581 aa16.52■□□□□ 0.23
CDH1-202ENST00000422392 FYB2Q5VWT5 728 aa16.52■□□□□ 0.23
CDH1-202ENST00000422392 DNERQ8NFT8 737 aa16.52■□□□□ 0.23
CDH1-202ENST00000422392 UBA3Q8TBC4 463 aa16.52■□□□□ 0.23
CDH1-202ENST00000422392 FAM111AQ96PZ2 611 aa16.52■□□□□ 0.23
CDH1-202ENST00000422392 FAM167BQ9BTA0 163 aa16.52■□□□□ 0.23
CDH1-202ENST00000422392 MANSC1Q9H8J5 431 aa16.52■□□□□ 0.23
CDH1-202ENST00000422392 MINDY3Q9H8M7 445 aa16.52■□□□□ 0.23
CDH1-202ENST00000422392 PIM2Q9P1W9 311 aa16.52■□□□□ 0.23
CDH1-202ENST00000422392 BTBD7Q9P203 1132 aa16.52■□□□□ 0.23
CDH1-202ENST00000422392 USP18Q9UMW8 372 aa16.52■□□□□ 0.23
CDH1-202ENST00000422392 CENPFP49454 3210 aa16.52■□□□□ 0.23
CDH1-202ENST00000422392 TCRBV9S1A1TA0A576 114 aa16.51■□□□□ 0.23
CDH1-202ENST00000422392 LPXNO60711 386 aa16.51■□□□□ 0.23
CDH1-202ENST00000422392 TNNC2P02585 160 aa16.51■□□□□ 0.23
CDH1-202ENST00000422392 PTK7Q13308 1070 aa16.51■□□□□ 0.23
CDH1-202ENST00000422392 RASA2Q15283 850 aa16.51■□□□□ 0.23
CDH1-202ENST00000422392 CTC1Q2NKJ3 1217 aa16.51■□□□□ 0.23
CDH1-202ENST00000422392 C15orf59Q2T9L4 293 aaPredicted RBP16.51■□□□□ 0.23
CDH1-202ENST00000422392 FAXCQ5TGI0 409 aa16.51■□□□□ 0.23
CDH1-202ENST00000422392 RFWD3Q6PCD5 774 aa16.51■□□□□ 0.23
CDH1-202ENST00000422392 SLC4A11Q8NBS3 891 aa16.51■□□□□ 0.23
CDH1-202ENST00000422392 INPP5DQ92835 1189 aa16.51■□□□□ 0.23
CDH1-202ENST00000422392 TTC17Q96AE7 1141 aa16.51■□□□□ 0.23
CDH1-202ENST00000422392 ANKRD36BP1Q96IX9 119 aa16.51■□□□□ 0.23
CDH1-202ENST00000422392 MIPEPQ99797 713 aa16.51■□□□□ 0.23
CDH1-202ENST00000422392 DENND2DQ9H6A0 471 aaPredicted RBP16.51■□□□□ 0.23
CDH1-202ENST00000422392 FBXO6Q9NRD1 293 aaPredicted RBP16.51■□□□□ 0.23
CDH1-202ENST00000422392 PPP1R1BQ9UD71 204 aaPredicted RBP16.51■□□□□ 0.23
CDH1-202ENST00000422392 DNAH12Q6ZR08 3092 aa16.51■□□□□ 0.23
CDH1-202ENST00000422392 MYO18AQ92614 2054 aaKnown RBP16.51■□□□□ 0.23
CDH1-202ENST00000422392 CFAP69A5D8W1 941 aa16.51■□□□□ 0.23
CDH1-202ENST00000422392 ZBTB42B2RXF5 422 aa16.51■□□□□ 0.23
CDH1-202ENST00000422392 APOC4-APOC2K7ER74 178 aa16.51■□□□□ 0.23
CDH1-202ENST00000422392 M0QYV0 167 aa16.51■□□□□ 0.23
CDH1-202ENST00000422392 MCF2LO15068 1137 aa16.51■□□□□ 0.23
CDH1-202ENST00000422392 APOC2P02655 101 aa16.51■□□□□ 0.23
CDH1-202ENST00000422392 IQCF3P0C7M6 154 aa16.51■□□□□ 0.23
CDH1-202ENST00000422392 YWHAGP61981 247 aaKnown RBP eCLIP16.51■□□□□ 0.23
CDH1-202ENST00000422392 FAAP100Q0VG06 881 aa16.51■□□□□ 0.23
CDH1-202ENST00000422392 GRM1Q13255 1194 aa16.51■□□□□ 0.23
CDH1-202ENST00000422392 CRYMQ14894 314 aa16.51■□□□□ 0.23
CDH1-202ENST00000422392 SLC45A4Q5BKX6 768 aa16.51■□□□□ 0.23
CDH1-202ENST00000422392 FAM160B1Q5W0V3 765 aa16.51■□□□□ 0.23
CDH1-202ENST00000422392 CDCA2Q69YH5 1023 aaPredicted RBP16.51■□□□□ 0.23
CDH1-202ENST00000422392 DARS2Q6PI48 645 aaKnown RBP16.51■□□□□ 0.23
CDH1-202ENST00000422392 PRPF39Q86UA1 669 aaKnown RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms