RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 GABRQQ9UN88 632 aa9.25□□□□□ -0.93
SNCA-206ENST00000420646 MBLAC1A4D2B0 266 aaPredicted RBP9.24□□□□□ -0.93
SNCA-206ENST00000420646 CLDN5O00501 218 aa9.24□□□□□ -0.93
SNCA-206ENST00000420646 RARBP10826 455 aa9.24□□□□□ -0.93
SNCA-206ENST00000420646 P4HA1P13674 534 aa9.24□□□□□ -0.93
SNCA-206ENST00000420646 LCP1P13796 627 aa9.24□□□□□ -0.93
SNCA-206ENST00000420646 KDELR1P24390 212 aa9.24□□□□□ -0.93
SNCA-206ENST00000420646 ATICP31939 592 aa9.24□□□□□ -0.93
SNCA-206ENST00000420646 PPP2R2AP63151 447 aa9.24□□□□□ -0.93
SNCA-206ENST00000420646 ADAM17P78536 824 aa9.24□□□□□ -0.93
SNCA-206ENST00000420646 MYO1EQ12965 1108 aa9.24□□□□□ -0.93
SNCA-206ENST00000420646 LRRC14Q15048 493 aa9.24□□□□□ -0.93
SNCA-206ENST00000420646 ZBTB6Q15916 424 aa9.24□□□□□ -0.93
SNCA-206ENST00000420646 IFNL1Q8IU54 200 aa9.24□□□□□ -0.93
SNCA-206ENST00000420646 CYP4X1Q8N118 509 aa9.24□□□□□ -0.93
SNCA-206ENST00000420646 MGARPQ8TDB4 240 aa9.24□□□□□ -0.93
SNCA-206ENST00000420646 STRIP2Q9ULQ0 834 aa9.24□□□□□ -0.93
SNCA-206ENST00000420646 CDH23Q9H251 3354 aa9.24□□□□□ -0.93
SNCA-206ENST00000420646 RRN3P2A6NIE6 340 aa9.24□□□□□ -0.93
SNCA-206ENST00000420646 RGS16O15492 202 aaPredicted RBP9.24□□□□□ -0.93
SNCA-206ENST00000420646 HMGCRP04035 888 aa9.24□□□□□ -0.93
SNCA-206ENST00000420646 ITIH2P19823 946 aa9.24□□□□□ -0.93
SNCA-206ENST00000420646 MAN1A1P33908 653 aa9.24□□□□□ -0.93
SNCA-206ENST00000420646 IFNAR2P48551 515 aa9.24□□□□□ -0.93
SNCA-206ENST00000420646 INCA1Q0VD86 236 aa9.24□□□□□ -0.93
SNCA-206ENST00000420646 CA9Q16790 459 aa9.24□□□□□ -0.93
SNCA-206ENST00000420646 PAN2Q504Q3 1202 aaKnown RBP9.24□□□□□ -0.93
SNCA-206ENST00000420646 UBXN11Q5T124 520 aa9.24□□□□□ -0.93
SNCA-206ENST00000420646 RFX6Q8HWS3 928 aa9.24□□□□□ -0.93
SNCA-206ENST00000420646 UNC45BQ8IWX7 931 aa9.24□□□□□ -0.93
SNCA-206ENST00000420646 FAM71DQ8N9W8 422 aa9.24□□□□□ -0.93
SNCA-206ENST00000420646 RBM41Q96IZ5 413 aaKnown RBP9.24□□□□□ -0.93
SNCA-206ENST00000420646 RBM15Q96T37 977 aaKnown RBP eCLIP9.24□□□□□ -0.93
SNCA-206ENST00000420646 AP5M1Q9H0R1 490 aa9.24□□□□□ -0.93
SNCA-206ENST00000420646 VRTNQ9H8Y1 702 aa9.24□□□□□ -0.93
SNCA-206ENST00000420646 WHRNQ9P202 907 aa9.24□□□□□ -0.93
SNCA-206ENST00000420646 IPPQ9Y573 584 aa9.24□□□□□ -0.93
SNCA-206ENST00000420646 CEP290O15078 2479 aa9.24□□□□□ -0.93
SNCA-206ENST00000420646 SYNJ2BP-COX16A0A087WUM0 186 aa9.23□□□□□ -0.93
SNCA-206ENST00000420646 SMIM35A0A1B0GVV1 85 aa9.23□□□□□ -0.93
SNCA-206ENST00000420646 TCRBV7S3A2A0A539 114 aa9.23□□□□□ -0.93
SNCA-206ENST00000420646 RASGRF2O14827 1237 aa9.23□□□□□ -0.93
SNCA-206ENST00000420646 PAPSS1O43252 624 aaPredicted RBP9.23□□□□□ -0.93
SNCA-206ENST00000420646 NUDT17P0C025 328 aa9.23□□□□□ -0.93
SNCA-206ENST00000420646 CDH6P55285 790 aa9.23□□□□□ -0.93
SNCA-206ENST00000420646 QPCTQ16769 361 aa9.23□□□□□ -0.93
SNCA-206ENST00000420646 PPP6R3Q5H9R7 873 aaPredicted RBP9.23□□□□□ -0.93
SNCA-206ENST00000420646 COL13A1Q5TAT6 717 aaPredicted RBP9.23□□□□□ -0.93
SNCA-206ENST00000420646 ANKRD22Q5VYY1 191 aa9.23□□□□□ -0.93
SNCA-206ENST00000420646 C1orf228Q6PIY5 440 aa9.23□□□□□ -0.93
SNCA-206ENST00000420646 LCLAT1Q6UWP7 414 aa9.23□□□□□ -0.93
SNCA-206ENST00000420646 ALKAL1Q6UXT8 129 aa9.23□□□□□ -0.93
SNCA-206ENST00000420646 ANKMY2Q8IV38 441 aa9.23□□□□□ -0.93
SNCA-206ENST00000420646 RNF169Q8NCN4 708 aa9.23□□□□□ -0.93
SNCA-206ENST00000420646 SMG8Q8ND04 991 aaKnown RBP9.23□□□□□ -0.93
SNCA-206ENST00000420646 KBTBD7Q8WVZ9 684 aa9.23□□□□□ -0.93
SNCA-206ENST00000420646 KHSRPQ92945 711 aaKnown RBP eCLIP9.23□□□□□ -0.93
SNCA-206ENST00000420646 SLCO2A1Q92959 643 aa9.23□□□□□ -0.93
SNCA-206ENST00000420646 MCRS1Q96EZ8 462 aa9.23□□□□□ -0.93
SNCA-206ENST00000420646 PAAF1Q9BRP4 392 aa9.23□□□□□ -0.93
SNCA-206ENST00000420646 TRAIPQ9BWF2 469 aa9.23□□□□□ -0.93
SNCA-206ENST00000420646 CYP3A43Q9HB55 503 aa9.23□□□□□ -0.93
SNCA-206ENST00000420646 TMPRSS4Q9NRS4 437 aa9.23□□□□□ -0.93
SNCA-206ENST00000420646 NINJ2Q9NZG7 142 aa9.23□□□□□ -0.93
SNCA-206ENST00000420646 COX16Q9P0S2 106 aa9.23□□□□□ -0.93
SNCA-206ENST00000420646 PURAQ00577 322 aaKnown RBP9.23□□□□□ -0.93
SNCA-206ENST00000420646 AUHQ13825 339 aaKnown RBP9.23□□□□□ -0.93
SNCA-206ENST00000420646 OASLQ15646 514 aaKnown RBP9.23□□□□□ -0.93
SNCA-206ENST00000420646 PTGISQ16647 500 aa9.23□□□□□ -0.93
SNCA-206ENST00000420646 CCDC14Q49A88 953 aa9.23□□□□□ -0.93
SNCA-206ENST00000420646 CYP4V2Q6ZWL3 525 aaPredicted RBP9.23□□□□□ -0.93
SNCA-206ENST00000420646 CCDC89Q8N998 374 aa9.23□□□□□ -0.93
SNCA-206ENST00000420646 SLC2A14Q8TDB8 520 aa9.23□□□□□ -0.93
SNCA-206ENST00000420646 GRK7Q8WTQ7 553 aa9.23□□□□□ -0.93
SNCA-206ENST00000420646 CALCOCO1Q9P1Z2 691 aa9.23□□□□□ -0.93
SNCA-206ENST00000420646 HEY1Q9Y5J3 304 aa9.23□□□□□ -0.93
SNCA-206ENST00000420646 C17orf102A2RUQ5 167 aa9.22□□□□□ -0.93
SNCA-206ENST00000420646 C2CD4BA6NLJ0 364 aa9.22□□□□□ -0.93
SNCA-206ENST00000420646 KPNA7A9QM74 516 aa9.22□□□□□ -0.93
SNCA-206ENST00000420646 F5H423 210 aaPredicted RBP9.22□□□□□ -0.93
SNCA-206ENST00000420646 I3L4J1 428 aa9.22□□□□□ -0.93
SNCA-206ENST00000420646 RNF8O76064 485 aa9.22□□□□□ -0.93
SNCA-206ENST00000420646 BEST1O76090 585 aa9.22□□□□□ -0.93
SNCA-206ENST00000420646 TRUB2O95900 331 aaKnown RBP9.22□□□□□ -0.93
SNCA-206ENST00000420646 CHN1P15882 459 aa9.22□□□□□ -0.93
SNCA-206ENST00000420646 TKTP29401 623 aaKnown RBP9.22□□□□□ -0.93
SNCA-206ENST00000420646 ZNF268Q14587 947 aaPredicted RBP9.22□□□□□ -0.93
SNCA-206ENST00000420646 SLMAPQ14BN4 828 aa9.22□□□□□ -0.93
SNCA-206ENST00000420646 DCAF4L1Q3SXM0 396 aa9.22□□□□□ -0.93
SNCA-206ENST00000420646 FBXO47Q5MNV8 452 aa9.22□□□□□ -0.93
SNCA-206ENST00000420646 RGMBQ6NW40 437 aa9.22□□□□□ -0.93
SNCA-206ENST00000420646 FAM228AQ86W67 206 aa9.22□□□□□ -0.93
SNCA-206ENST00000420646 ALLCQ8N6M5 410 aa9.22□□□□□ -0.93
SNCA-206ENST00000420646 NIPA2Q8N8Q9 360 aa9.22□□□□□ -0.93
SNCA-206ENST00000420646 BEST2Q8NFU1 509 aa9.22□□□□□ -0.93
SNCA-206ENST00000420646 USP6NLQ92738 828 aa9.22□□□□□ -0.93
SNCA-206ENST00000420646 CCT8L2Q96SF2 557 aa9.22□□□□□ -0.93
SNCA-206ENST00000420646 SAYSD1Q9NPB0 183 aa9.22□□□□□ -0.93
SNCA-206ENST00000420646 UNCXA6NJT0 531 aa9.22□□□□□ -0.93
SNCA-206ENST00000420646 TTC4O95801 387 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms