RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 ADGBQ8N7X0 1667 aa3.19□□□□□ -1.9
VPS41-206ENST00000418457 MAST3O60307 1309 aa3.19□□□□□ -1.9
VPS41-206ENST00000418457 ITSN2Q9NZM3 1697 aa3.18□□□□□ -1.9
VPS41-206ENST00000418457 TEX14Q8IWB6 1497 aa3.18□□□□□ -1.9
VPS41-206ENST00000418457 INSRP06213 1382 aa3.18□□□□□ -1.9
VPS41-206ENST00000418457 LOC102723971A0A1B0GUV8 181 aa3.18□□□□□ -1.9
VPS41-206ENST00000418457 GRID2IPA4D2P6 1211 aa3.18□□□□□ -1.9
VPS41-206ENST00000418457 RASA4BC9J798 803 aa3.18□□□□□ -1.9
VPS41-206ENST00000418457 TCERG1O14776 1098 aaKnown RBP3.18□□□□□ -1.9
VPS41-206ENST00000418457 PPM1DO15297 605 aa3.18□□□□□ -1.9
VPS41-206ENST00000418457 CCP110O43303 1012 aa3.18□□□□□ -1.9
VPS41-206ENST00000418457 RASA4O43374 803 aa3.18□□□□□ -1.9
VPS41-206ENST00000418457 INMTO95050 263 aa3.18□□□□□ -1.9
VPS41-206ENST00000418457 FSHBP01225 129 aa3.18□□□□□ -1.9
VPS41-206ENST00000418457 IL1R1P14778 569 aa3.18□□□□□ -1.9
VPS41-206ENST00000418457 ACVR2AP27037 513 aa3.18□□□□□ -1.9
VPS41-206ENST00000418457 IL1R2P27930 398 aa3.18□□□□□ -1.9
VPS41-206ENST00000418457 ACVRL1P37023 503 aa3.18□□□□□ -1.9
VPS41-206ENST00000418457 FOLR3P41439 243 aa3.18□□□□□ -1.9
VPS41-206ENST00000418457 TM4SF4P48230 202 aa3.18□□□□□ -1.9
VPS41-206ENST00000418457 ALDH5A1P51649 535 aaPredicted RBP3.18□□□□□ -1.9
VPS41-206ENST00000418457 HNRNPMP52272 730 aaKnown RBP eCLIP3.18□□□□□ -1.9
VPS41-206ENST00000418457 DGKEP52429 567 aa3.18□□□□□ -1.9
VPS41-206ENST00000418457 PRKAG1P54619 331 aa3.18□□□□□ -1.9
VPS41-206ENST00000418457 MPP3Q13368 585 aa3.18□□□□□ -1.9
VPS41-206ENST00000418457 UBE4AQ14139 1066 aa3.18□□□□□ -1.9
VPS41-206ENST00000418457 ARHGEF7Q14155 803 aa3.18□□□□□ -1.9
VPS41-206ENST00000418457 FHL2Q14192 279 aa3.18□□□□□ -1.9
VPS41-206ENST00000418457 SLC29A2Q14542 456 aa3.18□□□□□ -1.9
VPS41-206ENST00000418457 BRD3Q15059 726 aa3.18□□□□□ -1.9
VPS41-206ENST00000418457 ZIK1Q3SY52 487 aaPredicted RBP3.18□□□□□ -1.9
VPS41-206ENST00000418457 HECTD2Q5U5R9 776 aa3.18□□□□□ -1.9
VPS41-206ENST00000418457 LAIR1Q6GTX8 287 aa3.18□□□□□ -1.9
VPS41-206ENST00000418457 RGS7BPQ6MZT1 257 aaPredicted RBP3.18□□□□□ -1.9
VPS41-206ENST00000418457 RNF44Q7L0R7 432 aa3.18□□□□□ -1.9
VPS41-206ENST00000418457 SLC15A3Q8IY34 581 aa3.18□□□□□ -1.9
VPS41-206ENST00000418457 AMER2Q8N7J2 671 aa3.18□□□□□ -1.9
VPS41-206ENST00000418457 BEND2Q8NDZ0 799 aa3.18□□□□□ -1.9
VPS41-206ENST00000418457 BPIFB1Q8TDL5 484 aa3.18□□□□□ -1.9
VPS41-206ENST00000418457 SMCR8Q8TEV9 937 aaPredicted RBP3.18□□□□□ -1.9
VPS41-206ENST00000418457 LINC00476Q8WZB0 136 aa3.18□□□□□ -1.9
VPS41-206ENST00000418457 ZC3H10Q96K80 434 aaKnown RBP3.18□□□□□ -1.9
VPS41-206ENST00000418457 CCDC138Q96M89 665 aa3.18□□□□□ -1.9
VPS41-206ENST00000418457 KRTAP9-3Q9BYQ3 159 aa3.18□□□□□ -1.9
VPS41-206ENST00000418457 XPNPEP3Q9NQH7 507 aa3.18□□□□□ -1.9
VPS41-206ENST00000418457 STARD7Q9NQZ5 370 aa3.18□□□□□ -1.9
VPS41-206ENST00000418457 CHST12Q9NRB3 414 aa3.18□□□□□ -1.9
VPS41-206ENST00000418457 ZNF212Q9UDV6 495 aa3.18□□□□□ -1.9
VPS41-206ENST00000418457 RGS17Q9UGC6 210 aaPredicted RBP3.18□□□□□ -1.9
VPS41-206ENST00000418457 MID2Q9UJV3 735 aa3.18□□□□□ -1.9
VPS41-206ENST00000418457 PADI4Q9UM07 663 aa3.18□□□□□ -1.9
VPS41-206ENST00000418457 SSX2IPQ9Y2D8 614 aa3.18□□□□□ -1.9
VPS41-206ENST00000418457 TBC1D30Q9Y2I9 924 aa3.18□□□□□ -1.9
VPS41-206ENST00000418457 DNMT1P26358 1616 aaKnown RBP3.18□□□□□ -1.9
VPS41-206ENST00000418457 TOPBP1Q92547 1522 aa3.18□□□□□ -1.9
VPS41-206ENST00000418457 PTPRKQ15262 1439 aa3.18□□□□□ -1.9
VPS41-206ENST00000418457 SPATA31E1Q6ZUB1 1445 aa3.18□□□□□ -1.9
VPS41-206ENST00000418457 POLA1P09884 1462 aaPredicted RBP3.17□□□□□ -1.9
VPS41-206ENST00000418457 CHD1O14646 1710 aa3.17□□□□□ -1.9
VPS41-206ENST00000418457 H7C4K7 107 aa3.17□□□□□ -1.9
VPS41-206ENST00000418457 RAB27BO00194 218 aa3.17□□□□□ -1.9
VPS41-206ENST00000418457 CYR61O00622 381 aa3.17□□□□□ -1.9
VPS41-206ENST00000418457 APOL1O14791 398 aa3.17□□□□□ -1.9
VPS41-206ENST00000418457 FOXN1O15353 648 aa3.17□□□□□ -1.9
VPS41-206ENST00000418457 MPPED1O15442 326 aa3.17□□□□□ -1.9
VPS41-206ENST00000418457 THAP12O43422 761 aa3.17□□□□□ -1.9
VPS41-206ENST00000418457 TLR5O60602 858 aa3.17□□□□□ -1.9
VPS41-206ENST00000418457 RASAL1O95294 804 aa3.17□□□□□ -1.9
VPS41-206ENST00000418457 ESRRBO95718 433 aa3.17□□□□□ -1.9
VPS41-206ENST00000418457 RHOP08100 348 aa3.17□□□□□ -1.9
VPS41-206ENST00000418457 CHRM2P08172 466 aa3.17□□□□□ -1.9
VPS41-206ENST00000418457 TSHRP16473 764 aa3.17□□□□□ -1.9
VPS41-206ENST00000418457 KCNA3P22001 575 aa3.17□□□□□ -1.9
VPS41-206ENST00000418457 TNFSF4P23510 183 aa3.17□□□□□ -1.9
VPS41-206ENST00000418457 MPLP40238 635 aa3.17□□□□□ -1.9
VPS41-206ENST00000418457 CPT1AP50416 773 aa3.17□□□□□ -1.9
VPS41-206ENST00000418457 PDE6CP51160 858 aa3.17□□□□□ -1.9
VPS41-206ENST00000418457 SEC24CP53992 1094 aa3.17□□□□□ -1.9
VPS41-206ENST00000418457 MRPS35P82673 323 aaKnown RBP3.17□□□□□ -1.9
VPS41-206ENST00000418457 HTRA4P83105 476 aaPredicted RBP3.17□□□□□ -1.9
VPS41-206ENST00000418457 FOXI1Q12951 378 aa3.17□□□□□ -1.9
VPS41-206ENST00000418457 KLF10Q13118 480 aa3.17□□□□□ -1.9
VPS41-206ENST00000418457 EIF2B5Q13144 721 aaKnown RBP3.17□□□□□ -1.9
VPS41-206ENST00000418457 PTPRRQ15256 657 aa3.17□□□□□ -1.9
VPS41-206ENST00000418457 NBPF8Q3BBV2 869 aa3.17□□□□□ -1.9
VPS41-206ENST00000418457 TEDDM1Q5T9Z0 273 aa3.17□□□□□ -1.9
VPS41-206ENST00000418457 KLHDC7AQ5VTJ3 777 aa3.17□□□□□ -1.9
VPS41-206ENST00000418457 CACHD1Q5VU97 1274 aa3.17□□□□□ -1.9
VPS41-206ENST00000418457 Q6ZPA2 131 aa3.17□□□□□ -1.9
VPS41-206ENST00000418457 SRLQ86TD4 932 aa3.17□□□□□ -1.9
VPS41-206ENST00000418457 DTX2Q86UW9 622 aa3.17□□□□□ -1.9
VPS41-206ENST00000418457 FAM186BQ8IYM0 893 aa3.17□□□□□ -1.9
VPS41-206ENST00000418457 SPARTQ8N0X7 666 aa3.17□□□□□ -1.9
VPS41-206ENST00000418457 RNF152Q8N8N0 203 aa3.17□□□□□ -1.9
VPS41-206ENST00000418457 ATP11CQ8NB49 1132 aa3.17□□□□□ -1.9
VPS41-206ENST00000418457 ACTRT2Q8TDY3 377 aa3.17□□□□□ -1.9
VPS41-206ENST00000418457 TFAP2BQ92481 460 aa3.17□□□□□ -1.9
VPS41-206ENST00000418457 GJA10Q969M2 543 aa3.17□□□□□ -1.9
VPS41-206ENST00000418457 PPP2R3CQ969Q6 453 aa3.17□□□□□ -1.9
VPS41-206ENST00000418457 FKBP10Q96AY3 582 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms