RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 MYO3AQ8NEV4 1616 aa11.62□□□□□ -0.55
PTCH1-205ENST00000418258 ATP6V1C1P21283 382 aa11.62□□□□□ -0.55
PTCH1-205ENST00000418258 TRIM28Q13263 835 aaKnown RBP11.62□□□□□ -0.55
PTCH1-205ENST00000418258 ZNF34Q8IZ26 560 aa11.62□□□□□ -0.55
PTCH1-205ENST00000418258 DTX3LQ8TDB6 740 aa11.62□□□□□ -0.55
PTCH1-205ENST00000418258 CSGALNACT1Q8TDX6 532 aa11.62□□□□□ -0.55
PTCH1-205ENST00000418258 ADAM21Q9UKJ8 722 aa11.62□□□□□ -0.55
PTCH1-205ENST00000418258 EIF3LQ9Y262 564 aaKnown RBP11.62□□□□□ -0.55
PTCH1-205ENST00000418258 C16orf96A6NNT2 1141 aa11.62□□□□□ -0.55
PTCH1-205ENST00000418258 FGFR2P21802 821 aa11.62□□□□□ -0.55
PTCH1-205ENST00000418258 COMTP21964 271 aa11.62□□□□□ -0.55
PTCH1-205ENST00000418258 RPA1P27694 616 aa11.62□□□□□ -0.55
PTCH1-205ENST00000418258 CLCN3P51790 818 aa11.62□□□□□ -0.55
PTCH1-205ENST00000418258 MRPS15P82914 257 aaKnown RBP11.62□□□□□ -0.55
PTCH1-205ENST00000418258 RUNX1T1Q06455 604 aa11.62□□□□□ -0.55
PTCH1-205ENST00000418258 SLC15A2Q16348 729 aa11.62□□□□□ -0.55
PTCH1-205ENST00000418258 SLFN11Q7Z7L1 901 aa11.62□□□□□ -0.55
PTCH1-205ENST00000418258 PRPF39Q86UA1 669 aaKnown RBP11.62□□□□□ -0.55
PTCH1-205ENST00000418258 CCDC33Q8N5R6 958 aa11.62□□□□□ -0.55
PTCH1-205ENST00000418258 C9orf72Q96LT7 481 aa11.62□□□□□ -0.55
PTCH1-205ENST00000418258 LRRC1Q9BTT6 524 aa11.62□□□□□ -0.55
PTCH1-205ENST00000418258 MRGBPQ9NV56 204 aa11.62□□□□□ -0.55
PTCH1-205ENST00000418258 SNRPAP09012 282 aaKnown RBP11.62□□□□□ -0.55
PTCH1-205ENST00000418258 EFL1Q7Z2Z2 1120 aaKnown RBP11.62□□□□□ -0.55
PTCH1-205ENST00000418258 SPATA21Q7Z572 469 aa11.62□□□□□ -0.55
PTCH1-205ENST00000418258 GPRASP2Q96D09 838 aa11.62□□□□□ -0.55
PTCH1-205ENST00000418258 CDK5RAP1Q96SZ6 601 aaKnown RBP11.62□□□□□ -0.55
PTCH1-205ENST00000418258 BLOC1S6Q9UL45 172 aa11.62□□□□□ -0.55
PTCH1-205ENST00000418258 SNX12Q9UMY4 172 aa11.62□□□□□ -0.55
PTCH1-205ENST00000418258 CAB39Q9Y376 341 aaPredicted RBP11.62□□□□□ -0.55
PTCH1-205ENST00000418258 TBKBP1A7MCY6 615 aa11.62□□□□□ -0.55
PTCH1-205ENST00000418258 CDH16O75309 829 aa11.62□□□□□ -0.55
PTCH1-205ENST00000418258 TOMM70O94826 608 aa11.62□□□□□ -0.55
PTCH1-205ENST00000418258 MTF1Q14872 753 aa11.62□□□□□ -0.55
PTCH1-205ENST00000418258 METTL16Q86W50 562 aaKnown RBP11.62□□□□□ -0.55
PTCH1-205ENST00000418258 UTP6Q9NYH9 597 aaKnown RBP11.62□□□□□ -0.55
PTCH1-205ENST00000418258 FAM205CA6NFA0 338 aa11.62□□□□□ -0.55
PTCH1-205ENST00000418258 CFAP73A6NFT4 308 aa11.62□□□□□ -0.55
PTCH1-205ENST00000418258 OXCT1P55809 520 aa11.62□□□□□ -0.55
PTCH1-205ENST00000418258 GUCY1A3Q02108 690 aa11.62□□□□□ -0.55
PTCH1-205ENST00000418258 PLD1Q13393 1074 aa11.62□□□□□ -0.55
PTCH1-205ENST00000418258 STARD3Q14849 445 aa11.62□□□□□ -0.55
PTCH1-205ENST00000418258 NAB2Q15742 525 aa11.62□□□□□ -0.55
PTCH1-205ENST00000418258 RDM1Q8NG50 284 aa11.62□□□□□ -0.55
PTCH1-205ENST00000418258 FAR2Q96K12 515 aa11.62□□□□□ -0.55
PTCH1-205ENST00000418258 C17orf75Q9HAS0 396 aa11.62□□□□□ -0.55
PTCH1-205ENST00000418258 SCN3BQ9NY72 215 aa11.62□□□□□ -0.55
PTCH1-205ENST00000418258 MIER2Q8N344 545 aa11.62□□□□□ -0.55
PTCH1-205ENST00000418258 GALNT4Q8N4A0 578 aa11.62□□□□□ -0.55
PTCH1-205ENST00000418258 ZNF609O15014 1411 aa11.61□□□□□ -0.55
PTCH1-205ENST00000418258 KPNA6O60684 536 aa11.61□□□□□ -0.55
PTCH1-205ENST00000418258 SPAG6O75602 509 aa11.61□□□□□ -0.55
PTCH1-205ENST00000418258 MAP3K6O95382 1288 aa11.61□□□□□ -0.55
PTCH1-205ENST00000418258 RHOCP08134 193 aa11.61□□□□□ -0.55
PTCH1-205ENST00000418258 RBP3P10745 1247 aa11.61□□□□□ -0.55
PTCH1-205ENST00000418258 NAMPTP43490 491 aa11.61□□□□□ -0.55
PTCH1-205ENST00000418258 CYP51A1Q16850 503 aa11.61□□□□□ -0.55
PTCH1-205ENST00000418258 ERLEC1Q96DZ1 483 aa11.61□□□□□ -0.55
PTCH1-205ENST00000418258 PDGFCQ9NRA1 345 aa11.61□□□□□ -0.55
PTCH1-205ENST00000418258 GNG14A0A1W2PPG7 69 aa11.61□□□□□ -0.55
PTCH1-205ENST00000418258 CBX4O00257 560 aa11.61□□□□□ -0.55
PTCH1-205ENST00000418258 KLHL2O95198 593 aa11.61□□□□□ -0.55
PTCH1-205ENST00000418258 FDFT1P37268 417 aa11.61□□□□□ -0.55
PTCH1-205ENST00000418258 CAP2P40123 477 aa11.61□□□□□ -0.55
PTCH1-205ENST00000418258 LHX1P48742 406 aa11.61□□□□□ -0.55
PTCH1-205ENST00000418258 SKA1Q96BD8 255 aa11.61□□□□□ -0.55
PTCH1-205ENST00000418258 CYFIP2Q96F07 1278 aa11.61□□□□□ -0.55
PTCH1-205ENST00000418258 FAM167BQ9BTA0 163 aa11.61□□□□□ -0.55
PTCH1-205ENST00000418258 ASCC2Q9H1I8 757 aaPredicted RBP11.61□□□□□ -0.55
PTCH1-205ENST00000418258 RANBP17Q9H2T7 1088 aaKnown RBP11.61□□□□□ -0.55
PTCH1-205ENST00000418258 PAPOLBQ9NRJ5 636 aaKnown RBP11.61□□□□□ -0.55
PTCH1-205ENST00000418258 GEMIN8Q9NWZ8 242 aaKnown RBP11.61□□□□□ -0.55
PTCH1-205ENST00000418258 RUVBL2Q9Y230 463 aaKnown RBP11.61□□□□□ -0.55
PTCH1-205ENST00000418258 GSTM1P09488 218 aa11.61□□□□□ -0.55
PTCH1-205ENST00000418258 RAP1GAPP47736 663 aa11.61□□□□□ -0.55
PTCH1-205ENST00000418258 HIRAP54198 1017 aaPredicted RBP11.61□□□□□ -0.55
PTCH1-205ENST00000418258 PLOD1Q02809 727 aaPredicted RBP11.61□□□□□ -0.55
PTCH1-205ENST00000418258 RBBP8Q99708 897 aa11.61□□□□□ -0.55
PTCH1-205ENST00000418258 EXOSC4Q9NPD3 245 aaKnown RBP11.61□□□□□ -0.55
PTCH1-205ENST00000418258 SLC12A8A0AV02 714 aa11.61□□□□□ -0.55
PTCH1-205ENST00000418258 MGAT4DA6NG13 374 aa11.61□□□□□ -0.55
PTCH1-205ENST00000418258 POMCP01189 267 aa11.61□□□□□ -0.55
PTCH1-205ENST00000418258 SRGNP10124 158 aa11.61□□□□□ -0.55
PTCH1-205ENST00000418258 GTF2E2P29084 291 aaKnown RBP11.61□□□□□ -0.55
PTCH1-205ENST00000418258 CTCFP49711 727 aaPredicted RBP11.61□□□□□ -0.55
PTCH1-205ENST00000418258 TGM3Q08188 693 aa11.61□□□□□ -0.55
PTCH1-205ENST00000418258 CSTF3Q12996 717 aaKnown RBP11.61□□□□□ -0.55
PTCH1-205ENST00000418258 VN1R5Q7Z5H4 357 aa11.61□□□□□ -0.55
PTCH1-205ENST00000418258 SLC16A10Q8TF71 515 aa11.61□□□□□ -0.55
PTCH1-205ENST00000418258 OLFM3Q96PB7 478 aa11.61□□□□□ -0.55
PTCH1-205ENST00000418258 OSBPL1AQ9BXW6 950 aa11.61□□□□□ -0.55
PTCH1-205ENST00000418258 PALMDQ9NP74 551 aa11.61□□□□□ -0.55
PTCH1-205ENST00000418258 RPLP2P05387 115 aaKnown RBP11.61□□□□□ -0.55
PTCH1-205ENST00000418258 CHN1P15882 459 aa11.61□□□□□ -0.55
PTCH1-205ENST00000418258 TNNI3P19429 210 aa11.61□□□□□ -0.55
PTCH1-205ENST00000418258 KLK7P49862 253 aa11.61□□□□□ -0.55
PTCH1-205ENST00000418258 RPS7P62081 194 aaKnown RBP11.61□□□□□ -0.55
PTCH1-205ENST00000418258 CHI3L2Q15782 390 aa11.61□□□□□ -0.55
PTCH1-205ENST00000418258 PPIL6Q8IXY8 311 aa11.61□□□□□ -0.55
PTCH1-205ENST00000418258 CAMKK1Q8N5S9 505 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms