RNA–Protein interactions for RNA: ENST00000417043.5

RHBDF1-202, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 3

Gene RHBDF1, Length 816 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-202ENST00000417043 GDF9O60383 454 aa16.65■□□□□ 0.26
RHBDF1-202ENST00000417043 ZSCAN22P10073 491 aaPredicted RBP16.65■□□□□ 0.26
RHBDF1-202ENST00000417043 HOXA6P31267 233 aa16.65■□□□□ 0.26
RHBDF1-202ENST00000417043 ME1P48163 572 aa16.65■□□□□ 0.26
RHBDF1-202ENST00000417043 IFNAR2P48551 515 aa16.65■□□□□ 0.26
RHBDF1-202ENST00000417043 MYL6P60660 151 aa16.65■□□□□ 0.26
RHBDF1-202ENST00000417043 USP4Q13107 963 aa16.65■□□□□ 0.26
RHBDF1-202ENST00000417043 KCNB1Q14721 858 aa16.65■□□□□ 0.26
RHBDF1-202ENST00000417043 CCDC6Q16204 474 aa16.65■□□□□ 0.26
RHBDF1-202ENST00000417043 WDR72Q3MJ13 1102 aa16.65■□□□□ 0.26
RHBDF1-202ENST00000417043 VSTM1Q6UX27 236 aa16.65■□□□□ 0.26
RHBDF1-202ENST00000417043 DENND5BQ6ZUT9 1274 aa16.65■□□□□ 0.26
RHBDF1-202ENST00000417043 CPA6Q8N4T0 437 aa16.65■□□□□ 0.26
RHBDF1-202ENST00000417043 FSIP1Q8NA03 581 aa16.65■□□□□ 0.26
RHBDF1-202ENST00000417043 PLEKHO2Q8TD55 490 aa16.65■□□□□ 0.26
RHBDF1-202ENST00000417043 SNX21Q969T3 373 aa16.65■□□□□ 0.26
RHBDF1-202ENST00000417043 SPATA17Q96L03 361 aa16.65■□□□□ 0.26
RHBDF1-202ENST00000417043 TMEM30AQ9NV96 361 aa16.65■□□□□ 0.26
RHBDF1-202ENST00000417043 NXF1Q9UBU9 619 aaKnown RBP16.65■□□□□ 0.26
RHBDF1-202ENST00000417043 SLC8A2Q9UPR5 921 aa16.65■□□□□ 0.26
RHBDF1-202ENST00000417043 LAMA1P25391 3075 aa16.64■□□□□ 0.25
RHBDF1-202ENST00000417043 F8VP50 259 aa16.64■□□□□ 0.25
RHBDF1-202ENST00000417043 CLDN5O00501 218 aa16.64■□□□□ 0.25
RHBDF1-202ENST00000417043 SCAMP3O14828 347 aaKnown RBP16.64■□□□□ 0.25
RHBDF1-202ENST00000417043 ATG13O75143 517 aa16.64■□□□□ 0.25
RHBDF1-202ENST00000417043 F13A1P00488 732 aa16.64■□□□□ 0.25
RHBDF1-202ENST00000417043 PTPN1P18031 435 aaKnown RBP16.64■□□□□ 0.25
RHBDF1-202ENST00000417043 ANXA13P27216 316 aa16.64■□□□□ 0.25
RHBDF1-202ENST00000417043 AMPD2Q01433 879 aa16.64■□□□□ 0.25
RHBDF1-202ENST00000417043 PSMD2Q13200 908 aa16.64■□□□□ 0.25
RHBDF1-202ENST00000417043 PRR23CQ6ZRP0 262 aa16.64■□□□□ 0.25
RHBDF1-202ENST00000417043 KBTBD6Q86V97 674 aa16.64■□□□□ 0.25
RHBDF1-202ENST00000417043 RPLP0P6Q8NHW5 317 aa16.64■□□□□ 0.25
RHBDF1-202ENST00000417043 HHIPQ96QV1 700 aa16.64■□□□□ 0.25
RHBDF1-202ENST00000417043 RNF38Q9H0F5 515 aa16.64■□□□□ 0.25
RHBDF1-202ENST00000417043 TACC1O75410 805 aa16.63■□□□□ 0.25
RHBDF1-202ENST00000417043 RPP40O75818 363 aaKnown RBP16.63■□□□□ 0.25
RHBDF1-202ENST00000417043 ABL1P00519 1130 aa16.63■□□□□ 0.25
RHBDF1-202ENST00000417043 DRD1P21728 446 aa16.63■□□□□ 0.25
RHBDF1-202ENST00000417043 SDHBP21912 280 aa16.63■□□□□ 0.25
RHBDF1-202ENST00000417043 CDH8P55286 799 aa16.63■□□□□ 0.25
RHBDF1-202ENST00000417043 IFRD2Q12894 506 aaPredicted RBP16.63■□□□□ 0.25
RHBDF1-202ENST00000417043 TRPC3Q13507 836 aa16.63■□□□□ 0.25
RHBDF1-202ENST00000417043 MAPRE1Q15691 268 aaKnown RBP16.63■□□□□ 0.25
RHBDF1-202ENST00000417043 CSRP2Q16527 193 aa16.63■□□□□ 0.25
RHBDF1-202ENST00000417043 KNOP1Q1ED39 458 aaKnown RBP16.63■□□□□ 0.25
RHBDF1-202ENST00000417043 RESP18Q5W5W9 173 aa16.63■□□□□ 0.25
RHBDF1-202ENST00000417043 CD101Q93033 1021 aa16.63■□□□□ 0.25
RHBDF1-202ENST00000417043 ATP2A3Q93084 1043 aa16.63■□□□□ 0.25
RHBDF1-202ENST00000417043 RTKNQ9BST9 563 aa16.63■□□□□ 0.25
RHBDF1-202ENST00000417043 B3GNT5Q9BYG0 378 aa16.63■□□□□ 0.25
RHBDF1-202ENST00000417043 ZNF518BQ9C0D4 1074 aa16.63■□□□□ 0.25
RHBDF1-202ENST00000417043 XYLT2Q9H1B5 865 aa16.63■□□□□ 0.25
RHBDF1-202ENST00000417043 ARRDC1-AS1Q9H2J1 176 aa16.63■□□□□ 0.25
RHBDF1-202ENST00000417043 FAM13BQ9NYF5 915 aa16.63■□□□□ 0.25
RHBDF1-202ENST00000417043 TRPM5Q9NZQ8 1165 aa16.63■□□□□ 0.25
RHBDF1-202ENST00000417043 SERTAD1Q9UHV2 236 aa16.63■□□□□ 0.25
RHBDF1-202ENST00000417043 ARHGAP26Q9UNA1 814 aa16.63■□□□□ 0.25
RHBDF1-202ENST00000417043 TPRP12270 2363 aaKnown RBP16.62■□□□□ 0.25
RHBDF1-202ENST00000417043 KIAA1549LQ6ZVL6 1849 aa16.62■□□□□ 0.25
RHBDF1-202ENST00000417043 PVALEFA0A1B0GWK0 134 aa16.62■□□□□ 0.25
RHBDF1-202ENST00000417043 ZNF840PA6NDX5 716 aa16.62■□□□□ 0.25
RHBDF1-202ENST00000417043 LEFTY2O00292 366 aa16.62■□□□□ 0.25
RHBDF1-202ENST00000417043 EXOC3O60645 756 aa16.62■□□□□ 0.25
RHBDF1-202ENST00000417043 LRP3O75074 770 aa16.62■□□□□ 0.25
RHBDF1-202ENST00000417043 PHACTR2O75167 634 aa16.62■□□□□ 0.25
RHBDF1-202ENST00000417043 RAP1GAPP47736 663 aa16.62■□□□□ 0.25
RHBDF1-202ENST00000417043 TNNC1P63316 161 aa16.62■□□□□ 0.25
RHBDF1-202ENST00000417043 DNM1Q05193 864 aaKnown RBP16.62■□□□□ 0.25
RHBDF1-202ENST00000417043 TAF10Q12962 218 aa16.62■□□□□ 0.25
RHBDF1-202ENST00000417043 STK4Q13043 487 aa16.62■□□□□ 0.25
RHBDF1-202ENST00000417043 BMT2Q1RMZ1 405 aa16.62■□□□□ 0.25
RHBDF1-202ENST00000417043 ABCA7Q8IZY2 2146 aa16.62■□□□□ 0.25
RHBDF1-202ENST00000417043 GAB3Q8WWW8 586 aa16.62■□□□□ 0.25
RHBDF1-202ENST00000417043 CHAMP1Q96JM3 812 aa16.62■□□□□ 0.25
RHBDF1-202ENST00000417043 C8orf48Q96LL4 319 aa16.62■□□□□ 0.25
RHBDF1-202ENST00000417043 TTLL2Q9BWV7 592 aa16.62■□□□□ 0.25
RHBDF1-202ENST00000417043 SMYD3Q9H7B4 428 aa16.62■□□□□ 0.25
RHBDF1-202ENST00000417043 MAGEF1Q9HAY2 307 aa16.62■□□□□ 0.25
RHBDF1-202ENST00000417043 SMPD4Q9NXE4 827 aa16.62■□□□□ 0.25
RHBDF1-202ENST00000417043 UBE4BO95155 1302 aa16.62■□□□□ 0.25
RHBDF1-202ENST00000417043 MYH10P35580 1976 aa16.61■□□□□ 0.25
RHBDF1-202ENST00000417043 A8MXQ7 604 aa16.61■□□□□ 0.25
RHBDF1-202ENST00000417043 TRIM66O15016 1216 aa16.61■□□□□ 0.25
RHBDF1-202ENST00000417043 KLRC4O43908 158 aa16.61■□□□□ 0.25
RHBDF1-202ENST00000417043 HSP90AA1P07900 732 aaKnown RBP16.61■□□□□ 0.25
RHBDF1-202ENST00000417043 CCDC192P0DO97 292 aa16.61■□□□□ 0.25
RHBDF1-202ENST00000417043 SNRPFP62306 86 aaKnown RBP16.61■□□□□ 0.25
RHBDF1-202ENST00000417043 NOP14P78316 857 aaKnown RBP16.61■□□□□ 0.25
RHBDF1-202ENST00000417043 SF3A2Q15428 464 aaKnown RBP16.61■□□□□ 0.25
RHBDF1-202ENST00000417043 GAB4Q2WGN9 574 aa16.61■□□□□ 0.25
RHBDF1-202ENST00000417043 TDRD10Q5VZ19 366 aaKnown RBP16.61■□□□□ 0.25
RHBDF1-202ENST00000417043 HSCBQ8IWL3 235 aa16.61■□□□□ 0.25
RHBDF1-202ENST00000417043 C12orf56Q8IXR9 622 aa16.61■□□□□ 0.25
RHBDF1-202ENST00000417043 PAGE5Q96GU1 130 aa16.61■□□□□ 0.25
RHBDF1-202ENST00000417043 KCNK16Q96T55 309 aa16.61■□□□□ 0.25
RHBDF1-202ENST00000417043 SDCBP2Q9H190 292 aa16.61■□□□□ 0.25
RHBDF1-202ENST00000417043 SMOC1Q9H4F8 434 aa16.61■□□□□ 0.25
RHBDF1-202ENST00000417043 RXFP3Q9NSD7 469 aa16.61■□□□□ 0.25
RHBDF1-202ENST00000417043 CNOT1A5YKK6 2376 aaKnown RBP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms