RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 FAM167AQ96KS9 214 aa13.39□□□□□ -0.27
SCN1B-202ENST00000415950 TBC1D23Q9NUY8 699 aa13.39□□□□□ -0.27
SCN1B-202ENST00000415950 PCDHAC2Q9Y5I4 1007 aa13.39□□□□□ -0.27
SCN1B-202ENST00000415950 ARHGAP23Q9P227 1491 aa13.39□□□□□ -0.27
SCN1B-202ENST00000415950 A0A1W2PPM1 405 aa13.39□□□□□ -0.27
SCN1B-202ENST00000415950 PROSCO94903 275 aa13.39□□□□□ -0.27
SCN1B-202ENST00000415950 SREBF1P36956 1147 aa13.39□□□□□ -0.27
SCN1B-202ENST00000415950 LRRC74AQ0VAA2 488 aa13.39□□□□□ -0.27
SCN1B-202ENST00000415950 CYLC2Q14093 348 aaPredicted RBP13.39□□□□□ -0.27
SCN1B-202ENST00000415950 MAPRE2Q15555 327 aa13.39□□□□□ -0.27
SCN1B-202ENST00000415950 PCSK7Q16549 785 aa13.39□□□□□ -0.27
SCN1B-202ENST00000415950 MICU2Q8IYU8 434 aa13.39□□□□□ -0.27
SCN1B-202ENST00000415950 PTPRN2Q92932 1015 aa13.39□□□□□ -0.27
SCN1B-202ENST00000415950 SHISA4Q96DD7 197 aa13.39□□□□□ -0.27
SCN1B-202ENST00000415950 ASIC4Q96FT7 647 aa13.39□□□□□ -0.27
SCN1B-202ENST00000415950 KCNQ5Q9NR82 932 aa13.39□□□□□ -0.27
SCN1B-202ENST00000415950 DNAJC16Q9Y2G8 782 aa13.39□□□□□ -0.27
SCN1B-202ENST00000415950 PCDHA3Q9Y5H8 950 aa13.39□□□□□ -0.27
SCN1B-202ENST00000415950 C3orf70A6NLC5 250 aaPredicted RBP13.39□□□□□ -0.27
SCN1B-202ENST00000415950 MYO1GB0I1T2 1018 aa13.39□□□□□ -0.27
SCN1B-202ENST00000415950 UNC5CO95185 931 aa13.39□□□□□ -0.27
SCN1B-202ENST00000415950 CCDC159P0C7I6 412 aa13.39□□□□□ -0.27
SCN1B-202ENST00000415950 ABCG1P45844 678 aa13.39□□□□□ -0.27
SCN1B-202ENST00000415950 CCNHP51946 323 aaPredicted RBP13.39□□□□□ -0.27
SCN1B-202ENST00000415950 TPI1P60174 286 aa13.39□□□□□ -0.27
SCN1B-202ENST00000415950 CENPCQ03188 943 aa13.39□□□□□ -0.27
SCN1B-202ENST00000415950 AMHR2Q16671 573 aa13.39□□□□□ -0.27
SCN1B-202ENST00000415950 GANCQ8TET4 914 aa13.39□□□□□ -0.27
SCN1B-202ENST00000415950 ZNF669Q96BR6 464 aaPredicted RBP13.39□□□□□ -0.27
SCN1B-202ENST00000415950 PABPC5Q96DU9 382 aaKnown RBP13.39□□□□□ -0.27
SCN1B-202ENST00000415950 CMTM5Q96DZ9 223 aa13.39□□□□□ -0.27
SCN1B-202ENST00000415950 HES6Q96HZ4 224 aa13.39□□□□□ -0.27
SCN1B-202ENST00000415950 PRMT6Q96LA8 375 aaPredicted RBP13.39□□□□□ -0.27
SCN1B-202ENST00000415950 UBXN6Q9BZV1 441 aa13.39□□□□□ -0.27
SCN1B-202ENST00000415950 MTMR12Q9C0I1 747 aa13.39□□□□□ -0.27
SCN1B-202ENST00000415950 TEKT2Q9UIF3 430 aa13.39□□□□□ -0.27
SCN1B-202ENST00000415950 SLC39A10Q9ULF5 831 aa13.39□□□□□ -0.27
SCN1B-202ENST00000415950 TSC22D4Q9Y3Q8 395 aa13.39□□□□□ -0.27
SCN1B-202ENST00000415950 LINC00854A0A1B0GVQ3 168 aa13.38□□□□□ -0.27
SCN1B-202ENST00000415950 ANKRD63C9JTQ0 380 aa13.38□□□□□ -0.27
SCN1B-202ENST00000415950 ZMPSTE24O75844 475 aa13.38□□□□□ -0.27
SCN1B-202ENST00000415950 DGAT1O75907 488 aa13.38□□□□□ -0.27
SCN1B-202ENST00000415950 ACADSP16219 412 aa13.38□□□□□ -0.27
SCN1B-202ENST00000415950 KCNA4P22459 653 aa13.38□□□□□ -0.27
SCN1B-202ENST00000415950 TNFAIP2Q03169 654 aa13.38□□□□□ -0.27
SCN1B-202ENST00000415950 INPP5AQ14642 412 aa13.38□□□□□ -0.27
SCN1B-202ENST00000415950 C16orf46Q6P387 395 aa13.38□□□□□ -0.27
SCN1B-202ENST00000415950 MTHFD1LQ6UB35 978 aa13.38□□□□□ -0.27
SCN1B-202ENST00000415950 LZICQ8WZA0 190 aa13.38□□□□□ -0.27
SCN1B-202ENST00000415950 ZBTB45Q96K62 511 aaPredicted RBP13.38□□□□□ -0.27
SCN1B-202ENST00000415950 FHDC1Q9C0D6 1143 aaPredicted RBP13.38□□□□□ -0.27
SCN1B-202ENST00000415950 FAM237BA0A1B0GVD1 139 aa13.38□□□□□ -0.27
SCN1B-202ENST00000415950 M0R3G1 203 aa13.38□□□□□ -0.27
SCN1B-202ENST00000415950 PEX1O43933 1283 aa13.38□□□□□ -0.27
SCN1B-202ENST00000415950 MYL3P08590 195 aa13.38□□□□□ -0.27
SCN1B-202ENST00000415950 IFNA8P32881 189 aa13.38□□□□□ -0.27
SCN1B-202ENST00000415950 DSG1Q02413 1049 aa13.38□□□□□ -0.27
SCN1B-202ENST00000415950 CUL2Q13617 745 aa13.38□□□□□ -0.27
SCN1B-202ENST00000415950 CES3Q6UWW8 571 aa13.38□□□□□ -0.27
SCN1B-202ENST00000415950 MCOLN2Q8IZK6 566 aa13.38□□□□□ -0.27
SCN1B-202ENST00000415950 CATSPER1Q8NEC5 780 aa13.38□□□□□ -0.27
SCN1B-202ENST00000415950 ATXN2LQ8WWM7 1075 aaKnown RBP13.38□□□□□ -0.27
SCN1B-202ENST00000415950 SPATA33Q96N06 139 aa13.38□□□□□ -0.27
SCN1B-202ENST00000415950 PRPF18Q99633 342 aaKnown RBP13.38□□□□□ -0.27
SCN1B-202ENST00000415950 OLFML3Q9NRN5 406 aa13.38□□□□□ -0.27
SCN1B-202ENST00000415950 ATP8B3O60423 1300 aa13.38□□□□□ -0.27
SCN1B-202ENST00000415950 KLHL2O95198 593 aa13.38□□□□□ -0.27
SCN1B-202ENST00000415950 FAAP100Q0VG06 881 aa13.38□□□□□ -0.27
SCN1B-202ENST00000415950 PIGHQ14442 188 aaPredicted RBP13.38□□□□□ -0.27
SCN1B-202ENST00000415950 CCNG2Q16589 344 aa13.38□□□□□ -0.27
SCN1B-202ENST00000415950 ARMC3Q5W041 872 aa13.38□□□□□ -0.27
SCN1B-202ENST00000415950 SEPT12Q8IYM1 358 aa13.38□□□□□ -0.27
SCN1B-202ENST00000415950 USP13Q92995 863 aaPredicted RBP13.38□□□□□ -0.27
SCN1B-202ENST00000415950 MASTLQ96GX5 879 aa13.38□□□□□ -0.27
SCN1B-202ENST00000415950 KCTD10Q9H3F6 313 aa13.38□□□□□ -0.27
SCN1B-202ENST00000415950 RPAP3Q9H6T3 665 aaPredicted RBP13.38□□□□□ -0.27
SCN1B-202ENST00000415950 ASTN1O14525 1302 aa13.38□□□□□ -0.27
SCN1B-202ENST00000415950 KAT6AQ92794 2004 aa13.38□□□□□ -0.27
SCN1B-202ENST00000415950 PIK3CDO00329 1044 aa13.38□□□□□ -0.27
SCN1B-202ENST00000415950 PRKCBP05771 671 aa13.38□□□□□ -0.27
SCN1B-202ENST00000415950 SHMT1P34896 483 aa13.38□□□□□ -0.27
SCN1B-202ENST00000415950 RECQLP46063 649 aaPredicted RBP13.38□□□□□ -0.27
SCN1B-202ENST00000415950 STAT5BP51692 787 aa13.38□□□□□ -0.27
SCN1B-202ENST00000415950 COPAP53621 1224 aa13.38□□□□□ -0.27
SCN1B-202ENST00000415950 POLNQ7Z5Q5 900 aa13.38□□□□□ -0.27
SCN1B-202ENST00000415950 FAM136AQ96C01 138 aa13.38□□□□□ -0.27
SCN1B-202ENST00000415950 HOXC10Q9NYD6 342 aa13.38□□□□□ -0.27
SCN1B-202ENST00000415950 TMEM131LA2VDJ0 1609 aa13.38□□□□□ -0.27
SCN1B-202ENST00000415950 PGM3O95394 542 aa13.37□□□□□ -0.27
SCN1B-202ENST00000415950 KRT8P05787 483 aa13.37□□□□□ -0.27
SCN1B-202ENST00000415950 PRKCIP41743 596 aa13.37□□□□□ -0.27
SCN1B-202ENST00000415950 TMEM62Q0P6H9 643 aa13.37□□□□□ -0.27
SCN1B-202ENST00000415950 SGO1Q5FBB7 561 aa13.37□□□□□ -0.27
SCN1B-202ENST00000415950 LRRC74BQ6ZQY2 392 aa13.37□□□□□ -0.27
SCN1B-202ENST00000415950 ZNF662Q6ZS27 426 aa13.37□□□□□ -0.27
SCN1B-202ENST00000415950 OTOP1Q7RTM1 612 aa13.37□□□□□ -0.27
SCN1B-202ENST00000415950 CNDP1Q96KN2 507 aa13.37□□□□□ -0.27
SCN1B-202ENST00000415950 MCM8Q9UJA3 840 aa13.37□□□□□ -0.27
SCN1B-202ENST00000415950 R3HDM2Q9Y2K5 976 aaKnown RBP13.37□□□□□ -0.27
SCN1B-202ENST00000415950 DEAF1O75398 565 aaPredicted RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms