RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 KRT3P12035 628 aa10.25□□□□□ -0.77
CD44-206ENST00000415148 BRD2P25440 801 aaKnown RBP10.25□□□□□ -0.77
CD44-206ENST00000415148 NBPF20Q3BBV1 942 aa10.25□□□□□ -0.77
CD44-206ENST00000415148 TTC7BQ86TV6 843 aa10.25□□□□□ -0.77
CD44-206ENST00000415148 LRRC6Q86X45 466 aa10.25□□□□□ -0.77
CD44-206ENST00000415148 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.25□□□□□ -0.77
CD44-206ENST00000415148 ACTL9Q8TC94 416 aa10.25□□□□□ -0.77
CD44-206ENST00000415148 TCP10LQ8TDR4 215 aa10.25□□□□□ -0.77
CD44-206ENST00000415148 C12orf42Q96LP6 360 aa10.25□□□□□ -0.77
CD44-206ENST00000415148 CYTH2Q99418 400 aa10.25□□□□□ -0.77
CD44-206ENST00000415148 ZNF277Q9NRM2 450 aaPredicted RBP10.25□□□□□ -0.77
CD44-206ENST00000415148 ZNF214Q9UL59 606 aaPredicted RBP10.25□□□□□ -0.77
CD44-206ENST00000415148 MTO1Q9Y2Z2 717 aaKnown RBP10.25□□□□□ -0.77
CD44-206ENST00000415148 KAT6AQ92794 2004 aa10.25□□□□□ -0.77
CD44-206ENST00000415148 TCRBV7S3A2A0A539 114 aa10.24□□□□□ -0.77
CD44-206ENST00000415148 FAM189A1O60320 539 aa10.24□□□□□ -0.77
CD44-206ENST00000415148 CST8O60676 142 aa10.24□□□□□ -0.77
CD44-206ENST00000415148 TOM1L1O75674 476 aa10.24□□□□□ -0.77
CD44-206ENST00000415148 DHRS4L1P0CG22 281 aa10.24□□□□□ -0.77
CD44-206ENST00000415148 PSMA2P25787 234 aa10.24□□□□□ -0.77
CD44-206ENST00000415148 STIP1P31948 543 aaKnown RBP10.24□□□□□ -0.77
CD44-206ENST00000415148 MYL6P60660 151 aa10.24□□□□□ -0.77
CD44-206ENST00000415148 SLC18A2Q05940 514 aa10.24□□□□□ -0.77
CD44-206ENST00000415148 KPNB1Q14974 876 aaKnown RBP10.24□□□□□ -0.77
CD44-206ENST00000415148 TARBP2Q15633 366 aaKnown RBP10.24□□□□□ -0.77
CD44-206ENST00000415148 STXBP2Q15833 593 aa10.24□□□□□ -0.77
CD44-206ENST00000415148 ACSBG2Q5FVE4 666 aa10.24□□□□□ -0.77
CD44-206ENST00000415148 TMEM154Q6P9G4 183 aa10.24□□□□□ -0.77
CD44-206ENST00000415148 C4orf50Q6ZRC1 276 aa10.24□□□□□ -0.77
CD44-206ENST00000415148 RINLQ6ZS11 566 aa10.24□□□□□ -0.77
CD44-206ENST00000415148 RHPN2Q8IUC4 686 aa10.24□□□□□ -0.77
CD44-206ENST00000415148 APLFQ8IW19 511 aaPredicted RBP10.24□□□□□ -0.77
CD44-206ENST00000415148 KBTBD2Q8IY47 623 aa10.24□□□□□ -0.77
CD44-206ENST00000415148 FBXO36Q8NEA4 188 aa10.24□□□□□ -0.77
CD44-206ENST00000415148 DNERQ8NFT8 737 aa10.24□□□□□ -0.77
CD44-206ENST00000415148 CMASQ8NFW8 434 aaPredicted RBP10.24□□□□□ -0.77
CD44-206ENST00000415148 FBXO27Q8NI29 283 aa10.24□□□□□ -0.77
CD44-206ENST00000415148 DTX3LQ8TDB6 740 aa10.24□□□□□ -0.77
CD44-206ENST00000415148 FAM136AQ96C01 138 aa10.24□□□□□ -0.77
CD44-206ENST00000415148 BTBD10Q9BSF8 475 aa10.24□□□□□ -0.77
CD44-206ENST00000415148 ACAD9Q9H845 621 aa10.24□□□□□ -0.77
CD44-206ENST00000415148 CFAP69A5D8W1 941 aa10.24□□□□□ -0.77
CD44-206ENST00000415148 APOC4-APOC2K7ER74 178 aa10.24□□□□□ -0.77
CD44-206ENST00000415148 OGTO15294 1046 aa10.24□□□□□ -0.77
CD44-206ENST00000415148 APOC2P02655 101 aa10.24□□□□□ -0.77
CD44-206ENST00000415148 MT-ND3P03897 115 aa10.24□□□□□ -0.77
CD44-206ENST00000415148 RFC1P35251 1148 aaPredicted RBP10.24□□□□□ -0.77
CD44-206ENST00000415148 GDF10P55107 478 aa10.24□□□□□ -0.77
CD44-206ENST00000415148 CXCL9Q07325 125 aa10.24□□□□□ -0.77
CD44-206ENST00000415148 TRPC3Q13507 836 aa10.24□□□□□ -0.77
CD44-206ENST00000415148 KRT72Q14CN4 511 aa10.24□□□□□ -0.77
CD44-206ENST00000415148 FAM91A1Q658Y4 838 aa10.24□□□□□ -0.77
CD44-206ENST00000415148 SHKBP1Q8TBC3 707 aa10.24□□□□□ -0.77
CD44-206ENST00000415148 DNAJC9Q8WXX5 260 aa10.24□□□□□ -0.77
CD44-206ENST00000415148 APBB2Q92870 758 aa10.24□□□□□ -0.77
CD44-206ENST00000415148 NSL1Q96IY1 281 aa10.24□□□□□ -0.77
CD44-206ENST00000415148 WNK4Q96J92 1243 aa10.24□□□□□ -0.77
CD44-206ENST00000415148 ZNF333Q96JL9 665 aa10.24□□□□□ -0.77
CD44-206ENST00000415148 MRPL4Q9BYD3 311 aaKnown RBP10.24□□□□□ -0.77
CD44-206ENST00000415148 FRMD8Q9BZ67 464 aaPredicted RBP10.24□□□□□ -0.77
CD44-206ENST00000415148 ZCWPW1Q9H0M4 648 aa10.24□□□□□ -0.77
CD44-206ENST00000415148 PNPLA8Q9NP80 782 aa10.24□□□□□ -0.77
CD44-206ENST00000415148 POLIQ9UNA4 740 aa10.24□□□□□ -0.77
CD44-206ENST00000415148 SSC5DA1L4H1 1573 aa10.23□□□□□ -0.77
CD44-206ENST00000415148 RLFQ13129 1914 aa10.23□□□□□ -0.77
CD44-206ENST00000415148 DOCK5Q9H7D0 1870 aa10.23□□□□□ -0.77
CD44-206ENST00000415148 A0A0G2JND7 137 aa10.23□□□□□ -0.77
CD44-206ENST00000415148 C19orf81C9J6K1 198 aa10.23□□□□□ -0.77
CD44-206ENST00000415148 E5RJQ4 531 aa10.23□□□□□ -0.77
CD44-206ENST00000415148 KLF11O14901 512 aa10.23□□□□□ -0.77
CD44-206ENST00000415148 LRCH4O75427 683 aa10.23□□□□□ -0.77
CD44-206ENST00000415148 MAFO75444 373 aaPredicted RBP10.23□□□□□ -0.77
CD44-206ENST00000415148 EDN1P05305 212 aa10.23□□□□□ -0.77
CD44-206ENST00000415148 GNAT1P11488 350 aa10.23□□□□□ -0.77
CD44-206ENST00000415148 SP100P23497 879 aaPredicted RBP10.23□□□□□ -0.77
CD44-206ENST00000415148 YY1P25490 414 aa10.23□□□□□ -0.77
CD44-206ENST00000415148 SP2Q02086 613 aa10.23□□□□□ -0.77
CD44-206ENST00000415148 SP4Q02446 784 aa10.23□□□□□ -0.77
CD44-206ENST00000415148 BIRC2Q13490 618 aa10.23□□□□□ -0.77
CD44-206ENST00000415148 CAPSQ13938 189 aa10.23□□□□□ -0.77
CD44-206ENST00000415148 DPYSL3Q14195 570 aa10.23□□□□□ -0.77
CD44-206ENST00000415148 RCN1Q15293 331 aa10.23□□□□□ -0.77
CD44-206ENST00000415148 SYCP2LQ5T4T6 812 aa10.23□□□□□ -0.77
CD44-206ENST00000415148 ZNF280CQ8ND82 737 aa10.23□□□□□ -0.77
CD44-206ENST00000415148 TFAP2BQ92481 460 aa10.23□□□□□ -0.77
CD44-206ENST00000415148 PTCD3Q96EY7 689 aaKnown RBP10.23□□□□□ -0.77
CD44-206ENST00000415148 TSSK1BQ9BXA7 367 aa10.23□□□□□ -0.77
CD44-206ENST00000415148 TEX13BQ9BXU2 312 aa10.23□□□□□ -0.77
CD44-206ENST00000415148 MMADHCQ9H3L0 296 aaPredicted RBP10.23□□□□□ -0.77
CD44-206ENST00000415148 KCNK13Q9HB14 408 aa10.23□□□□□ -0.77
CD44-206ENST00000415148 DLGAP2Q9P1A6 1054 aa10.23□□□□□ -0.77
CD44-206ENST00000415148 XPO7Q9UIA9 1087 aaKnown RBP10.23□□□□□ -0.77
CD44-206ENST00000415148 SCAF8Q9UPN6 1271 aaKnown RBP10.23□□□□□ -0.77
CD44-206ENST00000415148 WASF2Q9Y6W5 498 aa10.23□□□□□ -0.77
CD44-206ENST00000415148 COL11A1P12107 1806 aaPredicted RBP10.23□□□□□ -0.77
CD44-206ENST00000415148 PHIPQ8WWQ0 1821 aa10.23□□□□□ -0.77
CD44-206ENST00000415148 MSCO60682 206 aa10.23□□□□□ -0.77
CD44-206ENST00000415148 LPXNO60711 386 aa10.23□□□□□ -0.77
CD44-206ENST00000415148 ACADSP16219 412 aa10.23□□□□□ -0.77
CD44-206ENST00000415148 ETV4P43268 484 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms