RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 TIAM1Q13009 1591 aa4.46□□□□□ -1.7
HMGB3P23-201ENST00000414981 AQRO60306 1485 aaKnown RBP eCLIP4.46□□□□□ -1.7
HMGB3P23-201ENST00000414981 A1L4Q6 167 aa4.46□□□□□ -1.7
HMGB3P23-201ENST00000414981 GOLGA6CA6NDK9 693 aa4.46□□□□□ -1.7
HMGB3P23-201ENST00000414981 GOLGA6BA6NDN3 693 aa4.46□□□□□ -1.7
HMGB3P23-201ENST00000414981 ISM1B1AKI9 464 aa4.46□□□□□ -1.7
HMGB3P23-201ENST00000414981 TARM1B6A8C7 271 aa4.46□□□□□ -1.7
HMGB3P23-201ENST00000414981 FAM227AF5H4B4 570 aa4.46□□□□□ -1.7
HMGB3P23-201ENST00000414981 MYO1FO00160 1098 aa4.46□□□□□ -1.7
HMGB3P23-201ENST00000414981 PRPF3O43395 683 aaKnown RBP4.46□□□□□ -1.7
HMGB3P23-201ENST00000414981 JTBO76095 146 aa4.46□□□□□ -1.7
HMGB3P23-201ENST00000414981 SCGB1D2O95969 90 aa4.46□□□□□ -1.7
HMGB3P23-201ENST00000414981 HNRNPCP07910 306 aaKnown RBP eCLIP4.46□□□□□ -1.7
HMGB3P23-201ENST00000414981 IL6RP08887 468 aaPredicted RBP4.46□□□□□ -1.7
HMGB3P23-201ENST00000414981 GOLGA6DP0CG33 693 aa4.46□□□□□ -1.7
HMGB3P23-201ENST00000414981 DRD4P21917 467 aa4.46□□□□□ -1.7
HMGB3P23-201ENST00000414981 LIPAP38571 399 aa4.46□□□□□ -1.7
HMGB3P23-201ENST00000414981 ATXN1P54253 815 aaKnown RBP4.46□□□□□ -1.7
HMGB3P23-201ENST00000414981 SP2Q02086 613 aa4.46□□□□□ -1.7
HMGB3P23-201ENST00000414981 MYO1EQ12965 1108 aa4.46□□□□□ -1.7
HMGB3P23-201ENST00000414981 RAB32Q13637 225 aa4.46□□□□□ -1.7
HMGB3P23-201ENST00000414981 MLC1Q15049 377 aa4.46□□□□□ -1.7
HMGB3P23-201ENST00000414981 ARHGAP29Q52LW3 1261 aa4.46□□□□□ -1.7
HMGB3P23-201ENST00000414981 TREML2Q5T2D2 321 aa4.46□□□□□ -1.7
HMGB3P23-201ENST00000414981 RGS7BPQ6MZT1 257 aaPredicted RBP4.46□□□□□ -1.7
HMGB3P23-201ENST00000414981 MTHFD1LQ6UB35 978 aa4.46□□□□□ -1.7
HMGB3P23-201ENST00000414981 CLEC4GQ6UXB4 293 aa4.46□□□□□ -1.7
HMGB3P23-201ENST00000414981 SRRM1Q8IYB3 904 aaKnown RBP4.46□□□□□ -1.7
HMGB3P23-201ENST00000414981 SEMA6DQ8NFY4 1073 aa4.46□□□□□ -1.7
HMGB3P23-201ENST00000414981 JDP2Q8WYK2 163 aa4.46□□□□□ -1.7
HMGB3P23-201ENST00000414981 ATG4AQ8WYN0 398 aa4.46□□□□□ -1.7
HMGB3P23-201ENST00000414981 SECISBP2LQ93073 1101 aaKnown RBP4.46□□□□□ -1.7
HMGB3P23-201ENST00000414981 FAM204AQ9H8W3 233 aa4.46□□□□□ -1.7
HMGB3P23-201ENST00000414981 GLOD4Q9HC38 313 aa4.46□□□□□ -1.7
HMGB3P23-201ENST00000414981 A1CFQ9NQ94 594 aaKnown RBP4.46□□□□□ -1.7
HMGB3P23-201ENST00000414981 GOLGA6AQ9NYA3 693 aa4.46□□□□□ -1.7
HMGB3P23-201ENST00000414981 RGS17Q9UGC6 210 aaPredicted RBP4.46□□□□□ -1.7
HMGB3P23-201ENST00000414981 FRMD4BQ9Y2L6 1034 aa4.46□□□□□ -1.7
HMGB3P23-201ENST00000414981 LRRC9Q6ZRR7 1453 aa4.45□□□□□ -1.7
HMGB3P23-201ENST00000414981 ARHGAP35Q9NRY4 1499 aa4.45□□□□□ -1.7
HMGB3P23-201ENST00000414981 hCG_1984214I3L0E3 225 aa4.45□□□□□ -1.7
HMGB3P23-201ENST00000414981 QSOX1O00391 747 aa4.45□□□□□ -1.7
HMGB3P23-201ENST00000414981 TSPAN6O43657 245 aa4.45□□□□□ -1.7
HMGB3P23-201ENST00000414981 TJP3O95049 919 aa4.45□□□□□ -1.7
HMGB3P23-201ENST00000414981 HRGP04196 525 aa4.45□□□□□ -1.7
HMGB3P23-201ENST00000414981 PRKCGP05129 697 aa4.45□□□□□ -1.7
HMGB3P23-201ENST00000414981 EBLN1P0CF75 366 aa4.45□□□□□ -1.7
HMGB3P23-201ENST00000414981 KCNA3P22001 575 aa4.45□□□□□ -1.7
HMGB3P23-201ENST00000414981 SLC7A1P30825 629 aa4.45□□□□□ -1.7
HMGB3P23-201ENST00000414981 CYP2C18P33260 490 aa4.45□□□□□ -1.7
HMGB3P23-201ENST00000414981 PDE6CP51160 858 aa4.45□□□□□ -1.7
HMGB3P23-201ENST00000414981 FOXF2Q12947 444 aa4.45□□□□□ -1.7
HMGB3P23-201ENST00000414981 EIF2B5Q13144 721 aaKnown RBP4.45□□□□□ -1.7
HMGB3P23-201ENST00000414981 SLC13A2Q13183 592 aa4.45□□□□□ -1.7
HMGB3P23-201ENST00000414981 SLC44A4Q53GD3 710 aa4.45□□□□□ -1.7
HMGB3P23-201ENST00000414981 SUMO4Q6EEV6 95 aa4.45□□□□□ -1.7
HMGB3P23-201ENST00000414981 KRBA2Q6ZNG9 492 aa4.45□□□□□ -1.7
HMGB3P23-201ENST00000414981 CHST15Q7LFX5 561 aaPredicted RBP4.45□□□□□ -1.7
HMGB3P23-201ENST00000414981 ZNF804AQ7Z570 1209 aa4.45□□□□□ -1.7
HMGB3P23-201ENST00000414981 SRGAP1Q7Z6B7 1085 aa4.45□□□□□ -1.7
HMGB3P23-201ENST00000414981 ZNF280BQ86YH2 543 aa4.45□□□□□ -1.7
HMGB3P23-201ENST00000414981 SLC15A3Q8IY34 581 aa4.45□□□□□ -1.7
HMGB3P23-201ENST00000414981 MYO1HQ8N1T3 1032 aa4.45□□□□□ -1.7
HMGB3P23-201ENST00000414981 GLG1Q92896 1179 aa4.45□□□□□ -1.7
HMGB3P23-201ENST00000414981 C22orf23Q9BZE7 217 aa4.45□□□□□ -1.7
HMGB3P23-201ENST00000414981 DUSP22Q9NRW4 184 aa4.45□□□□□ -1.7
HMGB3P23-201ENST00000414981 TPCN1Q9ULQ1 816 aa4.45□□□□□ -1.7
HMGB3P23-201ENST00000414981 MRPS17Q9Y2R5 130 aaKnown RBP4.45□□□□□ -1.7
HMGB3P23-201ENST00000414981 USP19O94966 1318 aa4.45□□□□□ -1.7
HMGB3P23-201ENST00000414981 UNC13AQ9UPW8 1703 aa4.44□□□□□ -1.7
HMGB3P23-201ENST00000414981 WDR97A6NE52 1622 aa4.44□□□□□ -1.7
HMGB3P23-201ENST00000414981 CFAP69A5D8W1 941 aa4.44□□□□□ -1.7
HMGB3P23-201ENST00000414981 WIPF3A6NGB9 483 aa4.44□□□□□ -1.7
HMGB3P23-201ENST00000414981 H0YIZ8 118 aa4.44□□□□□ -1.7
HMGB3P23-201ENST00000414981 SH3BP5O60239 455 aa4.44□□□□□ -1.7
HMGB3P23-201ENST00000414981 EIF3JO75822 258 aaKnown RBP4.44□□□□□ -1.7
HMGB3P23-201ENST00000414981 CSF1RP07333 972 aa4.44□□□□□ -1.7
HMGB3P23-201ENST00000414981 DLDP09622 509 aaKnown RBP4.44□□□□□ -1.7
HMGB3P23-201ENST00000414981 MYBP10242 640 aa4.44□□□□□ -1.7
HMGB3P23-201ENST00000414981 CACNB3P54284 484 aa4.44□□□□□ -1.7
HMGB3P23-201ENST00000414981 PDE1AP54750 535 aa4.44□□□□□ -1.7
HMGB3P23-201ENST00000414981 SUMO3P55854 103 aaPredicted RBP4.44□□□□□ -1.7
HMGB3P23-201ENST00000414981 EEFSECP57772 596 aaKnown RBP4.44□□□□□ -1.7
HMGB3P23-201ENST00000414981 PROK1P58294 105 aa4.44□□□□□ -1.7
HMGB3P23-201ENST00000414981 TFF2Q03403 129 aa4.44□□□□□ -1.7
HMGB3P23-201ENST00000414981 CNN3Q15417 329 aaKnown RBP4.44□□□□□ -1.7
HMGB3P23-201ENST00000414981 PLA1AQ53H76 456 aa4.44□□□□□ -1.7
HMGB3P23-201ENST00000414981 AMIGO2Q86SJ2 522 aa4.44□□□□□ -1.7
HMGB3P23-201ENST00000414981 ABRAQ8N0Z2 381 aa4.44□□□□□ -1.7
HMGB3P23-201ENST00000414981 FANCBQ8NB91 859 aa4.44□□□□□ -1.7
HMGB3P23-201ENST00000414981 PPP2R3CQ969Q6 453 aa4.44□□□□□ -1.7
HMGB3P23-201ENST00000414981 NMD3Q96D46 503 aaKnown RBP4.44□□□□□ -1.7
HMGB3P23-201ENST00000414981 RSPRY1Q96DX4 576 aa4.44□□□□□ -1.7
HMGB3P23-201ENST00000414981 MS4A7Q9GZW8 240 aaPredicted RBP4.44□□□□□ -1.7
HMGB3P23-201ENST00000414981 CXorf36Q9H7Y0 433 aa4.44□□□□□ -1.7
HMGB3P23-201ENST00000414981 TRMT13Q9NUP7 481 aaKnown RBP4.44□□□□□ -1.7
HMGB3P23-201ENST00000414981 GABRQQ9UN88 632 aa4.44□□□□□ -1.7
HMGB3P23-201ENST00000414981 HMGXB3Q12766 1538 aa4.44□□□□□ -1.7
HMGB3P23-201ENST00000414981 CCDC18Q5T9S5 1454 aa4.43□□□□□ -1.7
HMGB3P23-201ENST00000414981 ZNF213O14771 459 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms