RNA–Protein interactions for RNA: ENST00000414861.6

RIF1-202, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-202ENST00000414861 C18orf8Q96DM3 657 aa10.22□□□□□ -0.77
RIF1-202ENST00000414861 VCPIP1Q96JH7 1222 aa10.22□□□□□ -0.77
RIF1-202ENST00000414861 BTBD6Q96KE9 485 aa10.22□□□□□ -0.77
RIF1-202ENST00000414861 CLSTN3Q9BQT9 956 aa10.22□□□□□ -0.77
RIF1-202ENST00000414861 ZBP1Q9H171 429 aa10.22□□□□□ -0.77
RIF1-202ENST00000414861 SYNCQ9H7C4 482 aa10.22□□□□□ -0.77
RIF1-202ENST00000414861 ALG13Q9NP73 1137 aaKnown RBP10.22□□□□□ -0.77
RIF1-202ENST00000414861 AVENQ9NQS1 362 aaPredicted RBP10.22□□□□□ -0.77
RIF1-202ENST00000414861 CTTNBP2NLQ9P2B4 639 aa10.22□□□□□ -0.77
RIF1-202ENST00000414861 MTMR11A4FU01 709 aa10.21□□□□□ -0.77
RIF1-202ENST00000414861 HHLA1C9JL84 531 aa10.21□□□□□ -0.77
RIF1-202ENST00000414861 F8VP50 259 aa10.21□□□□□ -0.77
RIF1-202ENST00000414861 URODP06132 367 aa10.21□□□□□ -0.77
RIF1-202ENST00000414861 MYBL1P10243 752 aa10.21□□□□□ -0.77
RIF1-202ENST00000414861 DNAJB1P25685 340 aa10.21□□□□□ -0.77
RIF1-202ENST00000414861 OR1D2P34982 312 aa10.21□□□□□ -0.77
RIF1-202ENST00000414861 NOP2P46087 812 aaKnown RBP10.21□□□□□ -0.77
RIF1-202ENST00000414861 GABRB2P47870 512 aa10.21□□□□□ -0.77
RIF1-202ENST00000414861 RPL34P49207 117 aaKnown RBP10.21□□□□□ -0.77
RIF1-202ENST00000414861 GPR15P49685 360 aa10.21□□□□□ -0.77
RIF1-202ENST00000414861 NAP1L1P55209 391 aaKnown RBP10.21□□□□□ -0.77
RIF1-202ENST00000414861 GNG11P61952 73 aa10.21□□□□□ -0.77
RIF1-202ENST00000414861 ZNF569Q5MCW4 686 aa10.21□□□□□ -0.77
RIF1-202ENST00000414861 PLEKHA7Q6IQ23 1121 aa10.21□□□□□ -0.77
RIF1-202ENST00000414861 FAM183BPQ6ZVS7 135 aa10.21□□□□□ -0.77
RIF1-202ENST00000414861 DCP1BQ8IZD4 617 aaKnown RBP10.21□□□□□ -0.77
RIF1-202ENST00000414861 SLC35F6Q8N357 371 aa10.21□□□□□ -0.77
RIF1-202ENST00000414861 STKLD1Q8NE28 680 aa10.21□□□□□ -0.77
RIF1-202ENST00000414861 ZNF564Q8TBZ8 553 aaPredicted RBP10.21□□□□□ -0.77
RIF1-202ENST00000414861 IPO4Q8TEX9 1081 aaKnown RBP10.21□□□□□ -0.77
RIF1-202ENST00000414861 TRIM11Q96F44 468 aa10.21□□□□□ -0.77
RIF1-202ENST00000414861 NOX5Q96PH1 765 aa10.21□□□□□ -0.77
RIF1-202ENST00000414861 CSNK1G1Q9HCP0 422 aa10.21□□□□□ -0.77
RIF1-202ENST00000414861 BACE2Q9Y5Z0 518 aa10.21□□□□□ -0.77
RIF1-202ENST00000414861 PLXNA3P51805 1871 aa10.21□□□□□ -0.78
RIF1-202ENST00000414861 CARNS1A5YM72 827 aa10.21□□□□□ -0.78
RIF1-202ENST00000414861 GOLGA8SH3BPF8 625 aa10.21□□□□□ -0.78
RIF1-202ENST00000414861 PAPSS1O43252 624 aaPredicted RBP10.21□□□□□ -0.78
RIF1-202ENST00000414861 KIF5CO60282 957 aa10.21□□□□□ -0.78
RIF1-202ENST00000414861 SOAT2O75908 522 aa10.21□□□□□ -0.78
RIF1-202ENST00000414861 KRT17Q04695 432 aa10.21□□□□□ -0.78
RIF1-202ENST00000414861 ADIGQ0VDE8 80 aa10.21□□□□□ -0.78
RIF1-202ENST00000414861 GPR17Q13304 367 aa10.21□□□□□ -0.78
RIF1-202ENST00000414861 PTPROQ16827 1216 aa10.21□□□□□ -0.78
RIF1-202ENST00000414861 CFAP221Q4G0U5 840 aa10.21□□□□□ -0.78
RIF1-202ENST00000414861 LIN9Q5TKA1 542 aa10.21□□□□□ -0.78
RIF1-202ENST00000414861 PPP1R2P3Q6NXS1 205 aa10.21□□□□□ -0.78
RIF1-202ENST00000414861 SYT10Q6XYQ8 523 aa10.21□□□□□ -0.78
RIF1-202ENST00000414861 C4orf50Q6ZRC1 276 aa10.21□□□□□ -0.78
RIF1-202ENST00000414861 TMEM110Q86TL2 294 aa10.21□□□□□ -0.78
RIF1-202ENST00000414861 CPNE8Q86YQ8 564 aa10.21□□□□□ -0.78
RIF1-202ENST00000414861 C3orf20Q8ND61 904 aa10.21□□□□□ -0.78
RIF1-202ENST00000414861 TPCN2Q8NHX9 752 aa10.21□□□□□ -0.78
RIF1-202ENST00000414861 STK32AQ8WU08 396 aa10.21□□□□□ -0.78
RIF1-202ENST00000414861 PBX4Q9BYU1 374 aa10.21□□□□□ -0.78
RIF1-202ENST00000414861 PCDHGC5Q9Y5F6 944 aa10.21□□□□□ -0.78
RIF1-202ENST00000414861 BUB1BO60566 1050 aaPredicted RBP10.2□□□□□ -0.78
RIF1-202ENST00000414861 PALMO75781 387 aa10.2□□□□□ -0.78
RIF1-202ENST00000414861 MTA2O94776 668 aa10.2□□□□□ -0.78
RIF1-202ENST00000414861 LCP1P13796 627 aa10.2□□□□□ -0.78
RIF1-202ENST00000414861 TNNT1P13805 278 aa10.2□□□□□ -0.78
RIF1-202ENST00000414861 NDUFV1P49821 464 aa10.2□□□□□ -0.78
RIF1-202ENST00000414861 GSCP56915 257 aaPredicted RBP10.2□□□□□ -0.78
RIF1-202ENST00000414861 RPL7AP62424 266 aaKnown RBP10.2□□□□□ -0.78
RIF1-202ENST00000414861 ETF1P62495 437 aaKnown RBP10.2□□□□□ -0.78
RIF1-202ENST00000414861 NFE2Q16621 373 aaPredicted RBP10.2□□□□□ -0.78
RIF1-202ENST00000414861 PPP1R15BQ5SWA1 713 aa10.2□□□□□ -0.78
RIF1-202ENST00000414861 SDHAF4Q5VUM1 108 aa10.2□□□□□ -0.78
RIF1-202ENST00000414861 DNAJC24Q6P3W2 148 aa10.2□□□□□ -0.78
RIF1-202ENST00000414861 OLFML1Q6UWY5 402 aa10.2□□□□□ -0.78
RIF1-202ENST00000414861 SCUBE3Q8IX30 993 aa10.2□□□□□ -0.78
RIF1-202ENST00000414861 RHOT2Q8IXI1 618 aa10.2□□□□□ -0.78
RIF1-202ENST00000414861 RNF10Q8N5U6 811 aaKnown RBP10.2□□□□□ -0.78
RIF1-202ENST00000414861 LRRC57Q8N9N7 239 aa10.2□□□□□ -0.78
RIF1-202ENST00000414861 NDRG1Q92597 394 aaKnown RBP10.2□□□□□ -0.78
RIF1-202ENST00000414861 MIS12Q9H081 205 aa10.2□□□□□ -0.78
RIF1-202ENST00000414861 DMAP1Q9NPF5 467 aaPredicted RBP10.2□□□□□ -0.78
RIF1-202ENST00000414861 METTL5Q9NRN9 209 aaKnown RBP10.2□□□□□ -0.78
RIF1-202ENST00000414861 UVRAGQ9P2Y5 699 aa10.2□□□□□ -0.78
RIF1-202ENST00000414861 STRIP2Q9ULQ0 834 aa10.2□□□□□ -0.78
RIF1-202ENST00000414861 PCDHB5Q9Y5E4 795 aa10.2□□□□□ -0.78
RIF1-202ENST00000414861 PCDHA11Q9Y5I1 949 aa10.2□□□□□ -0.78
RIF1-202ENST00000414861 TRIOBPQ9H2D6 2365 aa10.2□□□□□ -0.78
RIF1-202ENST00000414861 LILRB3O75022 631 aa10.2□□□□□ -0.78
RIF1-202ENST00000414861 CTSAP10619 480 aa10.2□□□□□ -0.78
RIF1-202ENST00000414861 ERVFC1P60507 584 aa10.2□□□□□ -0.78
RIF1-202ENST00000414861 TAP1Q03518 808 aa10.2□□□□□ -0.78
RIF1-202ENST00000414861 ADCY1Q08828 1119 aa10.2□□□□□ -0.78
RIF1-202ENST00000414861 TCEAL1Q15170 157 aa10.2□□□□□ -0.78
RIF1-202ENST00000414861 TAF5Q15542 800 aa10.2□□□□□ -0.78
RIF1-202ENST00000414861 MSANTD4Q8NCY6 345 aa10.2□□□□□ -0.78
RIF1-202ENST00000414861 JOSD2Q8TAC2 188 aa10.2□□□□□ -0.78
RIF1-202ENST00000414861 MCRS1Q96EZ8 462 aa10.2□□□□□ -0.78
RIF1-202ENST00000414861 FUBP3Q96I24 572 aaKnown RBP eCLIP10.2□□□□□ -0.78
RIF1-202ENST00000414861 HSFY1Q96LI6 401 aa10.2□□□□□ -0.78
RIF1-202ENST00000414861 MCEEQ96PE7 176 aa10.2□□□□□ -0.78
RIF1-202ENST00000414861 MRPL17Q9NRX2 175 aaKnown RBP10.2□□□□□ -0.78
RIF1-202ENST00000414861 DNAI1Q9UI46 699 aa10.2□□□□□ -0.78
RIF1-202ENST00000414861 ANAPC7Q9UJX3 599 aa10.2□□□□□ -0.78
RIF1-202ENST00000414861 SLC27A5Q9Y2P5 690 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms