RNA–Protein interactions for RNA: ENST00000414711.5

CPNE1-208, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-208ENST00000414711 A0A1B0GTW7 788 aa16.99■□□□□ 0.31
CPNE1-208ENST00000414711 C2orf78A6NCI8 922 aa16.99■□□□□ 0.31
CPNE1-208ENST00000414711 NDUFS2O75306 463 aa16.99■□□□□ 0.31
CPNE1-208ENST00000414711 NOL4O94818 638 aa16.99■□□□□ 0.31
CPNE1-208ENST00000414711 HOXB2P14652 356 aa16.99■□□□□ 0.31
CPNE1-208ENST00000414711 XBP1P17861 261 aa16.99■□□□□ 0.31
CPNE1-208ENST00000414711 MATKP42679 507 aa16.99■□□□□ 0.31
CPNE1-208ENST00000414711 TNFRSF4P43489 277 aa16.99■□□□□ 0.31
CPNE1-208ENST00000414711 CPLX2Q6PUV4 134 aaKnown RBP16.99■□□□□ 0.31
CPNE1-208ENST00000414711 DHRS13Q6UX07 377 aa16.99■□□□□ 0.31
CPNE1-208ENST00000414711 TRMT11Q7Z4G4 463 aaKnown RBP16.99■□□□□ 0.31
CPNE1-208ENST00000414711 FILIP1Q7Z7B0 1213 aa16.99■□□□□ 0.31
CPNE1-208ENST00000414711 THEM5Q8N1Q8 247 aa16.99■□□□□ 0.31
CPNE1-208ENST00000414711 ZCCHC9Q8N567 271 aaKnown RBP16.99■□□□□ 0.31
CPNE1-208ENST00000414711 BTBD3Q9Y2F9 522 aa16.99■□□□□ 0.31
CPNE1-208ENST00000414711 PCDHB5Q9Y5E4 795 aa16.99■□□□□ 0.31
CPNE1-208ENST00000414711 PCDHGB2Q9Y5G2 931 aa16.99■□□□□ 0.31
CPNE1-208ENST00000414711 A0A0A0MRY4 1105 aa16.98■□□□□ 0.31
CPNE1-208ENST00000414711 TNFSF14O43557 240 aa16.98■□□□□ 0.31
CPNE1-208ENST00000414711 PRPF40AO75400 957 aaKnown RBP16.98■□□□□ 0.31
CPNE1-208ENST00000414711 NDUFV2P19404 249 aa16.98■□□□□ 0.31
CPNE1-208ENST00000414711 PAX3P23760 479 aa16.98■□□□□ 0.31
CPNE1-208ENST00000414711 RPA1P27694 616 aa16.98■□□□□ 0.31
CPNE1-208ENST00000414711 CXADRP78310 365 aa16.98■□□□□ 0.31
CPNE1-208ENST00000414711 NR5A1Q13285 461 aa16.98■□□□□ 0.31
CPNE1-208ENST00000414711 DHCR24Q15392 516 aa16.98■□□□□ 0.31
CPNE1-208ENST00000414711 PTPRNQ16849 979 aa16.98■□□□□ 0.31
CPNE1-208ENST00000414711 C6orf118Q5T5N4 469 aa16.98■□□□□ 0.31
CPNE1-208ENST00000414711 IL27RAQ6UWB1 636 aa16.98■□□□□ 0.31
CPNE1-208ENST00000414711 SKAP1Q86WV1 359 aa16.98■□□□□ 0.31
CPNE1-208ENST00000414711 METTL23Q86XA0 190 aa16.98■□□□□ 0.31
CPNE1-208ENST00000414711 DCP1BQ8IZD4 617 aaKnown RBP16.98■□□□□ 0.31
CPNE1-208ENST00000414711 ZNF513Q8N8E2 541 aaPredicted RBP16.98■□□□□ 0.31
CPNE1-208ENST00000414711 MYRFLQ96LU7 910 aa16.98■□□□□ 0.31
CPNE1-208ENST00000414711 BHMT2Q9H2M3 363 aa16.98■□□□□ 0.31
CPNE1-208ENST00000414711 KMT5AQ9NQR1 393 aa16.98■□□□□ 0.31
CPNE1-208ENST00000414711 MEI4A8MW99 385 aa16.97■□□□□ 0.31
CPNE1-208ENST00000414711 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.97■□□□□ 0.31
CPNE1-208ENST00000414711 B8ZZF3 427 aa16.97■□□□□ 0.31
CPNE1-208ENST00000414711 WNT7AO00755 349 aa16.97■□□□□ 0.31
CPNE1-208ENST00000414711 ZBTB24O43167 697 aaPredicted RBP16.97■□□□□ 0.31
CPNE1-208ENST00000414711 CLTAP09496 248 aa16.97■□□□□ 0.31
CPNE1-208ENST00000414711 HDCP19113 662 aa16.97■□□□□ 0.31
CPNE1-208ENST00000414711 HLA-BQ31612 363 aa16.97■□□□□ 0.31
CPNE1-208ENST00000414711 DBX2Q6ZNG2 339 aa16.97■□□□□ 0.31
CPNE1-208ENST00000414711 TMPRSS12Q86WS5 348 aa16.97■□□□□ 0.31
CPNE1-208ENST00000414711 SNIP1Q8TAD8 396 aaKnown RBP16.97■□□□□ 0.31
CPNE1-208ENST00000414711 ERMNQ8TAM6 284 aa16.97■□□□□ 0.31
CPNE1-208ENST00000414711 LRRC15Q8TF66 581 aa16.97■□□□□ 0.31
CPNE1-208ENST00000414711 KCNB2Q92953 911 aa16.97■□□□□ 0.31
CPNE1-208ENST00000414711 ARID3AQ99856 593 aa16.97■□□□□ 0.31
CPNE1-208ENST00000414711 CD93Q9NPY3 652 aa16.97■□□□□ 0.31
CPNE1-208ENST00000414711 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.97■□□□□ 0.312e-6■■■■■ 55.4
CPNE1-208ENST00000414711 A0A1W2PQF6 199 aa16.96■□□□□ 0.31
CPNE1-208ENST00000414711 BTBD18B2RXH4 712 aa16.96■□□□□ 0.31
CPNE1-208ENST00000414711 LEFTY2O00292 366 aa16.96■□□□□ 0.31
CPNE1-208ENST00000414711 ADH1CP00326 375 aa16.96■□□□□ 0.31
CPNE1-208ENST00000414711 NTRK1P04629 796 aa16.96■□□□□ 0.31
CPNE1-208ENST00000414711 PDE6CP51160 858 aa16.96■□□□□ 0.31
CPNE1-208ENST00000414711 RPL10AP62906 217 aaKnown RBP16.96■□□□□ 0.31
CPNE1-208ENST00000414711 ZXDBP98169 803 aa16.96■□□□□ 0.31
CPNE1-208ENST00000414711 ATP2C1P98194 919 aaPredicted RBP16.96■□□□□ 0.31
CPNE1-208ENST00000414711 TLE3Q04726 772 aa16.96■□□□□ 0.31
CPNE1-208ENST00000414711 MCL1Q07820 350 aa16.96■□□□□ 0.31
CPNE1-208ENST00000414711 MYO1EQ12965 1108 aa16.96■□□□□ 0.31
CPNE1-208ENST00000414711 STRN3Q13033 797 aa16.96■□□□□ 0.31
CPNE1-208ENST00000414711 SAFBQ15424 915 aaKnown RBP eCLIP16.96■□□□□ 0.311e-17■■■■□ 20.2
CPNE1-208ENST00000414711 DDR2Q16832 855 aa16.96■□□□□ 0.31
CPNE1-208ENST00000414711 PREPLQ4J6C6 727 aaPredicted RBP16.96■□□□□ 0.31
CPNE1-208ENST00000414711 SPATA1Q5VX52 437 aa16.96■□□□□ 0.31
CPNE1-208ENST00000414711 C9orf57Q5W0N0 161 aa16.96■□□□□ 0.31
CPNE1-208ENST00000414711 FMNL3Q8IVF7 1028 aa16.96■□□□□ 0.31
CPNE1-208ENST00000414711 ADGRG2Q8IZP9 1017 aa16.96■□□□□ 0.31
CPNE1-208ENST00000414711 PHTF2Q8N3S3 785 aa16.96■□□□□ 0.31
CPNE1-208ENST00000414711 FSIP1Q8NA03 581 aa16.96■□□□□ 0.31
CPNE1-208ENST00000414711 KCNV2Q8TDN2 545 aa16.96■□□□□ 0.31
CPNE1-208ENST00000414711 TNFRSF25Q93038 417 aa16.96■□□□□ 0.31
CPNE1-208ENST00000414711 TMLHEQ9NVH6 421 aa16.96■□□□□ 0.31
CPNE1-208ENST00000414711 RBM19Q9Y4C8 960 aaKnown RBP16.96■□□□□ 0.31
CPNE1-208ENST00000414711 SNX14Q9Y5W7 946 aa16.96■□□□□ 0.31
CPNE1-208ENST00000414711 AK5Q9Y6K8 562 aa16.96■□□□□ 0.31
CPNE1-208ENST00000414711 MYO18AQ92614 2054 aaKnown RBP16.95■□□□□ 0.3
CPNE1-208ENST00000414711 KNTC1P50748 2209 aa16.95■□□□□ 0.3
CPNE1-208ENST00000414711 LACTBL1A8MY62 500 aa16.95■□□□□ 0.3
CPNE1-208ENST00000414711 SCAMP3O14828 347 aaKnown RBP16.95■□□□□ 0.3
CPNE1-208ENST00000414711 CLDN3O15551 220 aa16.95■□□□□ 0.3
CPNE1-208ENST00000414711 SLC28A2O43868 658 aa16.95■□□□□ 0.3
CPNE1-208ENST00000414711 ADH5P11766 374 aa16.95■□□□□ 0.3
CPNE1-208ENST00000414711 KRT2P35908 639 aa16.95■□□□□ 0.3
CPNE1-208ENST00000414711 TNFSF9P41273 254 aa16.95■□□□□ 0.3
CPNE1-208ENST00000414711 WASP42768 502 aa16.95■□□□□ 0.3
CPNE1-208ENST00000414711 MATR3P43243 847 aaKnown RBP eCLIP16.95■□□□□ 0.3
CPNE1-208ENST00000414711 BNC1Q01954 994 aa16.95■□□□□ 0.3
CPNE1-208ENST00000414711 TOB2Q14106 344 aaPredicted RBP16.95■□□□□ 0.3
CPNE1-208ENST00000414711 WSCD1Q658N2 575 aa16.95■□□□□ 0.3
CPNE1-208ENST00000414711 DAW1Q8N136 415 aa16.95■□□□□ 0.3
CPNE1-208ENST00000414711 DNASE2BQ8WZ79 361 aa16.95■□□□□ 0.3
CPNE1-208ENST00000414711 WBP1Q96G27 269 aa16.95■□□□□ 0.3
CPNE1-208ENST00000414711 PYM1Q9BRP8 204 aaKnown RBP16.95■□□□□ 0.3
CPNE1-208ENST00000414711 SEMA4CQ9C0C4 833 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms