RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 ZNF358Q9NW07 568 aa9.87□□□□□ -0.83
SNHG3-201ENST00000413987 ADAMTS5Q9UNA0 930 aa9.87□□□□□ -0.83
SNHG3-201ENST00000413987 TFR2Q9UP52 801 aa9.87□□□□□ -0.83
SNHG3-201ENST00000413987 MRPL11Q9Y3B7 192 aaKnown RBP9.87□□□□□ -0.83
SNHG3-201ENST00000413987 ZNF711Q9Y462 761 aa9.87□□□□□ -0.83
SNHG3-201ENST00000413987 PCDHA13Q9Y5I0 950 aa9.87□□□□□ -0.83
SNHG3-201ENST00000413987 CCL15-CCL14A0A0B4J2E2 113 aa9.86□□□□□ -0.83
SNHG3-201ENST00000413987 POTEMA6NI47 508 aa9.86□□□□□ -0.83
SNHG3-201ENST00000413987 LCA5LO95447 670 aa9.86□□□□□ -0.83
SNHG3-201ENST00000413987 RPSAP08865 295 aaKnown RBP9.86□□□□□ -0.83
SNHG3-201ENST00000413987 POU2F2P09086 479 aa9.86□□□□□ -0.83
SNHG3-201ENST00000413987 EIF2AK2P19525 551 aaKnown RBP9.86□□□□□ -0.83
SNHG3-201ENST00000413987 TECP42680 631 aa9.86□□□□□ -0.83
SNHG3-201ENST00000413987 CARSP49589 748 aaKnown RBP9.86□□□□□ -0.83
SNHG3-201ENST00000413987 TUBP50607 506 aa9.86□□□□□ -0.83
SNHG3-201ENST00000413987 GUCY2DQ02846 1103 aa9.86□□□□□ -0.83
SNHG3-201ENST00000413987 SNAPC2Q13487 334 aa9.86□□□□□ -0.83
SNHG3-201ENST00000413987 MBTPS1Q14703 1052 aa9.86□□□□□ -0.83
SNHG3-201ENST00000413987 LLGL1Q15334 1064 aa9.86□□□□□ -0.83
SNHG3-201ENST00000413987 CCL15Q16663 113 aa9.86□□□□□ -0.83
SNHG3-201ENST00000413987 INAVAQ3KP66 663 aa9.86□□□□□ -0.83
SNHG3-201ENST00000413987 RAB12Q6IQ22 244 aa9.86□□□□□ -0.83
SNHG3-201ENST00000413987 NFRKBQ6P4R8 1299 aa9.86□□□□□ -0.83
SNHG3-201ENST00000413987 IRF2BP1Q8IU81 584 aa9.86□□□□□ -0.83
SNHG3-201ENST00000413987 TRIM42Q8IWZ5 723 aa9.86□□□□□ -0.83
SNHG3-201ENST00000413987 ADSSL1Q8N142 457 aa9.86□□□□□ -0.83
SNHG3-201ENST00000413987 NUP93Q8N1F7 819 aa9.86□□□□□ -0.83
SNHG3-201ENST00000413987 AVL9Q8NBF6 648 aa9.86□□□□□ -0.83
SNHG3-201ENST00000413987 FAM156AQ8NDB6 213 aa9.86□□□□□ -0.83
SNHG3-201ENST00000413987 GOT1L1Q8NHS2 421 aaPredicted RBP9.86□□□□□ -0.83
SNHG3-201ENST00000413987 DENND1AQ8TEH3 1009 aa9.86□□□□□ -0.83
SNHG3-201ENST00000413987 IFT81Q8WYA0 676 aa9.86□□□□□ -0.83
SNHG3-201ENST00000413987 MFSD14AQ96MC6 490 aa9.86□□□□□ -0.83
SNHG3-201ENST00000413987 ZIC5Q96T25 663 aa9.86□□□□□ -0.83
SNHG3-201ENST00000413987 MOV10L1Q9BXT6 1211 aaKnown RBP9.86□□□□□ -0.83
SNHG3-201ENST00000413987 C2orf40Q9H1Z8 148 aa9.86□□□□□ -0.83
SNHG3-201ENST00000413987 RBM12Q9NTZ6 932 aaKnown RBP9.86□□□□□ -0.83
SNHG3-201ENST00000413987 PKD2L1Q9P0L9 805 aa9.86□□□□□ -0.83
SNHG3-201ENST00000413987 DDX25Q9UHL0 483 aaKnown RBP9.86□□□□□ -0.83
SNHG3-201ENST00000413987 GPSM3Q9Y4H4 160 aa9.86□□□□□ -0.83
SNHG3-201ENST00000413987 ZFP37Q9Y6Q3 630 aaPredicted RBP9.86□□□□□ -0.83
SNHG3-201ENST00000413987 DUSP10Q9Y6W6 482 aa9.86□□□□□ -0.83
SNHG3-201ENST00000413987 BTBD19C9JJ37 291 aa9.86□□□□□ -0.83
SNHG3-201ENST00000413987 AP3B1O00203 1094 aa9.86□□□□□ -0.83
SNHG3-201ENST00000413987 CACNB4O00305 520 aaPredicted RBP9.86□□□□□ -0.83
SNHG3-201ENST00000413987 CXCL11O14625 94 aa9.86□□□□□ -0.83
SNHG3-201ENST00000413987 PSMA7O14818 248 aa9.86□□□□□ -0.83
SNHG3-201ENST00000413987 PJA2O43164 708 aa9.86□□□□□ -0.83
SNHG3-201ENST00000413987 TSPAN3O60637 253 aa9.86□□□□□ -0.83
SNHG3-201ENST00000413987 TBCAO75347 108 aaKnown RBP9.86□□□□□ -0.83
SNHG3-201ENST00000413987 ZBED1O96006 694 aa9.86□□□□□ -0.83
SNHG3-201ENST00000413987 HARSP12081 509 aaKnown RBP9.86□□□□□ -0.83
SNHG3-201ENST00000413987 HSPA6P17066 643 aa9.86□□□□□ -0.83
SNHG3-201ENST00000413987 PRCPP42785 496 aa9.86□□□□□ -0.83
SNHG3-201ENST00000413987 ZNF157P51786 506 aaPredicted RBP9.86□□□□□ -0.83
SNHG3-201ENST00000413987 PPP2R2AP63151 447 aa9.86□□□□□ -0.83
SNHG3-201ENST00000413987 PTK2Q05397 1052 aa9.86□□□□□ -0.83
SNHG3-201ENST00000413987 LAPTM5Q13571 262 aa9.86□□□□□ -0.83
SNHG3-201ENST00000413987 BAATQ14032 418 aaPredicted RBP9.86□□□□□ -0.83
SNHG3-201ENST00000413987 MAP7Q14244 749 aa9.86□□□□□ -0.83
SNHG3-201ENST00000413987 ARHGEF6Q15052 776 aa9.86□□□□□ -0.83
SNHG3-201ENST00000413987 CMTR2Q8IYT2 770 aaKnown RBP9.86□□□□□ -0.83
SNHG3-201ENST00000413987 ANKS4BQ8N8V4 417 aa9.86□□□□□ -0.83
SNHG3-201ENST00000413987 TNIP2Q8NFZ5 429 aa9.86□□□□□ -0.83
SNHG3-201ENST00000413987 CRYGNQ8WXF5 182 aa9.86□□□□□ -0.83
SNHG3-201ENST00000413987 STAMQ92783 540 aa9.86□□□□□ -0.83
SNHG3-201ENST00000413987 TATDN2Q93075 761 aa9.86□□□□□ -0.83
SNHG3-201ENST00000413987 SPDL1Q96EA4 605 aa9.86□□□□□ -0.83
SNHG3-201ENST00000413987 NOX5Q96PH1 765 aa9.86□□□□□ -0.83
SNHG3-201ENST00000413987 TAAR1Q96RJ0 339 aa9.86□□□□□ -0.83
SNHG3-201ENST00000413987 NCOR1P1Q9H4R4 102 aa9.86□□□□□ -0.83
SNHG3-201ENST00000413987 CNOT10Q9H9A5 744 aaKnown RBP9.86□□□□□ -0.83
SNHG3-201ENST00000413987 ETAA1Q9NY74 926 aa9.86□□□□□ -0.83
SNHG3-201ENST00000413987 SLC12A6Q9UHW9 1150 aa9.86□□□□□ -0.83
SNHG3-201ENST00000413987 TLR6Q9Y2C9 796 aa9.86□□□□□ -0.83
SNHG3-201ENST00000413987 CAPN6Q9Y6Q1 641 aa9.86□□□□□ -0.83
SNHG3-201ENST00000413987 GOLGA6L10A0A0M3HER8 536 aa9.85□□□□□ -0.83
SNHG3-201ENST00000413987 TBKBP1A7MCY6 615 aa9.85□□□□□ -0.83
SNHG3-201ENST00000413987 PI4K2BG5E9Z4 385 aa9.85□□□□□ -0.83
SNHG3-201ENST00000413987 PDHXO00330 501 aa9.85□□□□□ -0.83
SNHG3-201ENST00000413987 AP1G1O43747 822 aa9.85□□□□□ -0.83
SNHG3-201ENST00000413987 DOK2O60496 412 aa9.85□□□□□ -0.83
SNHG3-201ENST00000413987 CNMDO75829 334 aa9.85□□□□□ -0.83
SNHG3-201ENST00000413987 MOCS3O95396 460 aa9.85□□□□□ -0.83
SNHG3-201ENST00000413987 GNRH1P01148 92 aa9.85□□□□□ -0.83
SNHG3-201ENST00000413987 GLI1P08151 1106 aa9.85□□□□□ -0.83
SNHG3-201ENST00000413987 PPP1R2P41236 205 aa9.85□□□□□ -0.83
SNHG3-201ENST00000413987 TNNC1P63316 161 aa9.85□□□□□ -0.83
SNHG3-201ENST00000413987 CYP27A1Q02318 531 aa9.85□□□□□ -0.83
SNHG3-201ENST00000413987 FSTL1Q12841 308 aa9.85□□□□□ -0.83
SNHG3-201ENST00000413987 CUL1Q13616 776 aa9.85□□□□□ -0.83
SNHG3-201ENST00000413987 KCNB1Q14721 858 aa9.85□□□□□ -0.83
SNHG3-201ENST00000413987 CALCRLQ16602 461 aa9.85□□□□□ -0.83
SNHG3-201ENST00000413987 ANO4Q32M45 955 aa9.85□□□□□ -0.83
SNHG3-201ENST00000413987 FAM153CQ494X1 144 aa9.85□□□□□ -0.83
SNHG3-201ENST00000413987 SPRYD7Q5W111 196 aa9.85□□□□□ -0.83
SNHG3-201ENST00000413987 SHQ1Q6PI26 577 aaKnown RBP9.85□□□□□ -0.83
SNHG3-201ENST00000413987 ANGPTL8Q6UXH0 198 aa9.85□□□□□ -0.83
SNHG3-201ENST00000413987 LBX2Q6XYB7 198 aa9.85□□□□□ -0.83
SNHG3-201ENST00000413987 CPLX4Q7Z7G2 160 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms