RNA–Protein interactions for RNA: ENST00000412686.5

CPSF4-202, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-202ENST00000412686 OTOP3Q7RTS5 596 aa8.19□□□□□ -1.1
CPSF4-202ENST00000412686 GPRIN1Q7Z2K8 1008 aa8.19□□□□□ -1.1
CPSF4-202ENST00000412686 TMEM150AQ86TG1 271 aa8.19□□□□□ -1.1
CPSF4-202ENST00000412686 LUZP1Q86V48 1076 aa8.19□□□□□ -1.1
CPSF4-202ENST00000412686 TFAP2BQ92481 460 aa8.19□□□□□ -1.1
CPSF4-202ENST00000412686 CYFIP2Q96F07 1278 aa8.19□□□□□ -1.1
CPSF4-202ENST00000412686 HEXIM2Q96MH2 286 aaKnown RBP8.19□□□□□ -1.1
CPSF4-202ENST00000412686 SMOQ99835 787 aa8.19□□□□□ -1.1
CPSF4-202ENST00000412686 BPIFA3Q9BQP9 254 aa8.19□□□□□ -1.1
CPSF4-202ENST00000412686 LSM14BQ9BX40 385 aaKnown RBP8.19□□□□□ -1.1
CPSF4-202ENST00000412686 ATXN3LQ9H3M9 355 aa8.19□□□□□ -1.1
CPSF4-202ENST00000412686 CBX8Q9HC52 389 aa8.19□□□□□ -1.1
CPSF4-202ENST00000412686 UBE2TQ9NPD8 197 aaPredicted RBP8.19□□□□□ -1.1
CPSF4-202ENST00000412686 ACP6Q9NPH0 428 aa8.19□□□□□ -1.1
CPSF4-202ENST00000412686 CDH7Q9ULB5 785 aa8.19□□□□□ -1.1
CPSF4-202ENST00000412686 NR2E1Q9Y466 385 aa8.19□□□□□ -1.1
CPSF4-202ENST00000412686 ZNF638Q14966 1978 aaKnown RBP8.19□□□□□ -1.1
CPSF4-202ENST00000412686 COL4A3Q01955 1670 aa8.18□□□□□ -1.1
CPSF4-202ENST00000412686 GTPBP10A4D1E9 387 aaKnown RBP8.18□□□□□ -1.1
CPSF4-202ENST00000412686 BECN2A8MW95 431 aa8.18□□□□□ -1.1
CPSF4-202ENST00000412686 TULP2O00295 520 aa8.18□□□□□ -1.1
CPSF4-202ENST00000412686 TRIM66O15016 1216 aa8.18□□□□□ -1.1
CPSF4-202ENST00000412686 EPHB6O15197 1021 aa8.18□□□□□ -1.1
CPSF4-202ENST00000412686 LETM1O95202 739 aaPredicted RBP8.18□□□□□ -1.1
CPSF4-202ENST00000412686 F11P03951 625 aa8.18□□□□□ -1.1
CPSF4-202ENST00000412686 FAM200BP0CF97 657 aa8.18□□□□□ -1.1
CPSF4-202ENST00000412686 CSH1P0DML2 217 aa8.18□□□□□ -1.1
CPSF4-202ENST00000412686 CSH2P0DML3 217 aa8.18□□□□□ -1.1
CPSF4-202ENST00000412686 CD19P15391 556 aa8.18□□□□□ -1.1
CPSF4-202ENST00000412686 BRD2P25440 801 aaKnown RBP8.18□□□□□ -1.1
CPSF4-202ENST00000412686 ANXA13P27216 316 aa8.18□□□□□ -1.1
CPSF4-202ENST00000412686 MAP3K7CLP57077 242 aa8.18□□□□□ -1.1
CPSF4-202ENST00000412686 GCNT1Q02742 428 aa8.18□□□□□ -1.1
CPSF4-202ENST00000412686 TAF12Q16514 161 aa8.18□□□□□ -1.1
CPSF4-202ENST00000412686 GOLGA7BQ2TAP0 167 aa8.18□□□□□ -1.1
CPSF4-202ENST00000412686 SKOR2Q2VWA4 1001 aaPredicted RBP8.18□□□□□ -1.1
CPSF4-202ENST00000412686 GPR158Q5T848 1215 aa8.18□□□□□ -1.1
CPSF4-202ENST00000412686 CLEC20AQ6ZU45 233 aa8.18□□□□□ -1.1
CPSF4-202ENST00000412686 DENND5BQ6ZUT9 1274 aa8.18□□□□□ -1.1
CPSF4-202ENST00000412686 ITIH5Q86UX2 942 aa8.18□□□□□ -1.1
CPSF4-202ENST00000412686 TTC30AQ86WT1 665 aa8.18□□□□□ -1.1
CPSF4-202ENST00000412686 ZDHHC14Q8IZN3 488 aa8.18□□□□□ -1.1
CPSF4-202ENST00000412686 RBBP8NLQ8NC74 664 aaPredicted RBP8.18□□□□□ -1.1
CPSF4-202ENST00000412686 SCAMP5Q8TAC9 235 aa8.18□□□□□ -1.1
CPSF4-202ENST00000412686 FGF14Q92915 247 aa8.18□□□□□ -1.1
CPSF4-202ENST00000412686 ACSF2Q96CM8 615 aaPredicted RBP8.18□□□□□ -1.1
CPSF4-202ENST00000412686 SMARCD1Q96GM5 515 aa8.18□□□□□ -1.1
CPSF4-202ENST00000412686 FAXDC2Q96IV6 333 aa8.18□□□□□ -1.1
CPSF4-202ENST00000412686 C8orf48Q96LL4 319 aa8.18□□□□□ -1.1
CPSF4-202ENST00000412686 HNRNPABQ99729 332 aaKnown RBP8.18□□□□□ -1.1
CPSF4-202ENST00000412686 KXD1Q9BQD3 176 aa8.18□□□□□ -1.1
CPSF4-202ENST00000412686 PLA2G2FQ9BZM2 168 aa8.18□□□□□ -1.1
CPSF4-202ENST00000412686 NAT10Q9H0A0 1025 aaKnown RBP8.18□□□□□ -1.1
CPSF4-202ENST00000412686 SMG9Q9H0W8 520 aaKnown RBP8.18□□□□□ -1.1
CPSF4-202ENST00000412686 EPHX3Q9H6B9 360 aa8.18□□□□□ -1.1
CPSF4-202ENST00000412686 KCNK12Q9HB15 430 aa8.18□□□□□ -1.1
CPSF4-202ENST00000412686 DMAP1Q9NPF5 467 aaPredicted RBP8.18□□□□□ -1.1
CPSF4-202ENST00000412686 AVENQ9NQS1 362 aaPredicted RBP8.18□□□□□ -1.1
CPSF4-202ENST00000412686 EPS15L1Q9UBC2 864 aa8.18□□□□□ -1.1
CPSF4-202ENST00000412686 APEX2Q9UBZ4 518 aa8.18□□□□□ -1.1
CPSF4-202ENST00000412686 LIMA1Q9UHB6 759 aaKnown RBP8.18□□□□□ -1.1
CPSF4-202ENST00000412686 TSPAN16Q9UKR8 245 aa8.18□□□□□ -1.1
CPSF4-202ENST00000412686 ASB3Q9Y575 518 aa8.18□□□□□ -1.1
CPSF4-202ENST00000412686 FHOD1Q9Y613 1164 aa8.18□□□□□ -1.1
CPSF4-202ENST00000412686 NUMBLQ9Y6R0 609 aa8.18□□□□□ -1.1
CPSF4-202ENST00000412686 ANAPC1Q9H1A4 1944 aa8.18□□□□□ -1.1
CPSF4-202ENST00000412686 NUP210Q8TEM1 1887 aaPredicted RBP8.17□□□□□ -1.1
CPSF4-202ENST00000412686 C5orf42Q9H799 3197 aa8.17□□□□□ -1.1
CPSF4-202ENST00000412686 LGALS16A8MUM7 142 aa8.17□□□□□ -1.1
CPSF4-202ENST00000412686 HHLA1C9JL84 531 aa8.17□□□□□ -1.1
CPSF4-202ENST00000412686 TNFRSF10AO00220 468 aa8.17□□□□□ -1.1
CPSF4-202ENST00000412686 O00370 1275 aa8.17□□□□□ -1.1
CPSF4-202ENST00000412686 ZNF197O14709 1029 aa8.17□□□□□ -1.1
CPSF4-202ENST00000412686 TEX33O43247 280 aa8.17□□□□□ -1.1
CPSF4-202ENST00000412686 NARSO43776 548 aaKnown RBP8.17□□□□□ -1.1
CPSF4-202ENST00000412686 PRAMEF12O95522 483 aa8.17□□□□□ -1.1
CPSF4-202ENST00000412686 CFHP08603 1231 aa8.17□□□□□ -1.1
CPSF4-202ENST00000412686 KRT5P13647 590 aa8.17□□□□□ -1.1
CPSF4-202ENST00000412686 NPR3P17342 541 aa8.17□□□□□ -1.1
CPSF4-202ENST00000412686 CDK11BP21127 795 aaKnown RBP8.17□□□□□ -1.1
CPSF4-202ENST00000412686 FCARP24071 287 aa8.17□□□□□ -1.1
CPSF4-202ENST00000412686 USP8P40818 1118 aa8.17□□□□□ -1.1
CPSF4-202ENST00000412686 PGFP49763 221 aa8.17□□□□□ -1.1
CPSF4-202ENST00000412686 ZNF132P52740 706 aa8.17□□□□□ -1.1
CPSF4-202ENST00000412686 SLC5A3P53794 718 aa8.17□□□□□ -1.1
CPSF4-202ENST00000412686 YWHAEP62258 255 aaKnown RBP8.17□□□□□ -1.1
CPSF4-202ENST00000412686 TAF10Q12962 218 aa8.17□□□□□ -1.1
CPSF4-202ENST00000412686 HTR4Q13639 388 aa8.17□□□□□ -1.1
CPSF4-202ENST00000412686 FAM78AQ5JUQ0 283 aa8.17□□□□□ -1.1
CPSF4-202ENST00000412686 ARHGAP17Q68EM7 881 aa8.17□□□□□ -1.1
CPSF4-202ENST00000412686 TXNDC8Q6A555 127 aa8.17□□□□□ -1.1
CPSF4-202ENST00000412686 TANGO2Q6ICL3 276 aa8.17□□□□□ -1.1
CPSF4-202ENST00000412686 LEMD2Q8NC56 503 aa8.17□□□□□ -1.1
CPSF4-202ENST00000412686 UBA3Q8TBC4 463 aa8.17□□□□□ -1.1
CPSF4-202ENST00000412686 ZSCAN18Q8TBC5 510 aaPredicted RBP8.17□□□□□ -1.1
CPSF4-202ENST00000412686 RSPRY1Q96DX4 576 aa8.17□□□□□ -1.1
CPSF4-202ENST00000412686 SPATA17Q96L03 361 aa8.17□□□□□ -1.1
CPSF4-202ENST00000412686 SLC22A12Q96S37 553 aa8.17□□□□□ -1.1
CPSF4-202ENST00000412686 SLC46A2Q9BY10 475 aa8.17□□□□□ -1.1
CPSF4-202ENST00000412686 GPR88Q9GZN0 384 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms