RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 ATF2P15336 505 aa5.83□□□□□ -1.48
LINC00342-201ENST00000412393 PDCP20941 246 aa5.83□□□□□ -1.48
LINC00342-201ENST00000412393 SYT1P21579 422 aa5.83□□□□□ -1.48
LINC00342-201ENST00000412393 BMPR1AP36894 532 aa5.83□□□□□ -1.48
LINC00342-201ENST00000412393 ACVRL1P37023 503 aa5.83□□□□□ -1.48
LINC00342-201ENST00000412393 SARSP49591 514 aaKnown RBP5.83□□□□□ -1.48
LINC00342-201ENST00000412393 GATMP50440 423 aa5.83□□□□□ -1.48
LINC00342-201ENST00000412393 KCNQ1P51787 676 aa5.83□□□□□ -1.48
LINC00342-201ENST00000412393 NLRP11P59045 1033 aaKnown RBP5.83□□□□□ -1.48
LINC00342-201ENST00000412393 PSMC5P62195 406 aa5.83□□□□□ -1.48
LINC00342-201ENST00000412393 MVKQ03426 396 aa5.83□□□□□ -1.48
LINC00342-201ENST00000412393 DLX2Q07687 328 aaPredicted RBP5.83□□□□□ -1.48
LINC00342-201ENST00000412393 PPP2R5CQ13362 524 aa5.83□□□□□ -1.48
LINC00342-201ENST00000412393 PWP1Q13610 501 aa5.83□□□□□ -1.48
LINC00342-201ENST00000412393 TRIM29Q14134 588 aa5.83□□□□□ -1.48
LINC00342-201ENST00000412393 PAN2Q504Q3 1202 aaKnown RBP5.83□□□□□ -1.48
LINC00342-201ENST00000412393 EARS2Q5JPH6 523 aaKnown RBP5.83□□□□□ -1.48
LINC00342-201ENST00000412393 ATL3Q6DD88 541 aa5.83□□□□□ -1.48
LINC00342-201ENST00000412393 PPP4R3AQ6IN85 833 aa5.83□□□□□ -1.48
LINC00342-201ENST00000412393 SLC24A5Q71RS6 500 aa5.83□□□□□ -1.48
LINC00342-201ENST00000412393 FAM228AQ86W67 206 aa5.83□□□□□ -1.48
LINC00342-201ENST00000412393 CMTR2Q8IYT2 770 aaKnown RBP5.83□□□□□ -1.48
LINC00342-201ENST00000412393 ADGRG2Q8IZP9 1017 aa5.83□□□□□ -1.48
LINC00342-201ENST00000412393 KRT222Q8N1A0 295 aa5.83□□□□□ -1.48
LINC00342-201ENST00000412393 LINC01465Q8N7H1 131 aa5.83□□□□□ -1.48
LINC00342-201ENST00000412393 NSUN7Q8NE18 718 aaKnown RBP5.83□□□□□ -1.48
LINC00342-201ENST00000412393 ZNF397Q8NF99 534 aaPredicted RBP5.83□□□□□ -1.48
LINC00342-201ENST00000412393 ZNF668Q96K58 619 aaPredicted RBP5.83□□□□□ -1.48
LINC00342-201ENST00000412393 SCLT1Q96NL6 688 aa5.83□□□□□ -1.48
LINC00342-201ENST00000412393 JMJD8Q96S16 334 aa5.83□□□□□ -1.48
LINC00342-201ENST00000412393 C11orf84Q9BUA3 381 aaPredicted RBP5.83□□□□□ -1.48
LINC00342-201ENST00000412393 PRDM14Q9GZV8 571 aa5.83□□□□□ -1.48
LINC00342-201ENST00000412393 SCAND2PQ9GZW5 306 aaPredicted RBP5.83□□□□□ -1.48
LINC00342-201ENST00000412393 LMAN2LQ9H0V9 348 aa5.83□□□□□ -1.48
LINC00342-201ENST00000412393 UBE2ZQ9H832 354 aaPredicted RBP5.83□□□□□ -1.48
LINC00342-201ENST00000412393 L2HGDHQ9H9P8 463 aa5.83□□□□□ -1.48
LINC00342-201ENST00000412393 KCNMB3Q9NPA1 279 aa5.83□□□□□ -1.48
LINC00342-201ENST00000412393 RGS18Q9NS28 235 aa5.83□□□□□ -1.48
LINC00342-201ENST00000412393 C1orf112Q9NSG2 853 aa5.83□□□□□ -1.48
LINC00342-201ENST00000412393 DDX19AQ9NUU7 478 aaKnown RBP5.83□□□□□ -1.48
LINC00342-201ENST00000412393 POLR3KQ9Y2Y1 108 aaPredicted RBP5.83□□□□□ -1.48
LINC00342-201ENST00000412393 PCDHB7Q9Y5E2 793 aa5.83□□□□□ -1.48
LINC00342-201ENST00000412393 MRPL42Q9Y6G3 142 aaKnown RBP5.83□□□□□ -1.48
LINC00342-201ENST00000412393 TTC28Q96AY4 2481 aa5.83□□□□□ -1.48
LINC00342-201ENST00000412393 TDRD15B5MCY1 1934 aaKnown RBP5.82□□□□□ -1.48
LINC00342-201ENST00000412393 TMEM150BA6NC51 233 aa5.82□□□□□ -1.48
LINC00342-201ENST00000412393 C9IYK1 514 aa5.82□□□□□ -1.48
LINC00342-201ENST00000412393 GRM6O15303 877 aa5.82□□□□□ -1.48
LINC00342-201ENST00000412393 DNAJA2O60884 412 aa5.82□□□□□ -1.48
LINC00342-201ENST00000412393 FZD7O75084 574 aa5.82□□□□□ -1.48
LINC00342-201ENST00000412393 MAFO75444 373 aaPredicted RBP5.82□□□□□ -1.48
LINC00342-201ENST00000412393 MMP1P03956 469 aa5.82□□□□□ -1.48
LINC00342-201ENST00000412393 LINC00271P0C7V0 271 aa5.82□□□□□ -1.48
LINC00342-201ENST00000412393 VAV1P15498 845 aa5.82□□□□□ -1.48
LINC00342-201ENST00000412393 QARSP47897 775 aaKnown RBP5.82□□□□□ -1.48
LINC00342-201ENST00000412393 DNM2P50570 870 aa5.82□□□□□ -1.48
LINC00342-201ENST00000412393 GPC3P51654 580 aa5.82□□□□□ -1.48
LINC00342-201ENST00000412393 ZNF75DP51815 510 aa5.82□□□□□ -1.48
LINC00342-201ENST00000412393 CDC42EP1Q00587 391 aa5.82□□□□□ -1.48
LINC00342-201ENST00000412393 ST3GAL1Q11201 340 aa5.82□□□□□ -1.48
LINC00342-201ENST00000412393 DRP2Q13474 957 aa5.82□□□□□ -1.48
LINC00342-201ENST00000412393 SNW1Q13573 536 aaKnown RBP5.82□□□□□ -1.48
LINC00342-201ENST00000412393 EPHA7Q15375 998 aa5.82□□□□□ -1.48
LINC00342-201ENST00000412393 TCEAL5Q5H9L2 206 aa5.82□□□□□ -1.48
LINC00342-201ENST00000412393 PLA2G4FQ68DD2 849 aa5.82□□□□□ -1.48
LINC00342-201ENST00000412393 NCAPH2Q6IBW4 605 aa5.82□□□□□ -1.48
LINC00342-201ENST00000412393 CYP2R1Q6VVX0 501 aa5.82□□□□□ -1.48
LINC00342-201ENST00000412393 REC114Q7Z4M0 266 aa5.82□□□□□ -1.48
LINC00342-201ENST00000412393 CCDC83Q8IWF9 413 aa5.82□□□□□ -1.48
LINC00342-201ENST00000412393 DIS3L2Q8IYB7 885 aaKnown RBP5.82□□□□□ -1.48
LINC00342-201ENST00000412393 HAS1Q92839 578 aa5.82□□□□□ -1.48
LINC00342-201ENST00000412393 TIGD1Q96MW7 591 aa5.82□□□□□ -1.48
LINC00342-201ENST00000412393 UHRF1Q96T88 793 aaPredicted RBP5.82□□□□□ -1.48
LINC00342-201ENST00000412393 JPH2Q9BR39 696 aaPredicted RBP5.82□□□□□ -1.48
LINC00342-201ENST00000412393 SH2D3AQ9BRG2 576 aa5.82□□□□□ -1.48
LINC00342-201ENST00000412393 UBXN6Q9BZV1 441 aa5.82□□□□□ -1.48
LINC00342-201ENST00000412393 ATP6V0A4Q9HBG4 840 aa5.82□□□□□ -1.48
LINC00342-201ENST00000412393 ALG13Q9NP73 1137 aaKnown RBP5.82□□□□□ -1.48
LINC00342-201ENST00000412393 TMEM161AQ9NX61 479 aa5.82□□□□□ -1.48
LINC00342-201ENST00000412393 GMIPQ9P107 970 aa5.82□□□□□ -1.48
LINC00342-201ENST00000412393 PYCARDQ9ULZ3 195 aa5.82□□□□□ -1.48
LINC00342-201ENST00000412393 MTMR6Q9Y217 621 aa5.82□□□□□ -1.48
LINC00342-201ENST00000412393 MYH11P35749 1972 aa5.81□□□□□ -1.48
LINC00342-201ENST00000412393 A0A087WZ62 844 aa5.81□□□□□ -1.48
LINC00342-201ENST00000412393 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.81□□□□□ -1.48
LINC00342-201ENST00000412393 IGKV6-21A0A0C4DH24 114 aa5.81□□□□□ -1.48
LINC00342-201ENST00000412393 TBKBP1A7MCY6 615 aa5.81□□□□□ -1.48
LINC00342-201ENST00000412393 BTBD18B2RXH4 712 aa5.81□□□□□ -1.48
LINC00342-201ENST00000412393 CLEC3AO75596 197 aa5.81□□□□□ -1.48
LINC00342-201ENST00000412393 CSPG5O95196 566 aa5.81□□□□□ -1.48
LINC00342-201ENST00000412393 ITGB1P05556 798 aa5.81□□□□□ -1.48
LINC00342-201ENST00000412393 GSNP06396 782 aa5.81□□□□□ -1.48
LINC00342-201ENST00000412393 DARSP14868 501 aaKnown RBP5.81□□□□□ -1.48
LINC00342-201ENST00000412393 H2AFXP16104 143 aaPredicted RBP5.81□□□□□ -1.48
LINC00342-201ENST00000412393 FGFR4P22455 802 aa5.81□□□□□ -1.48
LINC00342-201ENST00000412393 KCNA5P22460 613 aa5.81□□□□□ -1.48
LINC00342-201ENST00000412393 U2AF2P26368 475 aaKnown RBP eCLIP5.81□□□□□ -1.48
LINC00342-201ENST00000412393 NPEPPSP55786 919 aa5.81□□□□□ -1.48
LINC00342-201ENST00000412393 FAM189BP81408 668 aa5.81□□□□□ -1.48
LINC00342-201ENST00000412393 GUCY1B3Q02153 619 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms