RNA–Protein interactions for RNA: ENST00000411796.6

CCDC196-203, Transcript of coiled-coil domain containing 196, humanhuman

TSL 1 (best)

Gene CCDC196, Length 1,132 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196-203ENST00000411796 SMARCB1Q12824 385 aa9.16□□□□□ -0.94
CCDC196-203ENST00000411796 TRPC3Q13507 836 aa9.16□□□□□ -0.94
CCDC196-203ENST00000411796 NAB2Q15742 525 aa9.16□□□□□ -0.94
CCDC196-203ENST00000411796 MEA1Q16626 185 aa9.16□□□□□ -0.94
CCDC196-203ENST00000411796 UPP1Q16831 310 aa9.16□□□□□ -0.94
CCDC196-203ENST00000411796 EPC2Q52LR7 807 aa9.16□□□□□ -0.94
CCDC196-203ENST00000411796 SPECC1LQ69YQ0 1117 aa9.16□□□□□ -0.94
CCDC196-203ENST00000411796 PPP1R2P3Q6NXS1 205 aa9.16□□□□□ -0.94
CCDC196-203ENST00000411796 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.16□□□□□ -0.94
CCDC196-203ENST00000411796 AGGF1Q8N302 714 aaeCLIP9.16□□□□□ -0.94
CCDC196-203ENST00000411796 LMO3Q8TAP4 145 aa9.16□□□□□ -0.94
CCDC196-203ENST00000411796 CXorf38Q8TB03 319 aa9.16□□□□□ -0.94
CCDC196-203ENST00000411796 MRRFQ96E11 262 aaKnown RBP9.16□□□□□ -0.94
CCDC196-203ENST00000411796 SCLYQ96I15 445 aa9.16□□□□□ -0.94
CCDC196-203ENST00000411796 CEP295NLQ96MC4 621 aa9.16□□□□□ -0.94
CCDC196-203ENST00000411796 ZNF560Q96MR9 790 aa9.16□□□□□ -0.94
CCDC196-203ENST00000411796 CASD1Q96PB1 797 aa9.16□□□□□ -0.94
CCDC196-203ENST00000411796 FAM193BQ96PV7 902 aaPredicted RBP9.16□□□□□ -0.94
CCDC196-203ENST00000411796 STK33Q9BYT3 514 aa9.16□□□□□ -0.94
CCDC196-203ENST00000411796 AKTIPQ9H8T0 292 aa9.16□□□□□ -0.94
CCDC196-203ENST00000411796 RC3H2Q9HBD1 1191 aaKnown RBP9.16□□□□□ -0.94
CCDC196-203ENST00000411796 PDE11AQ9HCR9 933 aa9.16□□□□□ -0.94
CCDC196-203ENST00000411796 PRDM5Q9NQX1 630 aaPredicted RBP9.16□□□□□ -0.94
CCDC196-203ENST00000411796 DPP3Q9NY33 737 aa9.16□□□□□ -0.94
CCDC196-203ENST00000411796 FAM8A1Q9UBU6 413 aa9.16□□□□□ -0.94
CCDC196-203ENST00000411796 LZTS1Q9Y250 596 aa9.16□□□□□ -0.94
CCDC196-203ENST00000411796 SLC4A7Q9Y6M7 1214 aa9.16□□□□□ -0.94
CCDC196-203ENST00000411796 GOLGA6L6A8MZA4 724 aa9.15□□□□□ -0.94
CCDC196-203ENST00000411796 PTGESO14684 152 aa9.15□□□□□ -0.94
CCDC196-203ENST00000411796 MSTNO14793 375 aa9.15□□□□□ -0.94
CCDC196-203ENST00000411796 SYN3O14994 580 aa9.15□□□□□ -0.94
CCDC196-203ENST00000411796 DLGAP3O95886 979 aa9.15□□□□□ -0.94
CCDC196-203ENST00000411796 CYP11A1P05108 521 aa9.15□□□□□ -0.94
CCDC196-203ENST00000411796 TPM1P09493 284 aa9.15□□□□□ -0.94
CCDC196-203ENST00000411796 USP17L7P0C7H9 530 aa9.15□□□□□ -0.94
CCDC196-203ENST00000411796 TYMPP19971 482 aa9.15□□□□□ -0.94
CCDC196-203ENST00000411796 PON1P27169 355 aa9.15□□□□□ -0.94
CCDC196-203ENST00000411796 HNRNPH3P31942 346 aaKnown RBP9.15□□□□□ -0.94
CCDC196-203ENST00000411796 PPM1AP35813 382 aa9.15□□□□□ -0.94
CCDC196-203ENST00000411796 TNFSF9P41273 254 aa9.15□□□□□ -0.94
CCDC196-203ENST00000411796 ALDH7A1P49419 539 aaKnown RBP9.15□□□□□ -0.94
CCDC196-203ENST00000411796 MFAP3P55082 362 aa9.15□□□□□ -0.94
CCDC196-203ENST00000411796 CDK17Q00537 523 aa9.15□□□□□ -0.94
CCDC196-203ENST00000411796 UBE3AQ05086 875 aa9.15□□□□□ -0.94
CCDC196-203ENST00000411796 PPP3CAQ08209 521 aa9.15□□□□□ -0.94
CCDC196-203ENST00000411796 BMS1Q14692 1282 aaKnown RBP9.15□□□□□ -0.94
CCDC196-203ENST00000411796 TCERG1LQ5VWI1 586 aa9.15□□□□□ -0.94
CCDC196-203ENST00000411796 C9orf57Q5W0N0 161 aa9.15□□□□□ -0.94
CCDC196-203ENST00000411796 ACAD11Q709F0 780 aa9.15□□□□□ -0.94
CCDC196-203ENST00000411796 ZNF365Q70YC5 407 aa9.15□□□□□ -0.94
CCDC196-203ENST00000411796 UNC93AQ86WB7 457 aa9.15□□□□□ -0.94
CCDC196-203ENST00000411796 LRRC43Q8N309 656 aa9.15□□□□□ -0.94
CCDC196-203ENST00000411796 TOP6BLQ8N6T0 577 aa9.15□□□□□ -0.94
CCDC196-203ENST00000411796 LINC01599Q8WXQ3 324 aa9.15□□□□□ -0.94
CCDC196-203ENST00000411796 CCDC127Q96BQ5 260 aa9.15□□□□□ -0.94
CCDC196-203ENST00000411796 SAAL1Q96ER3 474 aa9.15□□□□□ -0.94
CCDC196-203ENST00000411796 ZNF668Q96K58 619 aaPredicted RBP9.15□□□□□ -0.94
CCDC196-203ENST00000411796 NAP1L5Q96NT1 182 aaPredicted RBP9.15□□□□□ -0.94
CCDC196-203ENST00000411796 TRIM56Q9BRZ2 755 aaKnown RBP9.15□□□□□ -0.94
CCDC196-203ENST00000411796 TRIM5Q9C035 493 aa9.15□□□□□ -0.94
CCDC196-203ENST00000411796 NRSN2Q9GZP1 204 aa9.15□□□□□ -0.94
CCDC196-203ENST00000411796 NXF3Q9H4D5 531 aaKnown RBP9.15□□□□□ -0.94
CCDC196-203ENST00000411796 TMEM51Q9NW97 253 aa9.15□□□□□ -0.94
CCDC196-203ENST00000411796 CEP72Q9P209 647 aa9.15□□□□□ -0.94
CCDC196-203ENST00000411796 APEX2Q9UBZ4 518 aa9.15□□□□□ -0.94
CCDC196-203ENST00000411796 CAPN11Q9UMQ6 739 aa9.15□□□□□ -0.94
CCDC196-203ENST00000411796 TTC3P53804 2025 aa9.14□□□□□ -0.95
CCDC196-203ENST00000411796 COL4A6Q14031 1691 aa9.14□□□□□ -0.95
CCDC196-203ENST00000411796 GOLGA8IPA6NC78 632 aa9.14□□□□□ -0.95
CCDC196-203ENST00000411796 GOLGA8JA6NMD2 632 aa9.14□□□□□ -0.95
CCDC196-203ENST00000411796 TISP43B9A030 160 aa9.14□□□□□ -0.95
CCDC196-203ENST00000411796 M0QZQ0 153 aa9.14□□□□□ -0.95
CCDC196-203ENST00000411796 GFPT2O94808 682 aa9.14□□□□□ -0.95
CCDC196-203ENST00000411796 EFEMP2O95967 443 aa9.14□□□□□ -0.95
CCDC196-203ENST00000411796 CST3P01034 146 aaPredicted RBP9.14□□□□□ -0.95
CCDC196-203ENST00000411796 CXCL8P10145 99 aa9.14□□□□□ -0.95
CCDC196-203ENST00000411796 DLATP10515 647 aaKnown RBP9.14□□□□□ -0.95
CCDC196-203ENST00000411796 ATP1A3P13637 1013 aa9.14□□□□□ -0.95
CCDC196-203ENST00000411796 LAG3P18627 525 aa9.14□□□□□ -0.95
CCDC196-203ENST00000411796 LHX1P48742 406 aa9.14□□□□□ -0.95
CCDC196-203ENST00000411796 GSDMDP57764 484 aa9.14□□□□□ -0.95
CCDC196-203ENST00000411796 LILRA4P59901 499 aa9.14□□□□□ -0.95
CCDC196-203ENST00000411796 STILQ15468 1287 aa9.14□□□□□ -0.95
CCDC196-203ENST00000411796 SV2CQ496J9 727 aa9.14□□□□□ -0.95
CCDC196-203ENST00000411796 KLHDC7AQ5VTJ3 777 aa9.14□□□□□ -0.95
CCDC196-203ENST00000411796 JADE1Q6IE81 842 aa9.14□□□□□ -0.95
CCDC196-203ENST00000411796 TRIM65Q6PJ69 517 aa9.14□□□□□ -0.95
CCDC196-203ENST00000411796 DEFB128Q7Z7B8 93 aa9.14□□□□□ -0.95
CCDC196-203ENST00000411796 ZNF677Q86XU0 584 aa9.14□□□□□ -0.95
CCDC196-203ENST00000411796 VSTM4Q8IW00 320 aa9.14□□□□□ -0.95
CCDC196-203ENST00000411796 COLGALT2Q8IYK4 626 aa9.14□□□□□ -0.95
CCDC196-203ENST00000411796 C7orf61Q8IZ16 206 aa9.14□□□□□ -0.95
CCDC196-203ENST00000411796 APPL2Q8NEU8 664 aa9.14□□□□□ -0.95
CCDC196-203ENST00000411796 PPP1R13LQ8WUF5 828 aa9.14□□□□□ -0.95
CCDC196-203ENST00000411796 PDLIM2Q96JY6 352 aa9.14□□□□□ -0.95
CCDC196-203ENST00000411796 ZMAT2Q96NC0 199 aaKnown RBP9.14□□□□□ -0.95
CCDC196-203ENST00000411796 NT5C1BQ96P26 610 aa9.14□□□□□ -0.95
CCDC196-203ENST00000411796 PPP1R16BQ96T49 567 aa9.14□□□□□ -0.95
CCDC196-203ENST00000411796 GAD1Q99259 594 aa9.14□□□□□ -0.95
CCDC196-203ENST00000411796 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms