RNA–Protein interactions for RNA: ENST00000410569.1

RNU4-25P-201, Transcript of RNA, U4 small nuclear 25, pseudogene, humanhuman

BASIC

Gene RNU4-25P, Length 230 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-25P-201ENST00000410569 CSRP2Q16527 193 aa4.96□□□□□ -1.62
RNU4-25P-201ENST00000410569 TSNAXIP1Q2TAA8 658 aa4.96□□□□□ -1.62
RNU4-25P-201ENST00000410569 ADCK5Q3MIX3 580 aa4.96□□□□□ -1.62
RNU4-25P-201ENST00000410569 PABPC1LQ4VXU2 614 aaKnown RBP4.96□□□□□ -1.62
RNU4-25P-201ENST00000410569 PPM1LQ5SGD2 360 aa4.96□□□□□ -1.62
RNU4-25P-201ENST00000410569 N4BP2L1Q5TBK1 243 aaPredicted RBP4.96□□□□□ -1.62
RNU4-25P-201ENST00000410569 PRAMEF13Q5VWM6 474 aa4.96□□□□□ -1.62
RNU4-25P-201ENST00000410569 SRGAP1Q7Z6B7 1085 aa4.96□□□□□ -1.62
RNU4-25P-201ENST00000410569 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.96□□□□□ -1.62
RNU4-25P-201ENST00000410569 CDR2LQ86X02 465 aaPredicted RBP4.96□□□□□ -1.62
RNU4-25P-201ENST00000410569 MRPL41Q8IXM3 137 aaKnown RBP4.96□□□□□ -1.62
RNU4-25P-201ENST00000410569 MFSD4AQ8N468 514 aa4.96□□□□□ -1.62
RNU4-25P-201ENST00000410569 RNF149Q8NC42 400 aa4.96□□□□□ -1.62
RNU4-25P-201ENST00000410569 RIN3Q8TB24 985 aa4.96□□□□□ -1.62
RNU4-25P-201ENST00000410569 LNX1Q8TBB1 728 aaPredicted RBP4.96□□□□□ -1.62
RNU4-25P-201ENST00000410569 ETNPPLQ8TBG4 499 aa4.96□□□□□ -1.62
RNU4-25P-201ENST00000410569 PRPF31Q8WWY3 499 aaKnown RBP4.96□□□□□ -1.62
RNU4-25P-201ENST00000410569 DNASE1L2Q92874 299 aa4.96□□□□□ -1.62
RNU4-25P-201ENST00000410569 CLSTN3Q9BQT9 956 aa4.96□□□□□ -1.62
RNU4-25P-201ENST00000410569 COLEC11Q9BWP8 271 aa4.96□□□□□ -1.62
RNU4-25P-201ENST00000410569 FAM126AQ9BYI3 521 aaPredicted RBP4.96□□□□□ -1.62
RNU4-25P-201ENST00000410569 MIR1-1HGQ9H1L0 117 aa4.96□□□□□ -1.62
RNU4-25P-201ENST00000410569 CXCL16Q9H2A7 254 aa4.96□□□□□ -1.62
RNU4-25P-201ENST00000410569 DHX33Q9H6R0 707 aaKnown RBP4.96□□□□□ -1.62
RNU4-25P-201ENST00000410569 C6orf50Q9HD87 102 aa4.96□□□□□ -1.62
RNU4-25P-201ENST00000410569 SEMA3GQ9NS98 782 aa4.96□□□□□ -1.62
RNU4-25P-201ENST00000410569 RXFP3Q9NSD7 469 aa4.96□□□□□ -1.62
RNU4-25P-201ENST00000410569 VPS54Q9P1Q0 977 aa4.96□□□□□ -1.62
RNU4-25P-201ENST00000410569 DNMT3BQ9UBC3 853 aaKnown RBP4.96□□□□□ -1.62
RNU4-25P-201ENST00000410569 RAB23Q9ULC3 237 aa4.96□□□□□ -1.62
RNU4-25P-201ENST00000410569 TPX2Q9ULW0 747 aaKnown RBP4.96□□□□□ -1.62
RNU4-25P-201ENST00000410569 CAPN6Q9Y6Q1 641 aa4.96□□□□□ -1.62
RNU4-25P-201ENST00000410569 ZZEF1O43149 2961 aa4.96□□□□□ -1.62
RNU4-25P-201ENST00000410569 LAMA1P25391 3075 aa4.95□□□□□ -1.62
RNU4-25P-201ENST00000410569 ZMYM2Q9UBW7 1377 aa4.95□□□□□ -1.62
RNU4-25P-201ENST00000410569 OBSL1O75147 1896 aa4.95□□□□□ -1.62
RNU4-25P-201ENST00000410569 CHURC1-FNTBB4DL54 471 aa4.95□□□□□ -1.62
RNU4-25P-201ENST00000410569 K7ESF4 209 aa4.95□□□□□ -1.62
RNU4-25P-201ENST00000410569 PTGESO14684 152 aa4.95□□□□□ -1.62
RNU4-25P-201ENST00000410569 NCAM2O15394 837 aa4.95□□□□□ -1.62
RNU4-25P-201ENST00000410569 B4GALT5O43286 388 aa4.95□□□□□ -1.62
RNU4-25P-201ENST00000410569 EPB41L2O43491 1005 aaKnown RBP4.95□□□□□ -1.62
RNU4-25P-201ENST00000410569 SLC37A4O43826 429 aa4.95□□□□□ -1.62
RNU4-25P-201ENST00000410569 ECI2O75521 394 aa4.95□□□□□ -1.62
RNU4-25P-201ENST00000410569 NPTXRO95502 500 aa4.95□□□□□ -1.62
RNU4-25P-201ENST00000410569 RHOP08100 348 aa4.95□□□□□ -1.62
RNU4-25P-201ENST00000410569 C1QTNF9P0C862 333 aa4.95□□□□□ -1.62
RNU4-25P-201ENST00000410569 ARF4P18085 180 aaPredicted RBP4.95□□□□□ -1.62
RNU4-25P-201ENST00000410569 IGFBP6P24592 240 aaPredicted RBP4.95□□□□□ -1.62
RNU4-25P-201ENST00000410569 FNTBP49356 437 aa4.95□□□□□ -1.62
RNU4-25P-201ENST00000410569 CCR3P51677 355 aa4.95□□□□□ -1.62
RNU4-25P-201ENST00000410569 RCAN1P53805 252 aa4.95□□□□□ -1.62
RNU4-25P-201ENST00000410569 PSMC5P62195 406 aa4.95□□□□□ -1.62
RNU4-25P-201ENST00000410569 EXOSC10Q01780 885 aaKnown RBP4.95□□□□□ -1.62
RNU4-25P-201ENST00000410569 RPL6Q02878 288 aaKnown RBP4.95□□□□□ -1.62
RNU4-25P-201ENST00000410569 MBTD1Q05BQ5 628 aa4.95□□□□□ -1.62
RNU4-25P-201ENST00000410569 CAPSQ13938 189 aa4.95□□□□□ -1.62
RNU4-25P-201ENST00000410569 SIM2Q14190 667 aaPredicted RBP4.95□□□□□ -1.62
RNU4-25P-201ENST00000410569 HSP90AA2PQ14568 343 aaPredicted RBP4.95□□□□□ -1.62
RNU4-25P-201ENST00000410569 EMC2Q15006 297 aa4.95□□□□□ -1.62
RNU4-25P-201ENST00000410569 ACAP1Q15027 740 aa4.95□□□□□ -1.62
RNU4-25P-201ENST00000410569 SF3A2Q15428 464 aaKnown RBP4.95□□□□□ -1.62
RNU4-25P-201ENST00000410569 CCDC6Q16204 474 aa4.95□□□□□ -1.62
RNU4-25P-201ENST00000410569 Q4G0T1 1027 aa4.95□□□□□ -1.62
RNU4-25P-201ENST00000410569 AXDND1Q5T1B0 1012 aaPredicted RBP4.95□□□□□ -1.62
RNU4-25P-201ENST00000410569 FAM171A1Q5VUB5 890 aa4.95□□□□□ -1.62
RNU4-25P-201ENST00000410569 TANGO2Q6ICL3 276 aa4.95□□□□□ -1.62
RNU4-25P-201ENST00000410569 NOTUMQ6P988 496 aa4.95□□□□□ -1.62
RNU4-25P-201ENST00000410569 VITQ6UXI7 678 aa4.95□□□□□ -1.62
RNU4-25P-201ENST00000410569 ZNF852Q6ZMS4 543 aa4.95□□□□□ -1.62
RNU4-25P-201ENST00000410569 Q6ZS52 159 aa4.95□□□□□ -1.62
RNU4-25P-201ENST00000410569 FERMT3Q86UX7 667 aa4.95□□□□□ -1.62
RNU4-25P-201ENST00000410569 CEP57Q86XR8 500 aa4.95□□□□□ -1.62
RNU4-25P-201ENST00000410569 CELF5Q8N6W0 485 aaKnown RBP4.95□□□□□ -1.62
RNU4-25P-201ENST00000410569 PHC3Q8NDX5 983 aa4.95□□□□□ -1.62
RNU4-25P-201ENST00000410569 CNNM3Q8NE01 707 aa4.95□□□□□ -1.62
RNU4-25P-201ENST00000410569 TBCKQ8TEA7 893 aa4.95□□□□□ -1.62
RNU4-25P-201ENST00000410569 CCDC12Q8WUD4 166 aaPredicted RBP4.95□□□□□ -1.62
RNU4-25P-201ENST00000410569 FAM168AQ92567 244 aa4.95□□□□□ -1.62
RNU4-25P-201ENST00000410569 CCDC51Q96ER9 411 aa4.95□□□□□ -1.62
RNU4-25P-201ENST00000410569 MCRS1Q96EZ8 462 aa4.95□□□□□ -1.62
RNU4-25P-201ENST00000410569 COX4I2Q96KJ9 171 aa4.95□□□□□ -1.62
RNU4-25P-201ENST00000410569 CEP170P1Q96L14 293 aa4.95□□□□□ -1.62
RNU4-25P-201ENST00000410569 HSPA12BQ96MM6 686 aa4.95□□□□□ -1.62
RNU4-25P-201ENST00000410569 JPH2Q9BR39 696 aaPredicted RBP4.95□□□□□ -1.62
RNU4-25P-201ENST00000410569 IER2Q9BTL4 223 aa4.95□□□□□ -1.62
RNU4-25P-201ENST00000410569 TTPALQ9BTX7 342 aa4.95□□□□□ -1.62
RNU4-25P-201ENST00000410569 CSRNP2Q9H175 543 aa4.95□□□□□ -1.62
RNU4-25P-201ENST00000410569 UBN1Q9NPG3 1134 aa4.95□□□□□ -1.62
RNU4-25P-201ENST00000410569 PRDM7Q9NQW5 492 aa4.95□□□□□ -1.62
RNU4-25P-201ENST00000410569 XPNPEP1Q9NQW7 623 aa4.95□□□□□ -1.62
RNU4-25P-201ENST00000410569 RBM12Q9NTZ6 932 aaKnown RBP4.95□□□□□ -1.62
RNU4-25P-201ENST00000410569 C2orf42Q9NWW7 574 aa4.95□□□□□ -1.62
RNU4-25P-201ENST00000410569 TJP2Q9UDY2 1190 aa4.95□□□□□ -1.62
RNU4-25P-201ENST00000410569 KCNH3Q9ULD8 1083 aa4.95□□□□□ -1.62
RNU4-25P-201ENST00000410569 NAP1L2Q9ULW6 460 aaPredicted RBP4.95□□□□□ -1.62
RNU4-25P-201ENST00000410569 GIT1Q9Y2X7 761 aa4.95□□□□□ -1.62
RNU4-25P-201ENST00000410569 MRPS23Q9Y3D9 190 aaKnown RBP4.95□□□□□ -1.62
RNU4-25P-201ENST00000410569 ST14Q9Y5Y6 855 aa4.95□□□□□ -1.62
RNU4-25P-201ENST00000410569 TNRC6BQ9UPQ9 1833 aaKnown RBP4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms