RNA–Protein interactions for RNA: ENST00000408454.1

SNORD88B-201, Transcript of small nucleolar RNA, C/D box 88B, humanhuman

BASIC

Gene SNORD88B, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88B-201ENST00000408454 GTSE1Q9NYZ3 720 aa13.68□□□□□ -0.22
SNORD88B-201ENST00000408454 SERTAD1Q9UHV2 236 aa13.68□□□□□ -0.22
SNORD88B-201ENST00000408454 CDV3Q9UKY7 258 aaKnown RBP13.68□□□□□ -0.22
SNORD88B-201ENST00000408454 TRAF3IP3Q9Y228 551 aa13.68□□□□□ -0.22
SNORD88B-201ENST00000408454 MTF2Q9Y483 593 aaPredicted RBP13.68□□□□□ -0.22
SNORD88B-201ENST00000408454 CHURC1-FNTBB4DL54 471 aa13.67□□□□□ -0.22
SNORD88B-201ENST00000408454 ACTN4O43707 911 aaKnown RBP13.67□□□□□ -0.22
SNORD88B-201ENST00000408454 LRRN2O75325 713 aa13.67□□□□□ -0.22
SNORD88B-201ENST00000408454 ALDH1A2O94788 518 aa13.67□□□□□ -0.22
SNORD88B-201ENST00000408454 RHOBTB3O94955 611 aa13.67□□□□□ -0.22
SNORD88B-201ENST00000408454 PDGFRBP09619 1106 aa13.67□□□□□ -0.22
SNORD88B-201ENST00000408454 PIK3CAP42336 1068 aa13.67□□□□□ -0.22
SNORD88B-201ENST00000408454 DPP6P42658 865 aa13.67□□□□□ -0.22
SNORD88B-201ENST00000408454 PSEN1P49768 467 aa13.67□□□□□ -0.22
SNORD88B-201ENST00000408454 PSMC1P62191 440 aaKnown RBP13.67□□□□□ -0.22
SNORD88B-201ENST00000408454 YWHAEP62258 255 aaKnown RBP13.67□□□□□ -0.22
SNORD88B-201ENST00000408454 USP4Q13107 963 aa13.67□□□□□ -0.22
SNORD88B-201ENST00000408454 BYSLQ13895 437 aaKnown RBP13.67□□□□□ -0.22
SNORD88B-201ENST00000408454 CCINQ13939 588 aa13.67□□□□□ -0.22
SNORD88B-201ENST00000408454 PON2Q15165 354 aa13.67□□□□□ -0.22
SNORD88B-201ENST00000408454 KMT5BQ4FZB7 885 aa13.67□□□□□ -0.22
SNORD88B-201ENST00000408454 TMEM196Q5HYL7 178 aa13.67□□□□□ -0.22
SNORD88B-201ENST00000408454 TRMT11Q7Z4G4 463 aaKnown RBP13.67□□□□□ -0.22
SNORD88B-201ENST00000408454 KBTBD7Q8WVZ9 684 aa13.67□□□□□ -0.22
SNORD88B-201ENST00000408454 CD101Q93033 1021 aa13.67□□□□□ -0.22
SNORD88B-201ENST00000408454 PNPLA8Q9NP80 782 aa13.67□□□□□ -0.22
SNORD88B-201ENST00000408454 NOTCH4Q99466 2003 aa13.67□□□□□ -0.22
SNORD88B-201ENST00000408454 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.66□□□□□ -0.22
SNORD88B-201ENST00000408454 FAM237AA0A1B0GTK4 181 aa13.66□□□□□ -0.22
SNORD88B-201ENST00000408454 ABL1P00519 1130 aa13.66□□□□□ -0.22
SNORD88B-201ENST00000408454 EPB41P11171 864 aaKnown RBP13.66□□□□□ -0.22
SNORD88B-201ENST00000408454 NR2F2P24468 414 aa13.66□□□□□ -0.22
SNORD88B-201ENST00000408454 SLC7A9P82251 487 aa13.66□□□□□ -0.22
SNORD88B-201ENST00000408454 CETN1Q12798 172 aa13.66□□□□□ -0.22
SNORD88B-201ENST00000408454 ELF2Q15723 593 aa13.66□□□□□ -0.22
SNORD88B-201ENST00000408454 EDRF1Q3B7T1 1238 aa13.66□□□□□ -0.22
SNORD88B-201ENST00000408454 PRR23BQ6ZRT6 265 aa13.66□□□□□ -0.22
SNORD88B-201ENST00000408454 MAML2Q8IZL2 1156 aaPredicted RBP13.66□□□□□ -0.22
SNORD88B-201ENST00000408454 SUMF1Q8NBK3 374 aa13.66□□□□□ -0.22
SNORD88B-201ENST00000408454 SH3RF2Q8TEC5 729 aa13.66□□□□□ -0.22
SNORD88B-201ENST00000408454 HPS3Q969F9 1004 aa13.66□□□□□ -0.22
SNORD88B-201ENST00000408454 DUSP9Q99956 384 aaKnown RBP13.66□□□□□ -0.22
SNORD88B-201ENST00000408454 FGFBP2Q9BYJ0 223 aa13.66□□□□□ -0.22
SNORD88B-201ENST00000408454 IKZF4Q9H2S9 585 aa13.66□□□□□ -0.22
SNORD88B-201ENST00000408454 EBF3Q9H4W6 596 aa13.66□□□□□ -0.22
SNORD88B-201ENST00000408454 ECT2Q9H8V3 914 aa13.66□□□□□ -0.22
SNORD88B-201ENST00000408454 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.66□□□□□ -0.22
SNORD88B-201ENST00000408454 TLR8Q9NR97 1041 aaKnown RBP13.66□□□□□ -0.22
SNORD88B-201ENST00000408454 TMLHEQ9NVH6 421 aa13.66□□□□□ -0.22
SNORD88B-201ENST00000408454 LSM7Q9UK45 103 aaKnown RBP13.66□□□□□ -0.22
SNORD88B-201ENST00000408454 USP18Q9UMW8 372 aa13.66□□□□□ -0.22
SNORD88B-201ENST00000408454 PATJQ8NI35 1801 aa13.66□□□□□ -0.22
SNORD88B-201ENST00000408454 SCN1AP35498 2009 aa13.65□□□□□ -0.22
SNORD88B-201ENST00000408454 A0A1B0GVL5 298 aa13.65□□□□□ -0.22
SNORD88B-201ENST00000408454 E2F8A0AVK6 867 aa13.65□□□□□ -0.22
SNORD88B-201ENST00000408454 F8VP50 259 aa13.65□□□□□ -0.22
SNORD88B-201ENST00000408454 CETN3O15182 167 aa13.65□□□□□ -0.22
SNORD88B-201ENST00000408454 CCDC192P0DO97 292 aa13.65□□□□□ -0.22
SNORD88B-201ENST00000408454 HOXD13P35453 343 aa13.65□□□□□ -0.22
SNORD88B-201ENST00000408454 VAMP7P51809 220 aa13.65□□□□□ -0.22
SNORD88B-201ENST00000408454 MYL6P60660 151 aa13.65□□□□□ -0.22
SNORD88B-201ENST00000408454 ZNF77Q15935 545 aa13.65□□□□□ -0.22
SNORD88B-201ENST00000408454 ZACNQ401N2 412 aa13.65□□□□□ -0.22
SNORD88B-201ENST00000408454 WDR44Q5JSH3 913 aa13.65□□□□□ -0.22
SNORD88B-201ENST00000408454 HECTD3Q5T447 861 aa13.65□□□□□ -0.22
SNORD88B-201ENST00000408454 DGLUCYQ7Z3D6 616 aa13.65□□□□□ -0.22
SNORD88B-201ENST00000408454 CACNA2D4Q7Z3S7 1137 aa13.65□□□□□ -0.22
SNORD88B-201ENST00000408454 WDR5BQ86VZ2 330 aa13.65□□□□□ -0.22
SNORD88B-201ENST00000408454 FAM186BQ8IYM0 893 aa13.65□□□□□ -0.22
SNORD88B-201ENST00000408454 KIAA2013Q8IYS2 634 aa13.65□□□□□ -0.22
SNORD88B-201ENST00000408454 ZNF687Q8N1G0 1237 aa13.65□□□□□ -0.22
SNORD88B-201ENST00000408454 KCNV2Q8TDN2 545 aa13.65□□□□□ -0.22
SNORD88B-201ENST00000408454 FBXO32Q969P5 355 aa13.65□□□□□ -0.22
SNORD88B-201ENST00000408454 NT5C1AQ9BXI3 368 aa13.65□□□□□ -0.22
SNORD88B-201ENST00000408454 CRTAC1Q9NQ79 661 aa13.65□□□□□ -0.22
SNORD88B-201ENST00000408454 DMAC2Q9NW81 257 aa13.65□□□□□ -0.22
SNORD88B-201ENST00000408454 HPSEQ9Y251 543 aa13.65□□□□□ -0.22
SNORD88B-201ENST00000408454 SH3BP1Q9Y3L3 701 aa13.65□□□□□ -0.22
SNORD88B-201ENST00000408454 PCDHGA5Q9Y5G8 931 aa13.65□□□□□ -0.22
SNORD88B-201ENST00000408454 RHOBTB1O94844 696 aa13.64□□□□□ -0.23
SNORD88B-201ENST00000408454 FAM200BP0CF97 657 aa13.64□□□□□ -0.23
SNORD88B-201ENST00000408454 LMO2P25791 158 aa13.64□□□□□ -0.23
SNORD88B-201ENST00000408454 STK4Q13043 487 aa13.64□□□□□ -0.23
SNORD88B-201ENST00000408454 FZD5Q13467 585 aa13.64□□□□□ -0.23
SNORD88B-201ENST00000408454 KRT39Q6A163 491 aa13.64□□□□□ -0.23
SNORD88B-201ENST00000408454 KRBA2Q6ZNG9 492 aa13.64□□□□□ -0.23
SNORD88B-201ENST00000408454 SYT13Q7L8C5 426 aa13.64□□□□□ -0.23
SNORD88B-201ENST00000408454 TMEM150AQ86TG1 271 aa13.64□□□□□ -0.23
SNORD88B-201ENST00000408454 OSTM1Q86WC4 334 aa13.64□□□□□ -0.23
SNORD88B-201ENST00000408454 ARHGAP18Q8N392 663 aa13.64□□□□□ -0.23
SNORD88B-201ENST00000408454 ARL14EPQ8N8R7 260 aaPredicted RBP13.64□□□□□ -0.23
SNORD88B-201ENST00000408454 TTC16Q8NEE8 873 aa13.64□□□□□ -0.23
SNORD88B-201ENST00000408454 ZFYVE19Q96K21 471 aa13.64□□□□□ -0.23
SNORD88B-201ENST00000408454 GSDMAQ96QA5 445 aa13.64□□□□□ -0.23
SNORD88B-201ENST00000408454 RTKNQ9BST9 563 aa13.64□□□□□ -0.23
SNORD88B-201ENST00000408454 XYLT2Q9H1B5 865 aa13.64□□□□□ -0.23
SNORD88B-201ENST00000408454 KCTD10Q9H3F6 313 aa13.64□□□□□ -0.23
SNORD88B-201ENST00000408454 PCDHA5Q9Y5H7 936 aa13.64□□□□□ -0.23
SNORD88B-201ENST00000408454 TICRRQ7Z2Z1 1910 aa13.64□□□□□ -0.23
SNORD88B-201ENST00000408454 PTPRJQ12913 1337 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms