RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 OSCP1Q8WVF1 389 aa13.42□□□□□ -0.26
RNF43-201ENST00000407977 SEPT1Q8WYJ6 367 aa13.42□□□□□ -0.26
RNF43-201ENST00000407977 PABPC5Q96DU9 382 aaKnown RBP13.42□□□□□ -0.26
RNF43-201ENST00000407977 TFR2Q9UP52 801 aa13.42□□□□□ -0.26
RNF43-201ENST00000407977 PIK3CDO00329 1044 aa13.42□□□□□ -0.26
RNF43-201ENST00000407977 RHOBTB1O94844 696 aa13.42□□□□□ -0.26
RNF43-201ENST00000407977 FASP25445 335 aa13.42□□□□□ -0.26
RNF43-201ENST00000407977 ANXA11P50995 505 aaKnown RBP13.42□□□□□ -0.26
RNF43-201ENST00000407977 TBL3Q12788 808 aaKnown RBP13.42□□□□□ -0.26
RNF43-201ENST00000407977 KDELC2Q7Z4H8 507 aa13.42□□□□□ -0.26
RNF43-201ENST00000407977 CENPTQ96BT3 561 aa13.42□□□□□ -0.26
RNF43-201ENST00000407977 WRNIP1Q96S55 665 aa13.42□□□□□ -0.26
RNF43-201ENST00000407977 SMARCAD1Q9H4L7 1026 aa13.42□□□□□ -0.26
RNF43-201ENST00000407977 METTL5Q9NRN9 209 aaKnown RBP13.42□□□□□ -0.26
RNF43-201ENST00000407977 ATAD3AQ9NVI7 634 aa13.42□□□□□ -0.26
RNF43-201ENST00000407977 DUSP10Q9Y6W6 482 aa13.42□□□□□ -0.26
RNF43-201ENST00000407977 ADCY10Q96PN6 1610 aa13.42□□□□□ -0.26
RNF43-201ENST00000407977 MAP3K4Q9Y6R4 1608 aa13.42□□□□□ -0.26
RNF43-201ENST00000407977 HMGB3O15347 200 aaKnown RBP13.42□□□□□ -0.26
RNF43-201ENST00000407977 ECE2O60344 883 aa13.42□□□□□ -0.26
RNF43-201ENST00000407977 PCSK1P29120 753 aa13.42□□□□□ -0.26
RNF43-201ENST00000407977 SPP2Q13103 211 aa13.42□□□□□ -0.26
RNF43-201ENST00000407977 NCF4Q15080 339 aa13.42□□□□□ -0.26
RNF43-201ENST00000407977 PDPK2PQ6A1A2 396 aa13.42□□□□□ -0.26
RNF43-201ENST00000407977 TMC5Q6UXY8 1006 aa13.42□□□□□ -0.26
RNF43-201ENST00000407977 FUKQ8N0W3 1084 aa13.42□□□□□ -0.26
RNF43-201ENST00000407977 SVOPQ8N4V2 548 aa13.42□□□□□ -0.26
RNF43-201ENST00000407977 USP33Q8TEY7 942 aa13.42□□□□□ -0.26
RNF43-201ENST00000407977 PRMT7Q9NVM4 692 aaPredicted RBP13.42□□□□□ -0.26
RNF43-201ENST00000407977 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.42□□□□□ -0.261e-8■□□□□ 9.5
RNF43-201ENST00000407977 TSR3Q9UJK0 312 aaKnown RBP13.42□□□□□ -0.26
RNF43-201ENST00000407977 OVOS2A0A0G2JMS6 1433 aa13.42□□□□□ -0.26
RNF43-201ENST00000407977 PNMA8CA0A1B0GUJ8 204 aa13.42□□□□□ -0.26
RNF43-201ENST00000407977 RIPK2O43353 540 aa13.42□□□□□ -0.26
RNF43-201ENST00000407977 SUPT7LO94864 414 aa13.42□□□□□ -0.26
RNF43-201ENST00000407977 CPA3P15088 417 aa13.42□□□□□ -0.26
RNF43-201ENST00000407977 CD44P16070 742 aaKnown RBP13.42□□□□□ -0.26
RNF43-201ENST00000407977 OTUD4Q01804 1114 aaKnown RBP13.42□□□□□ -0.26
RNF43-201ENST00000407977 SNX31Q8N9S9 440 aa13.42□□□□□ -0.26
RNF43-201ENST00000407977 PIK3R5Q8WYR1 880 aa13.42□□□□□ -0.26
RNF43-201ENST00000407977 TMEM79Q9BSE2 394 aa13.42□□□□□ -0.26
RNF43-201ENST00000407977 SLC38A7Q9NVC3 462 aa13.42□□□□□ -0.26
RNF43-201ENST00000407977 NAALADL1Q9UQQ1 740 aa13.42□□□□□ -0.26
RNF43-201ENST00000407977 KDM6AO15550 1401 aaPredicted RBP13.41□□□□□ -0.26
RNF43-201ENST00000407977 HEATR9A2RTY3 570 aa13.41□□□□□ -0.26
RNF43-201ENST00000407977 FAM196BA6NMK8 535 aa13.41□□□□□ -0.26
RNF43-201ENST00000407977 FOXN3O00409 490 aaPredicted RBP13.41□□□□□ -0.26
RNF43-201ENST00000407977 PROSCO94903 275 aa13.41□□□□□ -0.26
RNF43-201ENST00000407977 CYBBP04839 570 aa13.41□□□□□ -0.26
RNF43-201ENST00000407977 RARBP10826 455 aa13.41□□□□□ -0.26
RNF43-201ENST00000407977 SMTNL2Q2TAL5 461 aa13.41□□□□□ -0.26
RNF43-201ENST00000407977 SV2CQ496J9 727 aa13.41□□□□□ -0.26
RNF43-201ENST00000407977 LRRC74BQ6ZQY2 392 aa13.41□□□□□ -0.26
RNF43-201ENST00000407977 PACS2Q86VP3 889 aa13.41□□□□□ -0.26
RNF43-201ENST00000407977 ZCCHC7Q8N3Z6 543 aaKnown RBP13.41□□□□□ -0.26
RNF43-201ENST00000407977 NDEL1Q9GZM8 345 aa13.41□□□□□ -0.26
RNF43-201ENST00000407977 DYRK4Q9NR20 520 aa13.41□□□□□ -0.26
RNF43-201ENST00000407977 VTI1BQ9UEU0 232 aa13.41□□□□□ -0.26
RNF43-201ENST00000407977 NPHP4O75161 1426 aaPredicted RBP13.41□□□□□ -0.26
RNF43-201ENST00000407977 ADGRA2Q96PE1 1338 aa13.41□□□□□ -0.26
RNF43-201ENST00000407977 NBPF26B4DH59 902 aa13.41□□□□□ -0.26
RNF43-201ENST00000407977 GYS1P13807 737 aa13.41□□□□□ -0.26
RNF43-201ENST00000407977 CPB1P15086 417 aa13.41□□□□□ -0.26
RNF43-201ENST00000407977 RRM2P31350 389 aa13.41□□□□□ -0.26
RNF43-201ENST00000407977 SNX17Q15036 470 aa13.41□□□□□ -0.26
RNF43-201ENST00000407977 TMC3Q7Z5M5 1100 aa13.41□□□□□ -0.26
RNF43-201ENST00000407977 APOBEC3FQ8IUX4 373 aaKnown RBP13.41□□□□□ -0.26
RNF43-201ENST00000407977 NBPF15Q8N660 670 aa13.41□□□□□ -0.26
RNF43-201ENST00000407977 MXRA8Q9BRK3 442 aa13.41□□□□□ -0.26
RNF43-201ENST00000407977 SHCBP1LQ9BZQ2 653 aa13.41□□□□□ -0.26
RNF43-201ENST00000407977 GANQ9H2C0 597 aa13.41□□□□□ -0.26
RNF43-201ENST00000407977 PCDH9Q9HC56 1237 aa13.41□□□□□ -0.26
RNF43-201ENST00000407977 DRG1Q9Y295 367 aaKnown RBP13.41□□□□□ -0.26
RNF43-201ENST00000407977 ASNA1O43681 348 aa13.41□□□□□ -0.26
RNF43-201ENST00000407977 GAS2O43903 313 aaKnown RBP13.41□□□□□ -0.26
RNF43-201ENST00000407977 MED26O95402 600 aa13.41□□□□□ -0.26
RNF43-201ENST00000407977 CYP11B2P19099 503 aa13.41□□□□□ -0.26
RNF43-201ENST00000407977 HPCAP84074 193 aa13.41□□□□□ -0.26
RNF43-201ENST00000407977 ARHGAP17Q68EM7 881 aa13.41□□□□□ -0.26
RNF43-201ENST00000407977 CENPLQ8N0S6 344 aaPredicted RBP13.41□□□□□ -0.26
RNF43-201ENST00000407977 MPP4Q96JB8 637 aa13.41□□□□□ -0.26
RNF43-201ENST00000407977 MMP19Q99542 508 aa13.41□□□□□ -0.26
RNF43-201ENST00000407977 PRRG3Q9BZD7 231 aa13.41□□□□□ -0.26
RNF43-201ENST00000407977 RABGEF1Q9UJ41 708 aa13.41□□□□□ -0.26
RNF43-201ENST00000407977 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.41□□□□□ -0.26
RNF43-201ENST00000407977 FLT1P17948 1338 aa13.41□□□□□ -0.26
RNF43-201ENST00000407977 LSM8O95777 96 aaKnown RBP13.41□□□□□ -0.26
RNF43-201ENST00000407977 NDUFB10O96000 172 aa13.41□□□□□ -0.26
RNF43-201ENST00000407977 IFNA14P01570 189 aa13.41□□□□□ -0.26
RNF43-201ENST00000407977 GRIK1P39086 918 aa13.41□□□□□ -0.26
RNF43-201ENST00000407977 PNPLA4P41247 253 aa13.41□□□□□ -0.26
RNF43-201ENST00000407977 MYRFQ9Y2G1 1151 aa13.41□□□□□ -0.26
RNF43-201ENST00000407977 PBRM1Q86U86 1689 aa13.41□□□□□ -0.26
RNF43-201ENST00000407977 CSF1RP07333 972 aa13.41□□□□□ -0.26
RNF43-201ENST00000407977 NFYCQ13952 458 aa13.41□□□□□ -0.26
RNF43-201ENST00000407977 IER5Q5VY09 327 aa13.41□□□□□ -0.26
RNF43-201ENST00000407977 TMEM143Q96AN5 459 aa13.41□□□□□ -0.26
RNF43-201ENST00000407977 ZNF184Q99676 751 aaPredicted RBP13.41□□□□□ -0.26
RNF43-201ENST00000407977 ARHGAP20Q9P2F6 1191 aa13.41□□□□□ -0.26
RNF43-201ENST00000407977 USP31Q70CQ4 1352 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms