RNA–Protein interactions for RNA: ENST00000407249.7

CDK11B-204, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,677 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-204ENST00000407249 C4orf33Q8N1A6 199 aa17.12■□□□□ 0.33
CDK11B-204ENST00000407249 CHST13Q8NET6 341 aa17.12■□□□□ 0.33
CDK11B-204ENST00000407249 FGD4Q96M96 766 aa17.12■□□□□ 0.33
CDK11B-204ENST00000407249 TTC25Q96NG3 672 aa17.12■□□□□ 0.33
CDK11B-204ENST00000407249 CYLDQ9NQC7 956 aa17.12■□□□□ 0.33
CDK11B-204ENST00000407249 PCDHA10Q9Y5I2 948 aa17.12■□□□□ 0.33
CDK11B-204ENST00000407249 EIF4E1BA6NMX2 242 aaKnown RBP17.11■□□□□ 0.33
CDK11B-204ENST00000407249 CA4P22748 312 aa17.11■□□□□ 0.33
CDK11B-204ENST00000407249 USP46P62068 366 aa17.11■□□□□ 0.33
CDK11B-204ENST00000407249 MAP7Q14244 749 aa17.11■□□□□ 0.33
CDK11B-204ENST00000407249 SLC1A5Q15758 541 aa17.11■□□□□ 0.33
CDK11B-204ENST00000407249 GLIS1Q8NBF1 620 aa17.11■□□□□ 0.33
CDK11B-204ENST00000407249 TMC2Q8TDI7 906 aa17.11■□□□□ 0.33
CDK11B-204ENST00000407249 WNK4Q96J92 1243 aa17.11■□□□□ 0.33
CDK11B-204ENST00000407249 SRPK1Q96SB4 655 aaKnown RBP17.11■□□□□ 0.33
CDK11B-204ENST00000407249 VCX3BQ9H321 246 aa17.11■□□□□ 0.33
CDK11B-204ENST00000407249 DENND2DQ9H6A0 471 aaPredicted RBP17.11■□□□□ 0.33
CDK11B-204ENST00000407249 RPL26L1Q9UNX3 145 aaKnown RBP17.11■□□□□ 0.33
CDK11B-204ENST00000407249 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.11■□□□□ 0.33
CDK11B-204ENST00000407249 TBKBP1A7MCY6 615 aa17.11■□□□□ 0.33
CDK11B-204ENST00000407249 TYROBPO43914 113 aa17.11■□□□□ 0.33
CDK11B-204ENST00000407249 TGFB3P10600 412 aa17.11■□□□□ 0.33
CDK11B-204ENST00000407249 HSPA8P11142 646 aaKnown RBP17.11■□□□□ 0.33
CDK11B-204ENST00000407249 FGFR1P11362 822 aa17.11■□□□□ 0.33
CDK11B-204ENST00000407249 PTDSS1P48651 473 aaKnown RBP17.11■□□□□ 0.33
CDK11B-204ENST00000407249 COL19A1Q14993 1142 aa17.11■□□□□ 0.33
CDK11B-204ENST00000407249 FASTKD3Q14CZ7 662 aaKnown RBP17.11■□□□□ 0.33
CDK11B-204ENST00000407249 CCDC142Q17RM4 750 aa17.11■□□□□ 0.33
CDK11B-204ENST00000407249 SLC45A4Q5BKX6 768 aa17.11■□□□□ 0.33
CDK11B-204ENST00000407249 CCSAPQ6IQ19 270 aaPredicted RBP17.11■□□□□ 0.33
CDK11B-204ENST00000407249 ENOSF1Q7L5Y1 443 aa17.11■□□□□ 0.33
CDK11B-204ENST00000407249 ZNF554Q86TJ5 538 aa17.11■□□□□ 0.33
CDK11B-204ENST00000407249 BPHLQ86WA6 291 aaPredicted RBP17.11■□□□□ 0.33
CDK11B-204ENST00000407249 LRRC43Q8N309 656 aa17.11■□□□□ 0.33
CDK11B-204ENST00000407249 SH3TC2Q8TF17 1288 aa17.11■□□□□ 0.33
CDK11B-204ENST00000407249 PI4K2AQ9BTU6 479 aa17.11■□□□□ 0.33
CDK11B-204ENST00000407249 TLE6Q9H808 572 aa17.11■□□□□ 0.33
CDK11B-204ENST00000407249 VCX3AQ9NNX9 186 aa17.11■□□□□ 0.33
CDK11B-204ENST00000407249 ADARB2Q9NS39 739 aaKnown RBP17.11■□□□□ 0.33
CDK11B-204ENST00000407249 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.11■□□□□ 0.33
CDK11B-204ENST00000407249 TBX20Q9UMR3 447 aa17.11■□□□□ 0.33
CDK11B-204ENST00000407249 PAPPA2Q9BXP8 1791 aa17.1■□□□□ 0.33
CDK11B-204ENST00000407249 TMEM150BA6NC51 233 aa17.1■□□□□ 0.33
CDK11B-204ENST00000407249 SPDYE16A6NNV3 312 aaPredicted RBP17.1■□□□□ 0.33
CDK11B-204ENST00000407249 DNALI1O14645 258 aaPredicted RBP17.1■□□□□ 0.33
CDK11B-204ENST00000407249 ENTPD5O75356 428 aa17.1■□□□□ 0.33
CDK11B-204ENST00000407249 GTF2H1P32780 548 aa17.1■□□□□ 0.33
CDK11B-204ENST00000407249 NSFP46459 744 aaKnown RBP17.1■□□□□ 0.33
CDK11B-204ENST00000407249 HIRAP54198 1017 aaPredicted RBP17.1■□□□□ 0.33
CDK11B-204ENST00000407249 CNGA3Q16281 694 aa17.1■□□□□ 0.33
CDK11B-204ENST00000407249 TAF1BQ53T94 588 aaPredicted RBP17.1■□□□□ 0.33
CDK11B-204ENST00000407249 MON1BQ7L1V2 547 aa17.1■□□□□ 0.33
CDK11B-204ENST00000407249 OTOAQ7RTW8 1153 aa17.1■□□□□ 0.33
CDK11B-204ENST00000407249 EXD1Q8NHP7 514 aa17.1■□□□□ 0.33
CDK11B-204ENST00000407249 MFSD14AQ96MC6 490 aa17.1■□□□□ 0.33
CDK11B-204ENST00000407249 FHDC1Q9C0D6 1143 aaPredicted RBP17.1■□□□□ 0.33
CDK11B-204ENST00000407249 C17orf75Q9HAS0 396 aa17.1■□□□□ 0.33
CDK11B-204ENST00000407249 EXOC7Q9UPT5 735 aa17.1■□□□□ 0.33
CDK11B-204ENST00000407249 PCDHB2Q9Y5E7 798 aa17.1■□□□□ 0.33
CDK11B-204ENST00000407249 A0A0G2JMZ2 1700 aa17.1■□□□□ 0.33
CDK11B-204ENST00000407249 ATP9AO75110 1047 aa17.1■□□□□ 0.33
CDK11B-204ENST00000407249 CCNE2O96020 404 aa17.1■□□□□ 0.33
CDK11B-204ENST00000407249 HNRNPCP07910 306 aaKnown RBP eCLIP17.1■□□□□ 0.33
CDK11B-204ENST00000407249 CD58P19256 250 aa17.1■□□□□ 0.33
CDK11B-204ENST00000407249 PTPN4P29074 926 aa17.1■□□□□ 0.33
CDK11B-204ENST00000407249 PCK1P35558 622 aa17.1■□□□□ 0.33
CDK11B-204ENST00000407249 CD97P48960 835 aa17.1■□□□□ 0.33
CDK11B-204ENST00000407249 SULT2A1Q06520 285 aa17.1■□□□□ 0.33
CDK11B-204ENST00000407249 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.1■□□□□ 0.33
CDK11B-204ENST00000407249 TTC8Q8TAM2 541 aa17.1■□□□□ 0.33
CDK11B-204ENST00000407249 FBXL18Q96ME1 805 aa17.1■□□□□ 0.33
CDK11B-204ENST00000407249 DKK3Q9UBP4 350 aa17.1■□□□□ 0.33
CDK11B-204ENST00000407249 C2CD2LO14523 706 aa17.09■□□□□ 0.33
CDK11B-204ENST00000407249 USP2O75604 605 aaPredicted RBP17.09■□□□□ 0.33
CDK11B-204ENST00000407249 CYP1A1P04798 512 aaPredicted RBP17.09■□□□□ 0.33
CDK11B-204ENST00000407249 PSAPP07602 524 aa17.09■□□□□ 0.33
CDK11B-204ENST00000407249 SLC44A4Q53GD3 710 aa17.09■□□□□ 0.33
CDK11B-204ENST00000407249 HP1BP3Q5SSJ5 553 aaPredicted RBP17.09■□□□□ 0.33
CDK11B-204ENST00000407249 PRAMEF18Q5VWM3 479 aa17.09■□□□□ 0.33
CDK11B-204ENST00000407249 ZNF677Q86XU0 584 aa17.09■□□□□ 0.33
CDK11B-204ENST00000407249 MAP4K3Q8IVH8 894 aa17.09■□□□□ 0.33
CDK11B-204ENST00000407249 LMNTD2Q8IXW0 634 aa17.09■□□□□ 0.33
CDK11B-204ENST00000407249 TMEM161BQ8NDZ6 487 aa17.09■□□□□ 0.33
CDK11B-204ENST00000407249 DNERQ8NFT8 737 aa17.09■□□□□ 0.33
CDK11B-204ENST00000407249 EIF2AQ9BY44 585 aaKnown RBP17.09■□□□□ 0.33
CDK11B-204ENST00000407249 FBXO40Q9UH90 709 aa17.09■□□□□ 0.33
CDK11B-204ENST00000407249 LNPEPQ9UIQ6 1025 aa17.09■□□□□ 0.33
CDK11B-204ENST00000407249 ZNF148Q9UQR1 794 aa17.09■□□□□ 0.33
CDK11B-204ENST00000407249 H0Y3Z8 333 aa17.09■□□□□ 0.33
CDK11B-204ENST00000407249 LIASO43766 372 aa17.09■□□□□ 0.33
CDK11B-204ENST00000407249 LGR5O75473 907 aa17.09■□□□□ 0.33
CDK11B-204ENST00000407249 XKR9Q5GH70 373 aa17.09■□□□□ 0.33
CDK11B-204ENST00000407249 NLRP9Q7RTR0 991 aa17.09■□□□□ 0.33
CDK11B-204ENST00000407249 ARHGAP18Q8N392 663 aa17.09■□□□□ 0.33
CDK11B-204ENST00000407249 ZNF75CPQ92670 426 aaPredicted RBP17.09■□□□□ 0.33
CDK11B-204ENST00000407249 ZFP69BQ9UJL9 534 aa17.09■□□□□ 0.33
CDK11B-204ENST00000407249 DNPEPQ9ULA0 475 aa17.09■□□□□ 0.33
CDK11B-204ENST00000407249 SNCAIPQ9Y6H5 919 aa17.09■□□□□ 0.33
CDK11B-204ENST00000407249 A0A1W2PPM1 405 aa17.08■□□□□ 0.33
CDK11B-204ENST00000407249 ZSCAN5DPP0CG00 497 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms