RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 ARSAP15289 507 aa16.38■□□□□ 0.21
TPM1-207ENST00000403994 PTPN1P18031 435 aaKnown RBP16.38■□□□□ 0.21
TPM1-207ENST00000403994 RAP1GAPP47736 663 aa16.38■□□□□ 0.21
TPM1-207ENST00000403994 DLG4P78352 724 aa16.38■□□□□ 0.21
TPM1-207ENST00000403994 RUNX3Q13761 415 aa16.38■□□□□ 0.21
TPM1-207ENST00000403994 KCNB1Q14721 858 aa16.38■□□□□ 0.21
TPM1-207ENST00000403994 PPP2R5DQ14738 602 aa16.38■□□□□ 0.21
TPM1-207ENST00000403994 MTF1Q14872 753 aa16.38■□□□□ 0.21
TPM1-207ENST00000403994 DGKKQ5KSL6 1271 aa16.38■□□□□ 0.21
TPM1-207ENST00000403994 KRBA2Q6ZNG9 492 aa16.38■□□□□ 0.21
TPM1-207ENST00000403994 SPEM1Q8N4L4 309 aa16.38■□□□□ 0.21
TPM1-207ENST00000403994 ELMO3Q96BJ8 720 aa16.38■□□□□ 0.21
TPM1-207ENST00000403994 HINFPQ9BQA5 517 aa16.38■□□□□ 0.21
TPM1-207ENST00000403994 ZNF518BQ9C0D4 1074 aa16.38■□□□□ 0.21
TPM1-207ENST00000403994 ELOVL4Q9GZR5 314 aa16.38■□□□□ 0.21
TPM1-207ENST00000403994 EPC1Q9H2F5 836 aa16.38■□□□□ 0.21
TPM1-207ENST00000403994 GDPD2Q9HCC8 539 aa16.38■□□□□ 0.21
TPM1-207ENST00000403994 GCNT4Q9P109 453 aa16.38■□□□□ 0.21
TPM1-207ENST00000403994 SMG5Q9UPR3 1016 aaKnown RBP16.38■□□□□ 0.21
TPM1-207ENST00000403994 MYH10P35580 1976 aa16.37■□□□□ 0.21
TPM1-207ENST00000403994 A8MXQ7 604 aa16.37■□□□□ 0.21
TPM1-207ENST00000403994 PAPSS2O95340 614 aaPredicted RBP16.37■□□□□ 0.21
TPM1-207ENST00000403994 C4BPAP04003 597 aaKnown RBP16.37■□□□□ 0.21
TPM1-207ENST00000403994 NOP14P78316 857 aaKnown RBP16.37■□□□□ 0.21
TPM1-207ENST00000403994 ZACNQ401N2 412 aa16.37■□□□□ 0.21
TPM1-207ENST00000403994 ZNF667Q5HYK9 610 aa16.37■□□□□ 0.21
TPM1-207ENST00000403994 C1orf220Q5T0J3 134 aa16.37■□□□□ 0.21
TPM1-207ENST00000403994 CEP135Q66GS9 1140 aa16.37■□□□□ 0.21
TPM1-207ENST00000403994 CC2D1AQ6P1N0 951 aaPredicted RBP16.37■□□□□ 0.21
TPM1-207ENST00000403994 ARL14EPQ8N8R7 260 aaPredicted RBP16.37■□□□□ 0.21
TPM1-207ENST00000403994 RUBCNQ92622 972 aa16.37■□□□□ 0.21
TPM1-207ENST00000403994 C8orf48Q96LL4 319 aa16.37■□□□□ 0.21
TPM1-207ENST00000403994 CYP2S1Q96SQ9 504 aa16.37■□□□□ 0.21
TPM1-207ENST00000403994 B3GNT5Q9BYG0 378 aa16.37■□□□□ 0.21
TPM1-207ENST00000403994 TRAF3IP3Q9Y228 551 aa16.37■□□□□ 0.21
TPM1-207ENST00000403994 LAMA1P25391 3075 aa16.37■□□□□ 0.21
TPM1-207ENST00000403994 CLDN5O00501 218 aa16.36■□□□□ 0.21
TPM1-207ENST00000403994 CALUO43852 315 aaPredicted RBP16.36■□□□□ 0.21
TPM1-207ENST00000403994 KIF20AO95235 890 aa16.36■□□□□ 0.21
TPM1-207ENST00000403994 CDH8P55286 799 aa16.36■□□□□ 0.21
TPM1-207ENST00000403994 PDGFRLQ15198 375 aa16.36■□□□□ 0.21
TPM1-207ENST00000403994 FAM35AQ86V20 835 aa16.36■□□□□ 0.21
TPM1-207ENST00000403994 TTC16Q8NEE8 873 aa16.36■□□□□ 0.21
TPM1-207ENST00000403994 TMC2Q8TDI7 906 aa16.36■□□□□ 0.21
TPM1-207ENST00000403994 OSCP1Q8WVF1 389 aa16.36■□□□□ 0.21
TPM1-207ENST00000403994 CCDC47Q96A33 483 aaKnown RBP16.36■□□□□ 0.21
TPM1-207ENST00000403994 SDCBP2Q9H190 292 aa16.36■□□□□ 0.21
TPM1-207ENST00000403994 C2orf42Q9NWW7 574 aa16.36■□□□□ 0.21
TPM1-207ENST00000403994 EHD2Q9NZN4 543 aa16.36■□□□□ 0.21
TPM1-207ENST00000403994 ARHGAP26Q9UNA1 814 aa16.36■□□□□ 0.21
TPM1-207ENST00000403994 FRMD4BQ9Y2L6 1034 aa16.36■□□□□ 0.21
TPM1-207ENST00000403994 MAPK13O15264 365 aa16.35■□□□□ 0.21
TPM1-207ENST00000403994 TCF3P15923 654 aa16.35■□□□□ 0.21
TPM1-207ENST00000403994 NR2F2P24468 414 aa16.35■□□□□ 0.21
TPM1-207ENST00000403994 PIK3CAP42336 1068 aa16.35■□□□□ 0.21
TPM1-207ENST00000403994 CXCL12P48061 93 aa16.35■□□□□ 0.21
TPM1-207ENST00000403994 PDE6CP51160 858 aa16.35■□□□□ 0.21
TPM1-207ENST00000403994 NRLP54845 237 aa16.35■□□□□ 0.21
TPM1-207ENST00000403994 NFIL3Q16649 462 aa16.35■□□□□ 0.21
TPM1-207ENST00000403994 TMEM196Q5HYL7 178 aa16.35■□□□□ 0.21
TPM1-207ENST00000403994 FSTL4Q6MZW2 842 aa16.35■□□□□ 0.21
TPM1-207ENST00000403994 KIAA2013Q8IYS2 634 aa16.35■□□□□ 0.21
TPM1-207ENST00000403994 SYNPOQ8N3V7 929 aa16.35■□□□□ 0.21
TPM1-207ENST00000403994 GUF1Q8N442 669 aaKnown RBP16.35■□□□□ 0.21
TPM1-207ENST00000403994 CPA6Q8N4T0 437 aa16.35■□□□□ 0.21
TPM1-207ENST00000403994 DCLK2Q8N568 766 aa16.35■□□□□ 0.21
TPM1-207ENST00000403994 SH3RF2Q8TEC5 729 aa16.35■□□□□ 0.21
TPM1-207ENST00000403994 ATP2A3Q93084 1043 aa16.35■□□□□ 0.21
TPM1-207ENST00000403994 TRPM5Q9NZQ8 1165 aa16.35■□□□□ 0.21
TPM1-207ENST00000403994 HMGXB4Q9UGU5 601 aa16.35■□□□□ 0.21
TPM1-207ENST00000403994 MAPK8IP1Q9UQF2 711 aa16.35■□□□□ 0.21
TPM1-207ENST00000403994 WNT6Q9Y6F9 365 aa16.35■□□□□ 0.21
TPM1-207ENST00000403994 ATP8B3O60423 1300 aa16.35■□□□□ 0.21
TPM1-207ENST00000403994 ATG2BQ96BY7 2078 aa16.34■□□□□ 0.21
TPM1-207ENST00000403994 ZNF840PA6NDX5 716 aa16.34■□□□□ 0.21
TPM1-207ENST00000403994 K7ESF4 209 aa16.34■□□□□ 0.21
TPM1-207ENST00000403994 TRDMT1O14717 391 aaKnown RBP16.34■□□□□ 0.21
TPM1-207ENST00000403994 IKBKBO14920 756 aa16.34■□□□□ 0.21
TPM1-207ENST00000403994 AKAP3O75969 853 aa16.34■□□□□ 0.21
TPM1-207ENST00000403994 ZNF202O95125 648 aa16.34■□□□□ 0.21
TPM1-207ENST00000403994 OLFM2O95897 454 aa16.34■□□□□ 0.21
TPM1-207ENST00000403994 ASS1P00966 412 aaKnown RBP16.34■□□□□ 0.21
TPM1-207ENST00000403994 TRIM49P0CI25 452 aa16.34■□□□□ 0.21
TPM1-207ENST00000403994 TRIM49CP0CI26 452 aa16.34■□□□□ 0.21
TPM1-207ENST00000403994 PFKLP17858 780 aa16.34■□□□□ 0.21
TPM1-207ENST00000403994 ASPAP45381 313 aa16.34■□□□□ 0.21
TPM1-207ENST00000403994 DMWDQ09019 674 aa16.34■□□□□ 0.21
TPM1-207ENST00000403994 EML3Q32P44 896 aa16.34■□□□□ 0.21
TPM1-207ENST00000403994 ZCWPW2Q504Y3 356 aa16.34■□□□□ 0.21
TPM1-207ENST00000403994 NAIF1Q69YI7 327 aaPredicted RBP16.34■□□□□ 0.21
TPM1-207ENST00000403994 PKN3Q6P5Z2 889 aa16.34■□□□□ 0.21
TPM1-207ENST00000403994 SV2AQ7L0J3 742 aa16.34■□□□□ 0.21
TPM1-207ENST00000403994 TNIP3Q96KP6 325 aa16.34■□□□□ 0.21
TPM1-207ENST00000403994 ECT2Q9H8V3 914 aa16.34■□□□□ 0.21
TPM1-207ENST00000403994 KRT82Q9NSB4 513 aa16.34■□□□□ 0.21
TPM1-207ENST00000403994 DUS2Q9NX74 493 aaKnown RBP16.34■□□□□ 0.21
TPM1-207ENST00000403994 NCDNQ9UBB6 729 aa16.34■□□□□ 0.21
TPM1-207ENST00000403994 EML5Q05BV3 1969 aa16.33■□□□□ 0.21
TPM1-207ENST00000403994 SPAG17Q6Q759 2223 aa16.33■□□□□ 0.2
TPM1-207ENST00000403994 OAS1P00973 400 aaKnown RBP16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms