RNA–Protein interactions for RNA: ENST00000403441.1

PRAME-204, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 3

Gene PRAME, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-204ENST00000403441 HDCP19113 662 aa13.2□□□□□ -0.3
PRAME-204ENST00000403441 CASP5P51878 434 aa13.2□□□□□ -0.3
PRAME-204ENST00000403441 DGKEP52429 567 aa13.2□□□□□ -0.3
PRAME-204ENST00000403441 NUCB2P80303 420 aa13.2□□□□□ -0.3
PRAME-204ENST00000403441 MAPRE1Q15691 268 aaKnown RBP13.2□□□□□ -0.3
PRAME-204ENST00000403441 EML3Q32P44 896 aa13.2□□□□□ -0.3
PRAME-204ENST00000403441 ARL14EPQ8N8R7 260 aaPredicted RBP13.2□□□□□ -0.3
PRAME-204ENST00000403441 DHX58Q96C10 678 aa13.2□□□□□ -0.3
PRAME-204ENST00000403441 ANKRD36BP1Q96IX9 119 aa13.2□□□□□ -0.3
PRAME-204ENST00000403441 SPATA32Q96LK8 384 aa13.2□□□□□ -0.3
PRAME-204ENST00000403441 SLC22A12Q96S37 553 aa13.2□□□□□ -0.3
PRAME-204ENST00000403441 LSM14BQ9BX40 385 aaKnown RBP13.2□□□□□ -0.3
PRAME-204ENST00000403441 FGFBP2Q9BYJ0 223 aa13.2□□□□□ -0.3
PRAME-204ENST00000403441 PDE11AQ9HCR9 933 aa13.2□□□□□ -0.3
PRAME-204ENST00000403441 FAM13BQ9NYF5 915 aa13.2□□□□□ -0.3
PRAME-204ENST00000403441 EHD2Q9NZN4 543 aa13.2□□□□□ -0.3
PRAME-204ENST00000403441 ARHGAP26Q9UNA1 814 aa13.2□□□□□ -0.3
PRAME-204ENST00000403441 ATG2BQ96BY7 2078 aa13.2□□□□□ -0.3
PRAME-204ENST00000403441 EML5Q05BV3 1969 aa13.2□□□□□ -0.3
PRAME-204ENST00000403441 A0A1W2PQ27 194 aa13.19□□□□□ -0.3
PRAME-204ENST00000403441 A0A1W2PQ64 194 aa13.19□□□□□ -0.3
PRAME-204ENST00000403441 A0A1W2PQD8 194 aa13.19□□□□□ -0.3
PRAME-204ENST00000403441 C2orf78A6NCI8 922 aa13.19□□□□□ -0.3
PRAME-204ENST00000403441 DCLK1O15075 740 aa13.19□□□□□ -0.3
PRAME-204ENST00000403441 KIAA0391O15091 583 aaKnown RBP13.19□□□□□ -0.3
PRAME-204ENST00000403441 KCNK5O95279 499 aa13.19□□□□□ -0.3
PRAME-204ENST00000403441 CAVIN2O95810 425 aa13.19□□□□□ -0.3
PRAME-204ENST00000403441 TNNC2P02585 160 aa13.19□□□□□ -0.3
PRAME-204ENST00000403441 TCF3P15923 654 aa13.19□□□□□ -0.3
PRAME-204ENST00000403441 PFKLP17858 780 aa13.19□□□□□ -0.3
PRAME-204ENST00000403441 ANXA13P27216 316 aa13.19□□□□□ -0.3
PRAME-204ENST00000403441 CCDC142Q17RM4 750 aa13.19□□□□□ -0.3
PRAME-204ENST00000403441 SOWAHAQ2M3V2 549 aa13.19□□□□□ -0.3
PRAME-204ENST00000403441 USP39Q53GS9 565 aaKnown RBP13.19□□□□□ -0.3
PRAME-204ENST00000403441 TCEAL6Q6IPX3 200 aa13.19□□□□□ -0.3
PRAME-204ENST00000403441 PSAPL1Q6NUJ1 521 aa13.19□□□□□ -0.3
PRAME-204ENST00000403441 VSTM1Q6UX27 236 aa13.19□□□□□ -0.3
PRAME-204ENST00000403441 STXBP4Q6ZWJ1 553 aa13.19□□□□□ -0.3
PRAME-204ENST00000403441 EPM2AIP1Q7L775 607 aaPredicted RBP13.19□□□□□ -0.3
PRAME-204ENST00000403441 DPH6Q7L8W6 267 aa13.19□□□□□ -0.3
PRAME-204ENST00000403441 OSTM1Q86WC4 334 aa13.19□□□□□ -0.3
PRAME-204ENST00000403441 GPD1LQ8N335 351 aa13.19□□□□□ -0.3
PRAME-204ENST00000403441 ZSWIM2Q8NEG5 633 aa13.19□□□□□ -0.3
PRAME-204ENST00000403441 CXorf38Q8TB03 319 aa13.19□□□□□ -0.3
PRAME-204ENST00000403441 TCEAL3Q969E4 200 aa13.19□□□□□ -0.3
PRAME-204ENST00000403441 HPDLQ96IR7 371 aa13.19□□□□□ -0.3
PRAME-204ENST00000403441 SPATA17Q96L03 361 aa13.19□□□□□ -0.3
PRAME-204ENST00000403441 CEP295NLQ96MC4 621 aa13.19□□□□□ -0.3
PRAME-204ENST00000403441 SYT15Q9BQS2 421 aa13.19□□□□□ -0.3
PRAME-204ENST00000403441 CBWD1Q9BRT8 395 aa13.19□□□□□ -0.3
PRAME-204ENST00000403441 PCIF1Q9H4Z3 704 aa13.19□□□□□ -0.3
PRAME-204ENST00000403441 PANK4Q9NVE7 773 aa13.19□□□□□ -0.3
PRAME-204ENST00000403441 GCNT4Q9P109 453 aa13.19□□□□□ -0.3
PRAME-204ENST00000403441 MAGEC2Q9UBF1 373 aaPredicted RBP13.19□□□□□ -0.3
PRAME-204ENST00000403441 SIX4Q9UIU6 781 aa13.19□□□□□ -0.3
PRAME-204ENST00000403441 CDH9Q9ULB4 789 aa13.19□□□□□ -0.3
PRAME-204ENST00000403441 CHD6Q8TD26 2715 aa13.19□□□□□ -0.3
PRAME-204ENST00000403441 BCLAF3A2AJT9 711 aaKnown RBP13.18□□□□□ -0.3
PRAME-204ENST00000403441 HCRTO43612 131 aa13.18□□□□□ -0.3
PRAME-204ENST00000403441 SLFN14P0C7P3 912 aa13.18□□□□□ -0.3
PRAME-204ENST00000403441 PFKFB1P16118 471 aa13.18□□□□□ -0.3
PRAME-204ENST00000403441 GRIK1P39086 918 aa13.18□□□□□ -0.3
PRAME-204ENST00000403441 SEC13P55735 322 aa13.18□□□□□ -0.3
PRAME-204ENST00000403441 PSMC1P62191 440 aaKnown RBP13.18□□□□□ -0.3
PRAME-204ENST00000403441 AMPD3Q01432 767 aa13.18□□□□□ -0.3
PRAME-204ENST00000403441 CYP27A1Q02318 531 aa13.18□□□□□ -0.3
PRAME-204ENST00000403441 DAB2IPQ5VWQ8 1189 aa13.18□□□□□ -0.3
PRAME-204ENST00000403441 FAM171BQ6P995 826 aa13.18□□□□□ -0.3
PRAME-204ENST00000403441 UNC13DQ70J99 1090 aa13.18□□□□□ -0.3
PRAME-204ENST00000403441 CCDC65Q8IXS2 484 aa13.18□□□□□ -0.3
PRAME-204ENST00000403441 EZH1Q92800 747 aaPredicted RBP13.18□□□□□ -0.3
PRAME-204ENST00000403441 MYLPFQ96A32 169 aa13.18□□□□□ -0.3
PRAME-204ENST00000403441 FAM84AQ96KN4 292 aa13.18□□□□□ -0.3
PRAME-204ENST00000403441 TRPM5Q9NZQ8 1165 aa13.18□□□□□ -0.3
PRAME-204ENST00000403441 USP25Q9UHP3 1055 aa13.18□□□□□ -0.3
PRAME-204ENST00000403441 LAMA1P25391 3075 aa13.18□□□□□ -0.3
PRAME-204ENST00000403441 KIAA1549LQ6ZVL6 1849 aa13.18□□□□□ -0.3
PRAME-204ENST00000403441 CFAP47Q6ZTR5 3102 aa13.17□□□□□ -0.3
PRAME-204ENST00000403441 HELZP42694 1942 aaKnown RBP13.17□□□□□ -0.3
PRAME-204ENST00000403441 ZFHX4Q86UP3 3567 aa13.17□□□□□ -0.3
PRAME-204ENST00000403441 A0A1B0GVL5 298 aa13.17□□□□□ -0.3
PRAME-204ENST00000403441 PVALEFA0A1B0GWK0 134 aa13.17□□□□□ -0.3
PRAME-204ENST00000403441 LNP1A1A4G5 178 aa13.17□□□□□ -0.3
PRAME-204ENST00000403441 ZNF233A6NK53 670 aa13.17□□□□□ -0.3
PRAME-204ENST00000403441 TRIM66O15016 1216 aa13.17□□□□□ -0.3
PRAME-204ENST00000403441 EIF3DO15371 548 aaKnown RBP eCLIP13.17□□□□□ -0.3
PRAME-204ENST00000403441 ATP2C2O75185 946 aa13.17□□□□□ -0.3
PRAME-204ENST00000403441 BDNFP23560 247 aa13.17□□□□□ -0.3
PRAME-204ENST00000403441 HOXD13P35453 343 aa13.17□□□□□ -0.3
PRAME-204ENST00000403441 PPP3CCP48454 512 aa13.17□□□□□ -0.3
PRAME-204ENST00000403441 NOVA1P51513 510 aaKnown RBP13.17□□□□□ -0.3
PRAME-204ENST00000403441 SURF1Q15526 300 aa13.17□□□□□ -0.3
PRAME-204ENST00000403441 DUOXA2Q1HG44 320 aa13.17□□□□□ -0.3
PRAME-204ENST00000403441 C2orf27AQ580R0 203 aa13.17□□□□□ -0.3
PRAME-204ENST00000403441 PMS2CLQ68D20 193 aa13.17□□□□□ -0.3
PRAME-204ENST00000403441 LMBRD2Q68DH5 695 aaPredicted RBP13.17□□□□□ -0.3
PRAME-204ENST00000403441 ANO7Q6IWH7 933 aa13.17□□□□□ -0.3
PRAME-204ENST00000403441 DENND5BQ6ZUT9 1274 aa13.17□□□□□ -0.3
PRAME-204ENST00000403441 CYP2U1Q7Z449 544 aa13.17□□□□□ -0.3
PRAME-204ENST00000403441 GLIS3Q8NEA6 775 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms