RNA–Protein interactions for RNA: ENST00000401921.5

HDAC9-201, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-201ENST00000401921 ASCC2Q9H1I8 757 aaPredicted RBP8.05□□□□□ -1.12
HDAC9-201ENST00000401921 USP18Q9UMW8 372 aa8.05□□□□□ -1.12
HDAC9-201ENST00000401921 MAGED2Q9UNF1 606 aaPredicted RBP8.05□□□□□ -1.12
HDAC9-201ENST00000401921 ATXN2Q99700 1313 aaKnown RBP8.05□□□□□ -1.12
HDAC9-201ENST00000401921 ACKR2O00590 384 aa8.05□□□□□ -1.12
HDAC9-201ENST00000401921 USP2O75604 605 aaPredicted RBP8.05□□□□□ -1.12
HDAC9-201ENST00000401921 TGFB3P10600 412 aa8.05□□□□□ -1.12
HDAC9-201ENST00000401921 INSRRP14616 1297 aa8.05□□□□□ -1.12
HDAC9-201ENST00000401921 NQO1P15559 274 aaKnown RBP8.05□□□□□ -1.12
HDAC9-201ENST00000401921 KDELR1P24390 212 aa8.05□□□□□ -1.12
HDAC9-201ENST00000401921 GEMIN4P57678 1058 aaKnown RBP8.05□□□□□ -1.12
HDAC9-201ENST00000401921 KLF1Q13351 362 aaPredicted RBP8.05□□□□□ -1.12
HDAC9-201ENST00000401921 CCDC6Q16204 474 aa8.05□□□□□ -1.12
HDAC9-201ENST00000401921 ANKRD22Q5VYY1 191 aa8.05□□□□□ -1.12
HDAC9-201ENST00000401921 UNC45BQ8IWX7 931 aa8.05□□□□□ -1.12
HDAC9-201ENST00000401921 EXOC8Q8IYI6 725 aa8.05□□□□□ -1.12
HDAC9-201ENST00000401921 SLCO2A1Q92959 643 aa8.05□□□□□ -1.12
HDAC9-201ENST00000401921 RMDN2Q96LZ7 410 aa8.05□□□□□ -1.12
HDAC9-201ENST00000401921 ZNF518BQ9C0D4 1074 aa8.05□□□□□ -1.12
HDAC9-201ENST00000401921 CDT1Q9H211 546 aa8.05□□□□□ -1.12
HDAC9-201ENST00000401921 PCDH9Q9HC56 1237 aa8.05□□□□□ -1.12
HDAC9-201ENST00000401921 UBN1Q9NPG3 1134 aa8.05□□□□□ -1.12
HDAC9-201ENST00000401921 GPRC5DQ9NZD1 345 aa8.05□□□□□ -1.12
HDAC9-201ENST00000401921 HAO1Q9UJM8 370 aa8.05□□□□□ -1.12
HDAC9-201ENST00000401921 CFAP73A6NFT4 308 aa8.04□□□□□ -1.12
HDAC9-201ENST00000401921 HBP1O60381 514 aa8.04□□□□□ -1.12
HDAC9-201ENST00000401921 LPXNO60711 386 aa8.04□□□□□ -1.12
HDAC9-201ENST00000401921 LRCH4O75427 683 aa8.04□□□□□ -1.12
HDAC9-201ENST00000401921 RASSF9O75901 435 aa8.04□□□□□ -1.12
HDAC9-201ENST00000401921 MICAL2O94851 1124 aa8.04□□□□□ -1.12
HDAC9-201ENST00000401921 ATP6V1G2O95670 118 aa8.04□□□□□ -1.12
HDAC9-201ENST00000401921 PDGFRBP09619 1106 aa8.04□□□□□ -1.12
HDAC9-201ENST00000401921 RPL22P35268 128 aaKnown RBP8.04□□□□□ -1.12
HDAC9-201ENST00000401921 CDKN2BP42772 138 aa8.04□□□□□ -1.12
HDAC9-201ENST00000401921 ERFP50548 548 aa8.04□□□□□ -1.12
HDAC9-201ENST00000401921 GDF10P55107 478 aa8.04□□□□□ -1.12
HDAC9-201ENST00000401921 SESN3P58005 492 aa8.04□□□□□ -1.12
HDAC9-201ENST00000401921 TMEM132DQ14C87 1099 aa8.04□□□□□ -1.12
HDAC9-201ENST00000401921 TMEM63BQ5T3F8 832 aa8.04□□□□□ -1.12
HDAC9-201ENST00000401921 TRIM74Q86UV6 250 aa8.04□□□□□ -1.12
HDAC9-201ENST00000401921 TRIM73Q86UV7 250 aa8.04□□□□□ -1.12
HDAC9-201ENST00000401921 RIOX2Q8IUF8 465 aa8.04□□□□□ -1.12
HDAC9-201ENST00000401921 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.04□□□□□ -1.12
HDAC9-201ENST00000401921 FITM2Q8N6M3 262 aa8.04□□□□□ -1.12
HDAC9-201ENST00000401921 C12orf29Q8N999 325 aa8.04□□□□□ -1.12
HDAC9-201ENST00000401921 SPDYE1Q8NFV5 336 aaPredicted RBP8.04□□□□□ -1.12
HDAC9-201ENST00000401921 RXFP2Q8WXD0 754 aa8.04□□□□□ -1.12
HDAC9-201ENST00000401921 TMEM176AQ96HP8 235 aa8.04□□□□□ -1.12
HDAC9-201ENST00000401921 TMEM237Q96Q45 408 aa8.04□□□□□ -1.12
HDAC9-201ENST00000401921 PAFAH2Q99487 392 aa8.04□□□□□ -1.12
HDAC9-201ENST00000401921 FOXP3Q9BZS1 431 aa8.04□□□□□ -1.12
HDAC9-201ENST00000401921 R3HDMLQ9H3Y0 253 aa8.04□□□□□ -1.12
HDAC9-201ENST00000401921 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.04□□□□□ -1.12
HDAC9-201ENST00000401921 SEPT10Q9P0V9 454 aa8.04□□□□□ -1.12
HDAC9-201ENST00000401921 ATAD5Q96QE3 1844 aa8.04□□□□□ -1.12
HDAC9-201ENST00000401921 COL4A5P29400 1685 aa8.04□□□□□ -1.12
HDAC9-201ENST00000401921 CFAP69A5D8W1 941 aa8.04□□□□□ -1.12
HDAC9-201ENST00000401921 A6NJR5 290 aa8.04□□□□□ -1.12
HDAC9-201ENST00000401921 NDC80O14777 642 aa8.04□□□□□ -1.12
HDAC9-201ENST00000401921 ZNF286BP0CG31 522 aa8.04□□□□□ -1.12
HDAC9-201ENST00000401921 OSBPP22059 807 aa8.04□□□□□ -1.12
HDAC9-201ENST00000401921 ADRA1DP25100 572 aa8.04□□□□□ -1.12
HDAC9-201ENST00000401921 IL1R2P27930 398 aa8.04□□□□□ -1.12
HDAC9-201ENST00000401921 ADORA2BP29275 332 aa8.04□□□□□ -1.12
HDAC9-201ENST00000401921 SDC4P31431 198 aa8.04□□□□□ -1.12
HDAC9-201ENST00000401921 FOXN2P32314 431 aa8.04□□□□□ -1.12
HDAC9-201ENST00000401921 NDST1P52848 882 aa8.04□□□□□ -1.12
HDAC9-201ENST00000401921 MXRA7P84157 204 aa8.04□□□□□ -1.12
HDAC9-201ENST00000401921 PTP4A2Q12974 167 aa8.04□□□□□ -1.12
HDAC9-201ENST00000401921 TFDP2Q14188 446 aa8.04□□□□□ -1.12
HDAC9-201ENST00000401921 KLHL38Q2WGJ6 581 aa8.04□□□□□ -1.12
HDAC9-201ENST00000401921 SH3PXD2AQ5TCZ1 1133 aa8.04□□□□□ -1.12
HDAC9-201ENST00000401921 TRIM68Q6AZZ1 485 aa8.04□□□□□ -1.12
HDAC9-201ENST00000401921 ACOT1Q86TX2 421 aa8.04□□□□□ -1.12
HDAC9-201ENST00000401921 TRABD2AQ86V40 505 aa8.04□□□□□ -1.12
HDAC9-201ENST00000401921 RIBC1Q8N443 379 aaPredicted RBP8.04□□□□□ -1.12
HDAC9-201ENST00000401921 C12orf42Q96LP6 360 aa8.04□□□□□ -1.12
HDAC9-201ENST00000401921 ACAP3Q96P50 834 aa8.04□□□□□ -1.12
HDAC9-201ENST00000401921 RNPEPQ9H4A4 650 aa8.04□□□□□ -1.12
HDAC9-201ENST00000401921 DHX35Q9H5Z1 703 aaKnown RBP8.04□□□□□ -1.12
HDAC9-201ENST00000401921 MINDY3Q9H8M7 445 aa8.04□□□□□ -1.12
HDAC9-201ENST00000401921 WDR35Q9P2L0 1181 aa8.04□□□□□ -1.12
HDAC9-201ENST00000401921 HMGXB4Q9UGU5 601 aa8.04□□□□□ -1.12
HDAC9-201ENST00000401921 CPSF3Q9UKF6 684 aaKnown RBP8.04□□□□□ -1.12
HDAC9-201ENST00000401921 G3BP2Q9UN86 482 aaKnown RBP8.04□□□□□ -1.12
HDAC9-201ENST00000401921 SMG5Q9UPR3 1016 aaKnown RBP8.04□□□□□ -1.12
HDAC9-201ENST00000401921 STYXL1Q9Y6J8 313 aa8.04□□□□□ -1.12
HDAC9-201ENST00000401921 CCDC195A0A1B0GUA6 201 aa8.04□□□□□ -1.12
HDAC9-201ENST00000401921 SIGLEC16A6NMB1 481 aa8.04□□□□□ -1.12
HDAC9-201ENST00000401921 GPR25O00155 361 aa8.04□□□□□ -1.12
HDAC9-201ENST00000401921 DNAJC8O75937 253 aaPredicted RBP8.04□□□□□ -1.12
HDAC9-201ENST00000401921 SETSIPP0DME0 302 aa8.04□□□□□ -1.12
HDAC9-201ENST00000401921 KITP10721 976 aa8.04□□□□□ -1.12
HDAC9-201ENST00000401921 TAC1P20366 129 aa8.04□□□□□ -1.12
HDAC9-201ENST00000401921 GPD1P21695 349 aa8.04□□□□□ -1.12
HDAC9-201ENST00000401921 KLRC2P26717 231 aa8.04□□□□□ -1.12
HDAC9-201ENST00000401921 ICAM3P32942 547 aa8.04□□□□□ -1.12
HDAC9-201ENST00000401921 ELK3P41970 407 aa8.04□□□□□ -1.12
HDAC9-201ENST00000401921 WDR4P57081 412 aaKnown RBP8.04□□□□□ -1.12
HDAC9-201ENST00000401921 ZNF252P-AS1Q0IIN9 211 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms