RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 CCT8L1PA6NM43 557 aa18.89■□□□□ 0.61
COL18A1-204ENST00000400337 KRT34O76011 436 aa18.89■□□□□ 0.61
COL18A1-204ENST00000400337 INPP5AQ14642 412 aa18.89■□□□□ 0.61
COL18A1-204ENST00000400337 SLFN11Q7Z7L1 901 aa18.89■□□□□ 0.61
COL18A1-204ENST00000400337 ARID3BQ8IVW6 561 aaPredicted RBP18.89■□□□□ 0.61
COL18A1-204ENST00000400337 DUSP9Q99956 384 aaKnown RBP18.89■□□□□ 0.61
COL18A1-204ENST00000400337 TRIM45Q9H8W5 580 aaPredicted RBP18.89■□□□□ 0.61
COL18A1-204ENST00000400337 CPA4Q9UI42 421 aa18.89■□□□□ 0.61
COL18A1-204ENST00000400337 PPP2R3BQ9Y5P8 575 aa18.89■□□□□ 0.61
COL18A1-204ENST00000400337 SLC2A3P11169 496 aa18.88■□□□□ 0.61
COL18A1-204ENST00000400337 INSRRP14616 1297 aa18.88■□□□□ 0.61
COL18A1-204ENST00000400337 LRRC23Q53EV4 343 aaPredicted RBP18.88■□□□□ 0.61
COL18A1-204ENST00000400337 MTMR8Q96EF0 704 aa18.88■□□□□ 0.61
COL18A1-204ENST00000400337 NAF1Q96HR8 494 aaKnown RBP18.88■□□□□ 0.61
COL18A1-204ENST00000400337 TEX12Q9BXU0 123 aa18.88■□□□□ 0.61
COL18A1-204ENST00000400337 CDY2AQ9Y6F7 541 aa18.88■□□□□ 0.61
COL18A1-204ENST00000400337 CDY1Q9Y6F8 540 aa18.88■□□□□ 0.61
COL18A1-204ENST00000400337 PLA2G4AP47712 749 aa18.88■□□□□ 0.61
COL18A1-204ENST00000400337 RGS4P49798 205 aa18.88■□□□□ 0.61
COL18A1-204ENST00000400337 SPOCD1Q6ZMY3 1216 aa18.88■□□□□ 0.61
COL18A1-204ENST00000400337 KCNK16Q96T55 309 aa18.88■□□□□ 0.61
COL18A1-204ENST00000400337 LRRIQ3A6PVS8 624 aaPredicted RBP18.88■□□□□ 0.61
COL18A1-204ENST00000400337 RGL2O15211 777 aa18.88■□□□□ 0.61
COL18A1-204ENST00000400337 SERPIND1P05546 499 aa18.88■□□□□ 0.61
COL18A1-204ENST00000400337 SKIV2LQ15477 1246 aaKnown RBP18.88■□□□□ 0.61
COL18A1-204ENST00000400337 SLC5A5Q92911 643 aa18.88■□□□□ 0.61
COL18A1-204ENST00000400337 CNPY3Q9BT09 278 aa18.88■□□□□ 0.61
COL18A1-204ENST00000400337 COLEC11Q9BWP8 271 aa18.88■□□□□ 0.61
COL18A1-204ENST00000400337 BLOC1S4Q9NUP1 217 aa18.88■□□□□ 0.61
COL18A1-204ENST00000400337 SETD4Q9NVD3 440 aa18.88■□□□□ 0.61
COL18A1-204ENST00000400337 ADGRA2Q96PE1 1338 aa18.88■□□□□ 0.61
COL18A1-204ENST00000400337 RHOBTB1O94844 696 aa18.88■□□□□ 0.61
COL18A1-204ENST00000400337 DDNO94850 711 aaPredicted RBP18.88■□□□□ 0.61
COL18A1-204ENST00000400337 LSM8O95777 96 aaKnown RBP18.88■□□□□ 0.61
COL18A1-204ENST00000400337 SOX11P35716 441 aa18.88■□□□□ 0.61
COL18A1-204ENST00000400337 CMTM5Q96DZ9 223 aa18.88■□□□□ 0.61
COL18A1-204ENST00000400337 CINPQ9BW66 212 aaPredicted RBP18.88■□□□□ 0.61
COL18A1-204ENST00000400337 PSD3Q9NYI0 1048 aa18.88■□□□□ 0.61
COL18A1-204ENST00000400337 WHRNQ9P202 907 aa18.88■□□□□ 0.61
COL18A1-204ENST00000400337 VWDEQ8N2E2 1590 aa18.88■□□□□ 0.61
COL18A1-204ENST00000400337 MAPTP10636 758 aaKnown RBP18.87■□□□□ 0.61
COL18A1-204ENST00000400337 RARGP13631 454 aa18.87■□□□□ 0.61
COL18A1-204ENST00000400337 LRRC34Q8IZ02 419 aa18.87■□□□□ 0.61
COL18A1-204ENST00000400337 EXD1Q8NHP7 514 aa18.87■□□□□ 0.61
COL18A1-204ENST00000400337 APOL5Q9BWW9 433 aa18.87■□□□□ 0.61
COL18A1-204ENST00000400337 YY1AP1Q9H869 796 aa18.87■□□□□ 0.61
COL18A1-204ENST00000400337 USP20Q9Y2K6 914 aa18.87■□□□□ 0.61
COL18A1-204ENST00000400337 EML1O00423 815 aa18.87■□□□□ 0.61
COL18A1-204ENST00000400337 ZBTB39O15060 712 aa18.87■□□□□ 0.61
COL18A1-204ENST00000400337 OCA2Q04671 838 aa18.87■□□□□ 0.61
COL18A1-204ENST00000400337 OVGP1Q12889 678 aa18.87■□□□□ 0.61
COL18A1-204ENST00000400337 ADCK2Q7Z695 626 aa18.87■□□□□ 0.61
COL18A1-204ENST00000400337 PRPF39Q86UA1 669 aaKnown RBP18.87■□□□□ 0.61
COL18A1-204ENST00000400337 ABRAQ8N0Z2 381 aa18.87■□□□□ 0.61
COL18A1-204ENST00000400337 HASPINQ8TF76 798 aa18.87■□□□□ 0.61
COL18A1-204ENST00000400337 RXFP2Q8WXD0 754 aa18.87■□□□□ 0.61
COL18A1-204ENST00000400337 GBA2Q9HCG7 927 aaPredicted RBP18.87■□□□□ 0.61
COL18A1-204ENST00000400337 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.87■□□□□ 0.614e-6■■■■■ 47.5
COL18A1-204ENST00000400337 TRIM66O15016 1216 aa18.87■□□□□ 0.61
COL18A1-204ENST00000400337 SEC24DO94855 1032 aaPredicted RBP18.87■□□□□ 0.61
COL18A1-204ENST00000400337 TGFB3P10600 412 aa18.87■□□□□ 0.61
COL18A1-204ENST00000400337 CNGA3Q16281 694 aa18.87■□□□□ 0.61
COL18A1-204ENST00000400337 BLOC1S5Q8TDH9 187 aa18.87■□□□□ 0.61
COL18A1-204ENST00000400337 TCN1P20061 433 aaPredicted RBP18.87■□□□□ 0.61
COL18A1-204ENST00000400337 CPA2P48052 419 aa18.87■□□□□ 0.61
COL18A1-204ENST00000400337 MAP3K7CLP57077 242 aa18.87■□□□□ 0.61
COL18A1-204ENST00000400337 DDR1Q08345 913 aa18.87■□□□□ 0.61
COL18A1-204ENST00000400337 KDM7AQ6ZMT4 941 aa18.87■□□□□ 0.61
COL18A1-204ENST00000400337 CYP3A43Q9HB55 503 aa18.87■□□□□ 0.61
COL18A1-204ENST00000400337 AP4E1Q9UPM8 1137 aa18.87■□□□□ 0.61
COL18A1-204ENST00000400337 H0Y626 953 aa18.87■□□□□ 0.61
COL18A1-204ENST00000400337 DGKIO75912 1065 aa18.87■□□□□ 0.61
COL18A1-204ENST00000400337 F9P00740 461 aa18.87■□□□□ 0.61
COL18A1-204ENST00000400337 THP07101 528 aa18.87■□□□□ 0.61
COL18A1-204ENST00000400337 PRUNE1Q86TP1 453 aa18.87■□□□□ 0.61
COL18A1-204ENST00000400337 ARHGEF19Q8IW93 802 aa18.87■□□□□ 0.61
COL18A1-204ENST00000400337 MCL1Q07820 350 aa18.86■□□□□ 0.61
COL18A1-204ENST00000400337 RRM2BQ7LG56 351 aa18.86■□□□□ 0.61
COL18A1-204ENST00000400337 PPP2R3CQ969Q6 453 aa18.86■□□□□ 0.61
COL18A1-204ENST00000400337 SLC35C1Q96A29 364 aa18.86■□□□□ 0.61
COL18A1-204ENST00000400337 CDC42EP4Q9H3Q1 356 aaKnown RBP18.86■□□□□ 0.61
COL18A1-204ENST00000400337 L1RE1Q9UN81 338 aa18.86■□□□□ 0.61
COL18A1-204ENST00000400337 HNRNPCL2B2RXH8 293 aa18.86■□□□□ 0.61
COL18A1-204ENST00000400337 SMIM22K7EJ46 135 aa18.86■□□□□ 0.61
COL18A1-204ENST00000400337 ZSCAN9O15535 394 aaPredicted RBP18.86■□□□□ 0.61
COL18A1-204ENST00000400337 CDH18Q13634 790 aa18.86■□□□□ 0.61
COL18A1-204ENST00000400337 CYTH1Q15438 398 aa18.86■□□□□ 0.61
COL18A1-204ENST00000400337 C16orf89Q6UX73 402 aa18.86■□□□□ 0.61
COL18A1-204ENST00000400337 KCNK18Q7Z418 384 aa18.86■□□□□ 0.61
COL18A1-204ENST00000400337 PCYOX1LQ8NBM8 494 aa18.86■□□□□ 0.61
COL18A1-204ENST00000400337 TMEM169Q96HH4 297 aa18.86■□□□□ 0.61
COL18A1-204ENST00000400337 EIF2AQ9BY44 585 aaKnown RBP18.86■□□□□ 0.61
COL18A1-204ENST00000400337 CHCHD3Q9NX63 227 aaKnown RBP18.86■□□□□ 0.61
COL18A1-204ENST00000400337 STX7O15400 261 aaKnown RBP18.86■□□□□ 0.61
COL18A1-204ENST00000400337 H2AFXP16104 143 aaPredicted RBP18.86■□□□□ 0.61
COL18A1-204ENST00000400337 SLC11A2P49281 568 aa18.86■□□□□ 0.61
COL18A1-204ENST00000400337 GEMP55040 296 aa18.86■□□□□ 0.61
COL18A1-204ENST00000400337 CATSPER1Q8NEC5 780 aa18.86■□□□□ 0.61
COL18A1-204ENST00000400337 FBXO32Q969P5 355 aa18.86■□□□□ 0.61
COL18A1-204ENST00000400337 PPLO60437 1756 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms