RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 S100A13Q99584 98 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 PIN4Q9Y237 131 aaKnown RBP2.83□□□□□ -1.96
CHD9-202ENST00000398510 PCDHA5Q9Y5H7 936 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 ATRNL1Q5VV63 1379 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 NRCAMQ92823 1304 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 PVALEFA0A1B0GWK0 134 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 LRRC53A6NM62 1247 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 MGRN1O60291 552 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 E2F6O75461 281 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 STX11O75558 287 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 ERBB2P04626 1255 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 THP07101 528 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 ACTR3P61158 418 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 SPDYE7PQ495Y7 208 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 ARMC3Q5W041 872 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 SLC30A8Q8IWU4 369 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 TEX9Q8N6V9 391 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 SLC22A17Q8WUG5 538 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 PTPRN2Q92932 1015 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 SERAC1Q96JX3 654 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 TBCBQ99426 244 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 C11orf84Q9BUA3 381 aaPredicted RBP2.83□□□□□ -1.96
CHD9-202ENST00000398510 PRKD2Q9BZL6 878 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 LGR6Q9HBX8 967 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 THUMPD1Q9NXG2 353 aaKnown RBP2.83□□□□□ -1.96
CHD9-202ENST00000398510 RBAKQ9NYW8 714 aaPredicted RBP2.83□□□□□ -1.96
CHD9-202ENST00000398510 ARHGAP28Q9P2N2 729 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 RPS6KB2Q9UBS0 482 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 GLS2Q9UI32 602 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 RGS20O76081 388 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 ICAM1P05362 532 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 ITGA4P13612 1032 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 ENDOUP21128 410 aaKnown RBP2.83□□□□□ -1.96
CHD9-202ENST00000398510 CDC25CP30307 473 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 CASP2P42575 452 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 IRX1P78414 480 aaPredicted RBP2.83□□□□□ -1.96
CHD9-202ENST00000398510 ART3Q13508 389 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 SLC39A14Q15043 492 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 HIF1AQ16665 826 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 ATAD3BQ5T9A4 648 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 TATDN1Q6P1N9 297 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 POTEEQ6S8J3 1075 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 RTL10Q7L3V2 364 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 SHCBP1Q8NEM2 672 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 DPF2Q92785 391 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 B3GALT6Q96L58 329 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 CAPS2Q9BXY5 557 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 LDHAL6BQ9BYZ2 381 aaPredicted RBP2.83□□□□□ -1.96
CHD9-202ENST00000398510 NDST4Q9H3R1 872 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 C3orf14Q9HBI5 128 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 DNAJC28Q9NX36 388 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 COPS7AQ9UBW8 275 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 RALGAPA2Q2PPJ7 1873 aa2.83□□□□□ -1.96
CHD9-202ENST00000398510 CFAP73A6NFT4 308 aa2.82□□□□□ -1.96
CHD9-202ENST00000398510 SLC28A2O43868 658 aa2.82□□□□□ -1.96
CHD9-202ENST00000398510 MFAP3LO75121 409 aa2.82□□□□□ -1.96
CHD9-202ENST00000398510 IGHEP01854 428 aa2.82□□□□□ -1.96
CHD9-202ENST00000398510 ATP6V1C1P21283 382 aa2.82□□□□□ -1.96
CHD9-202ENST00000398510 RRM2P31350 389 aa2.82□□□□□ -1.96
CHD9-202ENST00000398510 NEK2P51955 445 aa2.82□□□□□ -1.96
CHD9-202ENST00000398510 ITGA1P56199 1179 aa2.82□□□□□ -1.96
CHD9-202ENST00000398510 IL1RL1Q01638 556 aa2.82□□□□□ -1.96
CHD9-202ENST00000398510 OCA2Q04671 838 aa2.82□□□□□ -1.96
CHD9-202ENST00000398510 CBX3Q13185 183 aa2.82□□□□□ -1.96
CHD9-202ENST00000398510 HLA-DQA1Q5Y7H0 255 aa2.82□□□□□ -1.96
CHD9-202ENST00000398510 RETSATQ6NUM9 610 aa2.82□□□□□ -1.96
CHD9-202ENST00000398510 NOP9Q86U38 636 aaKnown RBP2.82□□□□□ -1.96
CHD9-202ENST00000398510 DCLK2Q8N568 766 aa2.82□□□□□ -1.96
CHD9-202ENST00000398510 P2RX5Q93086 422 aa2.82□□□□□ -1.96
CHD9-202ENST00000398510 TMEM159Q96B96 161 aa2.82□□□□□ -1.96
CHD9-202ENST00000398510 THOC1Q96FV9 657 aaKnown RBP2.82□□□□□ -1.96
CHD9-202ENST00000398510 MRPS26Q9BYN8 205 aaKnown RBP2.82□□□□□ -1.96
CHD9-202ENST00000398510 TRIM8Q9BZR9 551 aa2.82□□□□□ -1.96
CHD9-202ENST00000398510 LSG1Q9H089 658 aaKnown RBP2.82□□□□□ -1.96
CHD9-202ENST00000398510 GANQ9H2C0 597 aa2.82□□□□□ -1.96
CHD9-202ENST00000398510 SEC31BQ9NQW1 1179 aa2.82□□□□□ -1.96
CHD9-202ENST00000398510 ZBTB40Q9NUA8 1239 aa2.82□□□□□ -1.96
CHD9-202ENST00000398510 NFKBIL1Q9UBC1 381 aaPredicted RBP2.82□□□□□ -1.96
CHD9-202ENST00000398510 CKLFQ9UBR5 152 aa2.82□□□□□ -1.96
CHD9-202ENST00000398510 ZC3H7BQ9UGR2 993 aaKnown RBP2.82□□□□□ -1.96
CHD9-202ENST00000398510 PCDHGB5Q9Y5G0 923 aa2.82□□□□□ -1.96
CHD9-202ENST00000398510 VGLL3A8MV65 326 aa2.82□□□□□ -1.96
CHD9-202ENST00000398510 TEX46H3BTG2 121 aa2.82□□□□□ -1.96
CHD9-202ENST00000398510 VEGFDO43915 354 aa2.82□□□□□ -1.96
CHD9-202ENST00000398510 CEP104O60308 925 aa2.82□□□□□ -1.96
CHD9-202ENST00000398510 RTN2O75298 545 aa2.82□□□□□ -1.96
CHD9-202ENST00000398510 SOAT2O75908 522 aa2.82□□□□□ -1.96
CHD9-202ENST00000398510 UBXN7O94888 489 aa2.82□□□□□ -1.96
CHD9-202ENST00000398510 ANP32DO95626 131 aa2.82□□□□□ -1.96
CHD9-202ENST00000398510 CYP2A7P20853 494 aa2.82□□□□□ -1.96
CHD9-202ENST00000398510 TALDO1P37837 337 aa2.82□□□□□ -1.96
CHD9-202ENST00000398510 IRF5Q13568 498 aa2.82□□□□□ -1.96
CHD9-202ENST00000398510 IKBKEQ14164 716 aa2.82□□□□□ -1.96
CHD9-202ENST00000398510 SPARCL1Q14515 664 aa2.82□□□□□ -1.96
CHD9-202ENST00000398510 SNCBQ16143 134 aa2.82□□□□□ -1.96
CHD9-202ENST00000398510 ATP13A5Q4VNC0 1218 aa2.82□□□□□ -1.96
CHD9-202ENST00000398510 CCDC157Q569K6 752 aa2.82□□□□□ -1.96
CHD9-202ENST00000398510 HSP90AA4PQ58FG1 418 aa2.82□□□□□ -1.96
CHD9-202ENST00000398510 FBXW10Q5XX13 1052 aa2.82□□□□□ -1.96
CHD9-202ENST00000398510 FAM45BPQ6NSW5 357 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms