RNA–Protein interactions for RNA: ENST00000397728.7

LSS-202, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 4,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-202ENST00000397728 FIGNQ5HY92 759 aa16.05■□□□□ 0.16
LSS-202ENST00000397728 C6orf118Q5T5N4 469 aa16.05■□□□□ 0.16
LSS-202ENST00000397728 ZNF571Q7Z3V5 609 aaPredicted RBP16.05■□□□□ 0.16
LSS-202ENST00000397728 DNAAF5Q86Y56 855 aa16.05■□□□□ 0.16
LSS-202ENST00000397728 CACNA2D3Q8IZS8 1091 aa16.05■□□□□ 0.16
LSS-202ENST00000397728 ULK4Q96C45 1275 aa16.05■□□□□ 0.16
LSS-202ENST00000397728 AP4E1Q9UPM8 1137 aa16.05■□□□□ 0.16
LSS-202ENST00000397728 SLC45A1Q9Y2W3 748 aa16.05■□□□□ 0.16
LSS-202ENST00000397728 MTSS1O43312 755 aa16.04■□□□□ 0.16
LSS-202ENST00000397728 PTPN1P18031 435 aaKnown RBP16.04■□□□□ 0.16
LSS-202ENST00000397728 CCR1P32246 355 aa16.04■□□□□ 0.16
LSS-202ENST00000397728 TNFRSF25Q93038 417 aa16.04■□□□□ 0.16
LSS-202ENST00000397728 UROC1Q96N76 676 aa16.04■□□□□ 0.16
LSS-202ENST00000397728 PACSIN1Q9BY11 444 aa16.04■□□□□ 0.16
LSS-202ENST00000397728 COL1A1P02452 1464 aaPredicted RBP16.04■□□□□ 0.16
LSS-202ENST00000397728 RASA4BC9J798 803 aa16.04■□□□□ 0.16
LSS-202ENST00000397728 RASA4O43374 803 aa16.04■□□□□ 0.16
LSS-202ENST00000397728 OXCT1P55809 520 aa16.04■□□□□ 0.16
LSS-202ENST00000397728 TBX4P57082 545 aa16.04■□□□□ 0.16
LSS-202ENST00000397728 RBM43Q6ZSC3 357 aaKnown RBP16.04■□□□□ 0.16
LSS-202ENST00000397728 TRIM54Q9BYV2 358 aa16.04■□□□□ 0.16
LSS-202ENST00000397728 MAF1Q9H063 256 aa16.04■□□□□ 0.16
LSS-202ENST00000397728 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.04■□□□□ 0.16
LSS-202ENST00000397728 CBX4O00257 560 aa16.04■□□□□ 0.16
LSS-202ENST00000397728 EFCAB14O75071 495 aa16.04■□□□□ 0.16
LSS-202ENST00000397728 ADH1AP07327 375 aa16.04■□□□□ 0.16
LSS-202ENST00000397728 LLGL2Q6P1M3 1020 aa16.04■□□□□ 0.16
LSS-202ENST00000397728 CCDC149Q6ZUS6 474 aa16.04■□□□□ 0.16
LSS-202ENST00000397728 SH3RF1Q7Z6J0 888 aa16.04■□□□□ 0.16
LSS-202ENST00000397728 HERC6Q8IVU3 1022 aa16.04■□□□□ 0.16
LSS-202ENST00000397728 CREBZFQ9NS37 354 aa16.04■□□□□ 0.16
LSS-202ENST00000397728 SMARCAL1Q9NZC9 954 aa16.04■□□□□ 0.16
LSS-202ENST00000397728 UXTQ9UBK9 157 aaPredicted RBP16.04■□□□□ 0.16
LSS-202ENST00000397728 PLAAQ9Y263 795 aa16.04■□□□□ 0.16
LSS-202ENST00000397728 TSPAN3O60637 253 aa16.04■□□□□ 0.16
LSS-202ENST00000397728 MICAL2O94851 1124 aa16.04■□□□□ 0.16
LSS-202ENST00000397728 RTN3O95197 1032 aaPredicted RBP16.04■□□□□ 0.16
LSS-202ENST00000397728 CASP2P42575 452 aa16.04■□□□□ 0.16
LSS-202ENST00000397728 KPNA1P52294 538 aaPredicted RBP16.04■□□□□ 0.16
LSS-202ENST00000397728 TLE2Q04725 743 aa16.04■□□□□ 0.16
LSS-202ENST00000397728 GRIK3Q13003 919 aa16.04■□□□□ 0.16
LSS-202ENST00000397728 NNTQ13423 1086 aa16.04■□□□□ 0.16
LSS-202ENST00000397728 NT5DC1Q5TFE4 455 aa16.04■□□□□ 0.16
LSS-202ENST00000397728 ANKS3Q6ZW76 656 aa16.04■□□□□ 0.16
LSS-202ENST00000397728 UNC45BQ8IWX7 931 aa16.04■□□□□ 0.16
LSS-202ENST00000397728 SRRM1Q8IYB3 904 aaKnown RBP16.04■□□□□ 0.16
LSS-202ENST00000397728 LRRC43Q8N309 656 aa16.04■□□□□ 0.16
LSS-202ENST00000397728 ZNF112Q9UJU3 913 aa16.04■□□□□ 0.16
LSS-202ENST00000397728 TTI1O43156 1089 aa16.03■□□□□ 0.16
LSS-202ENST00000397728 PSMD3O43242 534 aa16.03■□□□□ 0.16
LSS-202ENST00000397728 TYK2P29597 1187 aa16.03■□□□□ 0.16
LSS-202ENST00000397728 MAP7Q14244 749 aa16.03■□□□□ 0.16
LSS-202ENST00000397728 CCNYL1Q8N7R7 359 aa16.03■□□□□ 0.16
LSS-202ENST00000397728 FAM71DQ8N9W8 422 aa16.03■□□□□ 0.16
LSS-202ENST00000397728 OLA1Q9NTK5 396 aaKnown RBP16.03■□□□□ 0.16
LSS-202ENST00000397728 PCDHA2Q9Y5H9 948 aa16.03■□□□□ 0.16
LSS-202ENST00000397728 USP17L7P0C7H9 530 aa16.03■□□□□ 0.16
LSS-202ENST00000397728 PMS2P54278 862 aa16.03■□□□□ 0.16
LSS-202ENST00000397728 CASP8Q14790 479 aa16.03■□□□□ 0.16
LSS-202ENST00000397728 NCAPHQ15003 741 aa16.03■□□□□ 0.16
LSS-202ENST00000397728 CTU1Q7Z7A3 348 aaKnown RBP16.03■□□□□ 0.16
LSS-202ENST00000397728 OR5B17Q8NGF7 314 aa16.03■□□□□ 0.16
LSS-202ENST00000397728 KAT5Q92993 513 aa16.03■□□□□ 0.16
LSS-202ENST00000397728 CDK5RAP1Q96SZ6 601 aaKnown RBP16.03■□□□□ 0.16
LSS-202ENST00000397728 DNAJC7Q99615 494 aa16.03■□□□□ 0.16
LSS-202ENST00000397728 TRIM51Q9BSJ1 452 aa16.03■□□□□ 0.16
LSS-202ENST00000397728 PAK5Q9P286 719 aa16.03■□□□□ 0.16
LSS-202ENST00000397728 IGLV3-22A0A075B6J6 115 aa16.03■□□□□ 0.16
LSS-202ENST00000397728 GRM5P41594 1212 aa16.03■□□□□ 0.16
LSS-202ENST00000397728 BRCC3P46736 316 aa16.03■□□□□ 0.16
LSS-202ENST00000397728 PPIGQ13427 754 aaKnown RBP eCLIP16.03■□□□□ 0.165e-12■■■□□ 16.1
LSS-202ENST00000397728 TPCN2Q8NHX9 752 aa16.03■□□□□ 0.16
LSS-202ENST00000397728 USP18Q9UMW8 372 aa16.03■□□□□ 0.16
LSS-202ENST00000397728 SYNCRIPO60506 623 aaKnown RBP16.02■□□□□ 0.16
LSS-202ENST00000397728 RNASEH1O60930 286 aaKnown RBP16.02■□□□□ 0.16
LSS-202ENST00000397728 PAEPP09466 180 aa16.02■□□□□ 0.16
LSS-202ENST00000397728 ARHGAP25P42331 645 aa16.02■□□□□ 0.16
LSS-202ENST00000397728 PSMD5Q16401 504 aa16.02■□□□□ 0.16
LSS-202ENST00000397728 CLEC16AQ2KHT3 1053 aa16.02■□□□□ 0.16
LSS-202ENST00000397728 CORO1BQ9BR76 489 aa16.02■□□□□ 0.16
LSS-202ENST00000397728 C2CD2Q9Y426 696 aa16.02■□□□□ 0.16
LSS-202ENST00000397728 AP3B1O00203 1094 aa16.02■□□□□ 0.16
LSS-202ENST00000397728 PHF2O75151 1096 aa16.02■□□□□ 0.16
LSS-202ENST00000397728 NDUFS3O75489 264 aa16.02■□□□□ 0.16
LSS-202ENST00000397728 CXCL14O95715 111 aa16.02■□□□□ 0.16
LSS-202ENST00000397728 NPLOC4Q8TAT6 608 aa16.02■□□□□ 0.16
LSS-202ENST00000397728 BCAS4Q8TDM0 211 aa16.02■□□□□ 0.16
LSS-202ENST00000397728 TFB1MQ8WVM0 346 aaKnown RBP16.02■□□□□ 0.16
LSS-202ENST00000397728 ULBP1Q9BZM6 244 aa16.02■□□□□ 0.16
LSS-202ENST00000397728 CERS4Q9HA82 394 aa16.02■□□□□ 0.16
LSS-202ENST00000397728 SLC25A13Q9UJS0 675 aa16.02■□□□□ 0.16
LSS-202ENST00000397728 FBXL21Q9UKT6 434 aa16.02■□□□□ 0.16
LSS-202ENST00000397728 MRPS23Q9Y3D9 190 aaKnown RBP16.02■□□□□ 0.16
LSS-202ENST00000397728 ASTN1O14525 1302 aa16.02■□□□□ 0.16
LSS-202ENST00000397728 A0A087WUV0 522 aaPredicted RBP16.02■□□□□ 0.16
LSS-202ENST00000397728 SOCS7O14512 581 aa16.02■□□□□ 0.16
LSS-202ENST00000397728 SCAMP3O14828 347 aaKnown RBP16.02■□□□□ 0.16
LSS-202ENST00000397728 ZNF862O60290 1169 aa16.02■□□□□ 0.16
LSS-202ENST00000397728 TUSC3Q13454 348 aa16.02■□□□□ 0.16
LSS-202ENST00000397728 PABPC1LQ4VXU2 614 aaKnown RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms