RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 BAP1Q92560 729 aa8.65□□□□□ -1.02
PTPRD-204ENST00000397606 FAXDC2Q96IV6 333 aa8.65□□□□□ -1.02
PTPRD-204ENST00000397606 PARD6BQ9BYG5 372 aa8.65□□□□□ -1.02
PTPRD-204ENST00000397606 SPG21Q9NZD8 308 aa8.65□□□□□ -1.02
PTPRD-204ENST00000397606 ANKRD31Q8N7Z5 1873 aa8.65□□□□□ -1.02
PTPRD-204ENST00000397606 GIPC1O14908 333 aa8.65□□□□□ -1.02
PTPRD-204ENST00000397606 MTSS1O43312 755 aa8.65□□□□□ -1.02
PTPRD-204ENST00000397606 CST8O60676 142 aa8.65□□□□□ -1.02
PTPRD-204ENST00000397606 IRF1P10914 325 aa8.65□□□□□ -1.02
PTPRD-204ENST00000397606 MBL2P11226 248 aaPredicted RBP8.65□□□□□ -1.02
PTPRD-204ENST00000397606 CCDC130P13994 396 aa8.65□□□□□ -1.02
PTPRD-204ENST00000397606 EPHB2P29323 1055 aa8.65□□□□□ -1.02
PTPRD-204ENST00000397606 LBX1P52954 281 aa8.65□□□□□ -1.02
PTPRD-204ENST00000397606 THOC5Q13769 683 aaKnown RBP8.65□□□□□ -1.02
PTPRD-204ENST00000397606 HHATQ5VTY9 493 aa8.65□□□□□ -1.02
PTPRD-204ENST00000397606 C11orf63Q6NUN7 778 aa8.65□□□□□ -1.02
PTPRD-204ENST00000397606 FAM43BQ6ZT52 329 aaPredicted RBP8.65□□□□□ -1.02
PTPRD-204ENST00000397606 SLFN11Q7Z7L1 901 aa8.65□□□□□ -1.02
PTPRD-204ENST00000397606 FAM228AQ86W67 206 aa8.65□□□□□ -1.02
PTPRD-204ENST00000397606 C7orf61Q8IZ16 206 aa8.65□□□□□ -1.02
PTPRD-204ENST00000397606 ATPAF2Q8N5M1 289 aa8.65□□□□□ -1.02
PTPRD-204ENST00000397606 ANKRD52Q8NB46 1076 aa8.65□□□□□ -1.02
PTPRD-204ENST00000397606 UHMK1Q8TAS1 419 aaKnown RBP8.65□□□□□ -1.02
PTPRD-204ENST00000397606 ZBTB9Q96C00 473 aa8.65□□□□□ -1.02
PTPRD-204ENST00000397606 TRIM7Q9C029 511 aa8.65□□□□□ -1.02
PTPRD-204ENST00000397606 TNS1Q9HBL0 1735 aaKnown RBP8.65□□□□□ -1.02
PTPRD-204ENST00000397606 ARL5CA6NH57 179 aa8.65□□□□□ -1.02
PTPRD-204ENST00000397606 I3L4J1 428 aa8.65□□□□□ -1.02
PTPRD-204ENST00000397606 EPHB6O15197 1021 aa8.65□□□□□ -1.02
PTPRD-204ENST00000397606 HNRNPH3P31942 346 aaKnown RBP8.65□□□□□ -1.02
PTPRD-204ENST00000397606 AVPR1AP37288 418 aa8.65□□□□□ -1.02
PTPRD-204ENST00000397606 GPS1Q13098 491 aa8.65□□□□□ -1.02
PTPRD-204ENST00000397606 SEPT6Q14141 434 aa8.65□□□□□ -1.02
PTPRD-204ENST00000397606 C3orf20Q8ND61 904 aa8.65□□□□□ -1.02
PTPRD-204ENST00000397606 TFR2Q9UP52 801 aa8.65□□□□□ -1.02
PTPRD-204ENST00000397606 COL11A2P13942 1736 aaPredicted RBP8.65□□□□□ -1.02
PTPRD-204ENST00000397606 ADGRA3Q8IWK6 1321 aa8.65□□□□□ -1.03
PTPRD-204ENST00000397606 COL6A1P12109 1028 aa8.65□□□□□ -1.03
PTPRD-204ENST00000397606 SLC6A3Q01959 620 aa8.65□□□□□ -1.03
PTPRD-204ENST00000397606 EFEMP1Q12805 493 aa8.65□□□□□ -1.03
PTPRD-204ENST00000397606 PDCLQ13371 301 aa8.65□□□□□ -1.03
PTPRD-204ENST00000397606 OTOP2Q7RTS6 562 aa8.65□□□□□ -1.03
PTPRD-204ENST00000397606 SERINC5Q86VE9 423 aa8.65□□□□□ -1.03
PTPRD-204ENST00000397606 SEMA4DQ92854 862 aa8.65□□□□□ -1.03
PTPRD-204ENST00000397606 PAWRQ96IZ0 340 aaKnown RBP8.65□□□□□ -1.03
PTPRD-204ENST00000397606 TBCBQ99426 244 aa8.65□□□□□ -1.03
PTPRD-204ENST00000397606 TTPALQ9BTX7 342 aa8.65□□□□□ -1.03
PTPRD-204ENST00000397606 OXCT2Q9BYC2 517 aaPredicted RBP8.65□□□□□ -1.03
PTPRD-204ENST00000397606 MYH6P13533 1939 aa8.65□□□□□ -1.03
PTPRD-204ENST00000397606 PHF2O75151 1096 aa8.64□□□□□ -1.03
PTPRD-204ENST00000397606 PPP1R37O75864 691 aa8.64□□□□□ -1.03
PTPRD-204ENST00000397606 ADH1AP07327 375 aa8.64□□□□□ -1.03
PTPRD-204ENST00000397606 PAMP19021 973 aa8.64□□□□□ -1.03
PTPRD-204ENST00000397606 CYP2C18P33260 490 aa8.64□□□□□ -1.03
PTPRD-204ENST00000397606 PPARGP37231 505 aaPredicted RBP8.64□□□□□ -1.03
PTPRD-204ENST00000397606 PDE1BQ01064 536 aa8.64□□□□□ -1.03
PTPRD-204ENST00000397606 ACAP1Q15027 740 aa8.64□□□□□ -1.03
PTPRD-204ENST00000397606 PABPC1LQ4VXU2 614 aaKnown RBP8.64□□□□□ -1.03
PTPRD-204ENST00000397606 CPLX4Q7Z7G2 160 aa8.64□□□□□ -1.03
PTPRD-204ENST00000397606 EMC1Q8N766 993 aa8.64□□□□□ -1.03
PTPRD-204ENST00000397606 GOLPH3Q9H4A6 298 aa8.64□□□□□ -1.03
PTPRD-204ENST00000397606 MINDY3Q9H8M7 445 aa8.64□□□□□ -1.03
PTPRD-204ENST00000397606 OSGEPQ9NPF4 335 aa8.64□□□□□ -1.03
PTPRD-204ENST00000397606 BFARQ9NZS9 450 aa8.64□□□□□ -1.03
PTPRD-204ENST00000397606 GNEQ9Y223 722 aaKnown RBP8.64□□□□□ -1.03
PTPRD-204ENST00000397606 DUSP10Q9Y6W6 482 aa8.64□□□□□ -1.03
PTPRD-204ENST00000397606 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.64□□□□□ -1.03
PTPRD-204ENST00000397606 SLC12A8A0AV02 714 aa8.64□□□□□ -1.03
PTPRD-204ENST00000397606 BRCC3P46736 316 aa8.64□□□□□ -1.03
PTPRD-204ENST00000397606 PSMD5Q16401 504 aa8.64□□□□□ -1.03
PTPRD-204ENST00000397606 ACCSLQ4AC99 568 aa8.64□□□□□ -1.03
PTPRD-204ENST00000397606 RABGAP1LQ5R372 815 aa8.64□□□□□ -1.03
PTPRD-204ENST00000397606 PPM1LQ5SGD2 360 aa8.64□□□□□ -1.03
PTPRD-204ENST00000397606 ECHDC2Q86YB7 292 aa8.64□□□□□ -1.03
PTPRD-204ENST00000397606 UNC45BQ8IWX7 931 aa8.64□□□□□ -1.03
PTPRD-204ENST00000397606 CCDC13Q8IYE1 715 aa8.64□□□□□ -1.03
PTPRD-204ENST00000397606 SPATA18Q8TC71 538 aa8.64□□□□□ -1.03
PTPRD-204ENST00000397606 SCLYQ96I15 445 aa8.64□□□□□ -1.03
PTPRD-204ENST00000397606 PPP1R2P1Q96PQ5 205 aa8.64□□□□□ -1.03
PTPRD-204ENST00000397606 MAGEB5Q9BZ81 275 aa8.64□□□□□ -1.03
PTPRD-204ENST00000397606 GOLGA2P5Q9HBQ8 144 aa8.64□□□□□ -1.03
PTPRD-204ENST00000397606 USP18Q9UMW8 372 aa8.64□□□□□ -1.03
PTPRD-204ENST00000397606 DOCK2Q92608 1830 aa8.64□□□□□ -1.03
PTPRD-204ENST00000397606 A0A0U1RQF3 1178 aa8.64□□□□□ -1.03
PTPRD-204ENST00000397606 E5RJQ4 531 aa8.64□□□□□ -1.03
PTPRD-204ENST00000397606 F5H5T6 163 aa8.64□□□□□ -1.03
PTPRD-204ENST00000397606 POC1B-GALNT4F8VUJ3 575 aa8.64□□□□□ -1.03
PTPRD-204ENST00000397606 F8W8V4 182 aa8.64□□□□□ -1.03
PTPRD-204ENST00000397606 AP3B1O00203 1094 aa8.64□□□□□ -1.03
PTPRD-204ENST00000397606 PMM2O15305 246 aa8.64□□□□□ -1.03
PTPRD-204ENST00000397606 CKBP12277 381 aa8.64□□□□□ -1.03
PTPRD-204ENST00000397606 CCR1P32246 355 aa8.64□□□□□ -1.03
PTPRD-204ENST00000397606 RFC2P35250 354 aa8.64□□□□□ -1.03
PTPRD-204ENST00000397606 ST8SIA6P61647 398 aa8.64□□□□□ -1.03
PTPRD-204ENST00000397606 CENPCQ03188 943 aa8.64□□□□□ -1.03
PTPRD-204ENST00000397606 TRIM32Q13049 653 aa8.64□□□□□ -1.03
PTPRD-204ENST00000397606 BIRC2Q13490 618 aa8.64□□□□□ -1.03
PTPRD-204ENST00000397606 BYSLQ13895 437 aaKnown RBP8.64□□□□□ -1.03
PTPRD-204ENST00000397606 CFAP157Q5JU67 520 aa8.64□□□□□ -1.03
PTPRD-204ENST00000397606 PSRC1Q6PGN9 363 aaPredicted RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms