RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 USP46P62068 366 aa22.45■■□□□ 1.18
TSPAN4-206ENST00000397408 IFRD2Q12894 506 aaPredicted RBP22.45■■□□□ 1.18
TSPAN4-206ENST00000397408 IQCB1Q15051 598 aa22.45■■□□□ 1.18
TSPAN4-206ENST00000397408 ARHGAP15Q53QZ3 475 aa22.45■■□□□ 1.18
TSPAN4-206ENST00000397408 FKBP15Q5T1M5 1219 aa22.45■■□□□ 1.18
TSPAN4-206ENST00000397408 ARHGAP17Q68EM7 881 aa22.45■■□□□ 1.18
TSPAN4-206ENST00000397408 TMEM150AQ86TG1 271 aa22.45■■□□□ 1.18
TSPAN4-206ENST00000397408 JAKMIP2Q96AA8 810 aa22.45■■□□□ 1.18
TSPAN4-206ENST00000397408 FAM81BQ96LP2 452 aa22.45■■□□□ 1.18
TSPAN4-206ENST00000397408 KCNK12Q9HB15 430 aa22.45■■□□□ 1.18
TSPAN4-206ENST00000397408 CSNK1G1Q9HCP0 422 aa22.45■■□□□ 1.18
TSPAN4-206ENST00000397408 TADA3O75528 432 aa22.44■■□□□ 1.18
TSPAN4-206ENST00000397408 F11P03951 625 aa22.44■■□□□ 1.18
TSPAN4-206ENST00000397408 PAEPP09466 180 aa22.44■■□□□ 1.18
TSPAN4-206ENST00000397408 KRT5P13647 590 aa22.44■■□□□ 1.18
TSPAN4-206ENST00000397408 NPR3P17342 541 aa22.44■■□□□ 1.18
TSPAN4-206ENST00000397408 SLC5A3P53794 718 aa22.44■■□□□ 1.18
TSPAN4-206ENST00000397408 KCNMA1Q12791 1236 aa22.44■■□□□ 1.18
TSPAN4-206ENST00000397408 HTR4Q13639 388 aa22.44■■□□□ 1.18
TSPAN4-206ENST00000397408 PTPN21Q16825 1174 aa22.44■■□□□ 1.18
TSPAN4-206ENST00000397408 SGO2Q562F6 1265 aa22.44■■□□□ 1.18
TSPAN4-206ENST00000397408 GPR158Q5T848 1215 aa22.44■■□□□ 1.18
TSPAN4-206ENST00000397408 CLEC20AQ6ZU45 233 aa22.44■■□□□ 1.18
TSPAN4-206ENST00000397408 RSAD2Q8WXG1 361 aa22.44■■□□□ 1.18
TSPAN4-206ENST00000397408 ZSWIM3Q96MP5 696 aa22.44■■□□□ 1.18
TSPAN4-206ENST00000397408 LSM14BQ9BX40 385 aaKnown RBP22.44■■□□□ 1.18
TSPAN4-206ENST00000397408 CBX8Q9HC52 389 aa22.44■■□□□ 1.18
TSPAN4-206ENST00000397408 EHD2Q9NZN4 543 aa22.44■■□□□ 1.18
TSPAN4-206ENST00000397408 IGSF9Q9P2J2 1179 aa22.44■■□□□ 1.18
TSPAN4-206ENST00000397408 NUMBLQ9Y6R0 609 aa22.44■■□□□ 1.18
TSPAN4-206ENST00000397408 LGALS16A8MUM7 142 aa22.43■■□□□ 1.18
TSPAN4-206ENST00000397408 ANHXE9PGG2 379 aa22.43■■□□□ 1.18
TSPAN4-206ENST00000397408 RNF225M0QZC1 329 aaPredicted RBP22.43■■□□□ 1.18
TSPAN4-206ENST00000397408 VDRP11473 427 aa22.43■■□□□ 1.18
TSPAN4-206ENST00000397408 ZNF132P52740 706 aa22.43■■□□□ 1.18
TSPAN4-206ENST00000397408 ARHGAP44Q17R89 818 aa22.43■■□□□ 1.18
TSPAN4-206ENST00000397408 GOLGA7BQ2TAP0 167 aa22.43■■□□□ 1.18
TSPAN4-206ENST00000397408 PARM1Q6UWI2 310 aa22.43■■□□□ 1.18
TSPAN4-206ENST00000397408 MTSS1LQ765P7 747 aa22.43■■□□□ 1.18
TSPAN4-206ENST00000397408 NUP93Q8N1F7 819 aa22.43■■□□□ 1.18
TSPAN4-206ENST00000397408 FGF14Q92915 247 aa22.43■■□□□ 1.18
TSPAN4-206ENST00000397408 TTLL2Q9BWV7 592 aa22.43■■□□□ 1.18
TSPAN4-206ENST00000397408 AJAP1Q9UKB5 411 aaPredicted RBP22.43■■□□□ 1.18
TSPAN4-206ENST00000397408 OBSL1O75147 1896 aa22.43■■□□□ 1.18
TSPAN4-206ENST00000397408 DCXO43602 365 aa22.42■■□□□ 1.18
TSPAN4-206ENST00000397408 FAM78AQ5JUQ0 283 aa22.42■■□□□ 1.18
TSPAN4-206ENST00000397408 APTXQ7Z2E3 356 aaKnown RBP22.42■■□□□ 1.18
TSPAN4-206ENST00000397408 LUZP1Q86V48 1076 aa22.42■■□□□ 1.18
TSPAN4-206ENST00000397408 ZSCAN18Q8TBC5 510 aaPredicted RBP22.42■■□□□ 1.18
TSPAN4-206ENST00000397408 MRPS31Q92665 395 aaKnown RBP22.42■■□□□ 1.18
TSPAN4-206ENST00000397408 NXPE3Q969Y0 559 aa22.42■■□□□ 1.18
TSPAN4-206ENST00000397408 ASB16Q96NS5 453 aa22.42■■□□□ 1.18
TSPAN4-206ENST00000397408 DUSP16Q9BY84 665 aa22.42■■□□□ 1.18
TSPAN4-206ENST00000397408 GPR88Q9GZN0 384 aa22.42■■□□□ 1.18
TSPAN4-206ENST00000397408 DNAJC12Q9UKB3 198 aa22.42■■□□□ 1.18
TSPAN4-206ENST00000397408 TSPAN16Q9UKR8 245 aa22.42■■□□□ 1.18
TSPAN4-206ENST00000397408 KIAA1257Q9ULG3 409 aa22.42■■□□□ 1.18
TSPAN4-206ENST00000397408 SORCS3Q9UPU3 1222 aa22.42■■□□□ 1.18
TSPAN4-206ENST00000397408 CNTN6Q9UQ52 1028 aa22.42■■□□□ 1.18
TSPAN4-206ENST00000397408 PATJQ8NI35 1801 aa22.42■■□□□ 1.18
TSPAN4-206ENST00000397408 ZNF638Q14966 1978 aaKnown RBP22.42■■□□□ 1.18
TSPAN4-206ENST00000397408 O00370 1275 aa22.41■■□□□ 1.18
TSPAN4-206ENST00000397408 TNFRSF10BO14763 440 aa22.41■■□□□ 1.18
TSPAN4-206ENST00000397408 RTN3O95197 1032 aaPredicted RBP22.41■■□□□ 1.18
TSPAN4-206ENST00000397408 CAVIN2O95810 425 aa22.41■■□□□ 1.18
TSPAN4-206ENST00000397408 CALCAP01258 141 aa22.41■■□□□ 1.18
TSPAN4-206ENST00000397408 DPY19L2P1Q6NXN4 242 aa22.41■■□□□ 1.18
TSPAN4-206ENST00000397408 SCAMP5Q8TAC9 235 aa22.41■■□□□ 1.18
TSPAN4-206ENST00000397408 TFAP2BQ92481 460 aa22.41■■□□□ 1.18
TSPAN4-206ENST00000397408 KXD1Q9BQD3 176 aa22.41■■□□□ 1.18
TSPAN4-206ENST00000397408 TASP1Q9H6P5 420 aa22.41■■□□□ 1.18
TSPAN4-206ENST00000397408 DENND4CQ5VZ89 1909 aa22.41■■□□□ 1.18
TSPAN4-206ENST00000397408 LRRC10BA6NIK2 292 aa22.4■■□□□ 1.18
TSPAN4-206ENST00000397408 FCARP24071 287 aa22.4■■□□□ 1.18
TSPAN4-206ENST00000397408 BRD2P25440 801 aaKnown RBP22.4■■□□□ 1.18
TSPAN4-206ENST00000397408 YWHAQP27348 245 aa22.4■■□□□ 1.18
TSPAN4-206ENST00000397408 USP8P40818 1118 aa22.4■■□□□ 1.18
TSPAN4-206ENST00000397408 KLHDC7AQ5VTJ3 777 aa22.4■■□□□ 1.18
TSPAN4-206ENST00000397408 GPRIN1Q7Z2K8 1008 aa22.4■■□□□ 1.18
TSPAN4-206ENST00000397408 TTC30AQ86WT1 665 aa22.4■■□□□ 1.18
TSPAN4-206ENST00000397408 ANKRD52Q8NB46 1076 aa22.4■■□□□ 1.18
TSPAN4-206ENST00000397408 SHC3Q92529 594 aa22.4■■□□□ 1.18
TSPAN4-206ENST00000397408 SMARCD2Q92925 531 aa22.4■■□□□ 1.18
TSPAN4-206ENST00000397408 FBXO32Q969P5 355 aa22.4■■□□□ 1.18
TSPAN4-206ENST00000397408 SLITRK1Q96PX8 696 aa22.4■■□□□ 1.18
TSPAN4-206ENST00000397408 RPP25Q9BUL9 199 aaKnown RBP22.4■■□□□ 1.18
TSPAN4-206ENST00000397408 HESX1Q9UBX0 185 aa22.4■■□□□ 1.18
TSPAN4-206ENST00000397408 FHOD1Q9Y613 1164 aa22.4■■□□□ 1.18
TSPAN4-206ENST00000397408 HHLA1C9JL84 531 aa22.4■■□□□ 1.18
TSPAN4-206ENST00000397408 ALADP13716 330 aa22.4■■□□□ 1.18
TSPAN4-206ENST00000397408 KLK7P49862 253 aa22.4■■□□□ 1.18
TSPAN4-206ENST00000397408 BCAT1P54687 386 aa22.4■■□□□ 1.18
TSPAN4-206ENST00000397408 TAF10Q12962 218 aa22.4■■□□□ 1.18
TSPAN4-206ENST00000397408 TDGQ13569 410 aa22.4■■□□□ 1.18
TSPAN4-206ENST00000397408 RAPGEF1Q13905 1077 aa22.4■■□□□ 1.18
TSPAN4-206ENST00000397408 TXNDC8Q6A555 127 aa22.4■■□□□ 1.18
TSPAN4-206ENST00000397408 ZSWIM1Q9BR11 485 aa22.4■■□□□ 1.18
TSPAN4-206ENST00000397408 SMOC2Q9H3U7 446 aa22.4■■□□□ 1.18
TSPAN4-206ENST00000397408 TRPC7Q9HCX4 862 aa22.4■■□□□ 1.18
TSPAN4-206ENST00000397408 PNPLA8Q9NP80 782 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms