RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 MYLPFQ96A32 169 aa20.04■□□□□ 0.8
TSPAN4-204ENST00000397404 HES6Q96HZ4 224 aa20.04■□□□□ 0.8
TSPAN4-204ENST00000397404 ZBED2Q9BTP6 218 aa20.04■□□□□ 0.8
TSPAN4-204ENST00000397404 GPR62Q9BZJ7 368 aa20.04■□□□□ 0.8
TSPAN4-204ENST00000397404 LRRC4Q9HBW1 653 aa20.04■□□□□ 0.8
TSPAN4-204ENST00000397404 CNGB3Q9NQW8 809 aa20.04■□□□□ 0.8
TSPAN4-204ENST00000397404 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.04■□□□□ 0.8
TSPAN4-204ENST00000397404 CHST7Q9NS84 486 aa20.04■□□□□ 0.8
TSPAN4-204ENST00000397404 KRT82Q9NSB4 513 aa20.04■□□□□ 0.8
TSPAN4-204ENST00000397404 MRFAP1Q9Y605 127 aa20.04■□□□□ 0.8
TSPAN4-204ENST00000397404 E5RJQ4 531 aa20.03■□□□□ 0.8
TSPAN4-204ENST00000397404 TRIM66O15016 1216 aa20.03■□□□□ 0.8
TSPAN4-204ENST00000397404 TBC1D4O60343 1298 aa20.03■□□□□ 0.8
TSPAN4-204ENST00000397404 IGFBP6P24592 240 aaPredicted RBP20.03■□□□□ 0.8
TSPAN4-204ENST00000397404 TERF1P54274 439 aa20.03■□□□□ 0.8
TSPAN4-204ENST00000397404 AMPD2Q01433 879 aa20.03■□□□□ 0.8
TSPAN4-204ENST00000397404 CKAP4Q07065 602 aaKnown RBP20.03■□□□□ 0.8
TSPAN4-204ENST00000397404 KIAA0319Q5VV43 1072 aa20.03■□□□□ 0.8
TSPAN4-204ENST00000397404 PAQR9Q6ZVX9 377 aa20.03■□□□□ 0.8
TSPAN4-204ENST00000397404 SLC26A9Q7LBE3 791 aa20.03■□□□□ 0.8
TSPAN4-204ENST00000397404 CEP112Q8N8E3 955 aa20.03■□□□□ 0.8
TSPAN4-204ENST00000397404 COLGALT1Q8NBJ5 622 aa20.03■□□□□ 0.8
TSPAN4-204ENST00000397404 MNS1Q8NEH6 495 aa20.03■□□□□ 0.8
TSPAN4-204ENST00000397404 OR10T2Q8NGX3 314 aa20.03■□□□□ 0.8
TSPAN4-204ENST00000397404 SP7Q8TDD2 431 aaPredicted RBP20.03■□□□□ 0.8
TSPAN4-204ENST00000397404 ABHD8Q96I13 439 aa20.03■□□□□ 0.8
TSPAN4-204ENST00000397404 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.03■□□□□ 0.82e-12■□□□□ 9.2
TSPAN4-204ENST00000397404 HERC2P3Q9BVR0 1158 aa20.03■□□□□ 0.8
TSPAN4-204ENST00000397404 TLR10Q9BXR5 811 aa20.03■□□□□ 0.8
TSPAN4-204ENST00000397404 PCDHB5Q9Y5E4 795 aa20.03■□□□□ 0.8
TSPAN4-204ENST00000397404 ATMINO43313 823 aaPredicted RBP20.02■□□□□ 0.8
TSPAN4-204ENST00000397404 ATP2C2O75185 946 aa20.02■□□□□ 0.8
TSPAN4-204ENST00000397404 GPR17Q13304 367 aa20.02■□□□□ 0.8
TSPAN4-204ENST00000397404 RAB41Q5JT25 222 aa20.02■□□□□ 0.8
TSPAN4-204ENST00000397404 LRRC38Q5VT99 294 aa20.02■□□□□ 0.8
TSPAN4-204ENST00000397404 SLC8B1Q6J4K2 584 aa20.02■□□□□ 0.8
TSPAN4-204ENST00000397404 KIAA1841Q6NSI8 718 aa20.02■□□□□ 0.8
TSPAN4-204ENST00000397404 PIGZQ86VD9 579 aa20.02■□□□□ 0.8
TSPAN4-204ENST00000397404 DNAAF5Q86Y56 855 aa20.02■□□□□ 0.8
TSPAN4-204ENST00000397404 SIX6OS1Q8N1H7 587 aa20.02■□□□□ 0.8
TSPAN4-204ENST00000397404 IRGQQ8WZA9 623 aa20.02■□□□□ 0.8
TSPAN4-204ENST00000397404 CARD9Q9H257 536 aa20.02■□□□□ 0.8
TSPAN4-204ENST00000397404 COMMD8Q9NX08 183 aa20.02■□□□□ 0.8
TSPAN4-204ENST00000397404 MTRRQ9UBK8 725 aa20.02■□□□□ 0.8
TSPAN4-204ENST00000397404 PSTPIP1O43586 416 aa20.01■□□□□ 0.79
TSPAN4-204ENST00000397404 SPOPO43791 374 aa20.01■□□□□ 0.79
TSPAN4-204ENST00000397404 ATP1A1P05023 1023 aaKnown RBP20.01■□□□□ 0.79
TSPAN4-204ENST00000397404 ATP2A2P16615 1042 aaKnown RBP20.01■□□□□ 0.79
TSPAN4-204ENST00000397404 CTNNA2P26232 953 aa20.01■□□□□ 0.79
TSPAN4-204ENST00000397404 SSTR3P32745 418 aaPredicted RBP20.01■□□□□ 0.79
TSPAN4-204ENST00000397404 DSG1Q02413 1049 aa20.01■□□□□ 0.79
TSPAN4-204ENST00000397404 MESDQ14696 234 aa20.01■□□□□ 0.79
TSPAN4-204ENST00000397404 FAM102AQ5T9C2 384 aaPredicted RBP20.01■□□□□ 0.79
TSPAN4-204ENST00000397404 RASIP1Q5U651 963 aa20.01■□□□□ 0.79
TSPAN4-204ENST00000397404 OR6B2Q6IFH4 312 aa20.01■□□□□ 0.79
TSPAN4-204ENST00000397404 CEP57Q86XR8 500 aa20.01■□□□□ 0.79
TSPAN4-204ENST00000397404 HERC6Q8IVU3 1022 aa20.01■□□□□ 0.79
TSPAN4-204ENST00000397404 DPF3Q92784 378 aa20.01■□□□□ 0.79
TSPAN4-204ENST00000397404 NAP1L3Q99457 506 aaPredicted RBP20.01■□□□□ 0.79
TSPAN4-204ENST00000397404 RRN3Q9NYV6 651 aa20.01■□□□□ 0.79
TSPAN4-204ENST00000397404 LZTS1Q9Y250 596 aa20.01■□□□□ 0.79
TSPAN4-204ENST00000397404 MRPL42Q9Y6G3 142 aaKnown RBP20.01■□□□□ 0.79
TSPAN4-204ENST00000397404 F8W810 466 aa20■□□□□ 0.79
TSPAN4-204ENST00000397404 FANCGO15287 622 aa20■□□□□ 0.79
TSPAN4-204ENST00000397404 HCRTO43612 131 aa20■□□□□ 0.79
TSPAN4-204ENST00000397404 HSF2BPO75031 334 aa20■□□□□ 0.79
TSPAN4-204ENST00000397404 TPGS2Q68CL5 300 aa20■□□□□ 0.79
TSPAN4-204ENST00000397404 OLFML1Q6UWY5 402 aa20■□□□□ 0.79
TSPAN4-204ENST00000397404 BEND5Q7L4P6 421 aa20■□□□□ 0.79
TSPAN4-204ENST00000397404 C8orf48Q96LL4 319 aa20■□□□□ 0.79
TSPAN4-204ENST00000397404 MCEEQ96PE7 176 aa20■□□□□ 0.79
TSPAN4-204ENST00000397404 OSBPL9Q96SU4 736 aa20■□□□□ 0.79
TSPAN4-204ENST00000397404 EHD2Q9NZN4 543 aa20■□□□□ 0.79
TSPAN4-204ENST00000397404 DPYSL4O14531 572 aa19.99■□□□□ 0.79
TSPAN4-204ENST00000397404 ENC1O14682 589 aa19.99■□□□□ 0.79
TSPAN4-204ENST00000397404 FTCDO95954 541 aa19.99■□□□□ 0.79
TSPAN4-204ENST00000397404 CTNNA1P35221 906 aaKnown RBP19.99■□□□□ 0.79
TSPAN4-204ENST00000397404 PAFAH1B1P43034 410 aa19.99■□□□□ 0.79
TSPAN4-204ENST00000397404 GLUD2P49448 558 aa19.99■□□□□ 0.79
TSPAN4-204ENST00000397404 ZNF143P52747 638 aaPredicted RBP19.99■□□□□ 0.79
TSPAN4-204ENST00000397404 ITIH3Q06033 890 aa19.99■□□□□ 0.79
TSPAN4-204ENST00000397404 SLC39A12Q504Y0 691 aa19.99■□□□□ 0.79
TSPAN4-204ENST00000397404 CYP4A22Q5TCH4 519 aa19.99■□□□□ 0.79
TSPAN4-204ENST00000397404 POLNQ7Z5Q5 900 aa19.99■□□□□ 0.79
TSPAN4-204ENST00000397404 CNPY3Q9BT09 278 aa19.99■□□□□ 0.79
TSPAN4-204ENST00000397404 PCDHA3Q9Y5H8 950 aa19.99■□□□□ 0.79
TSPAN4-204ENST00000397404 PAPSS1O43252 624 aaPredicted RBP19.99■□□□□ 0.79
TSPAN4-204ENST00000397404 RNF8O76064 485 aa19.99■□□□□ 0.79
TSPAN4-204ENST00000397404 URODP06132 367 aa19.99■□□□□ 0.79
TSPAN4-204ENST00000397404 COMTP21964 271 aa19.99■□□□□ 0.79
TSPAN4-204ENST00000397404 PCK1P35558 622 aa19.99■□□□□ 0.79
TSPAN4-204ENST00000397404 MAP3K7CLP57077 242 aa19.99■□□□□ 0.79
TSPAN4-204ENST00000397404 MRPS5P82675 430 aaKnown RBP19.99■□□□□ 0.79
TSPAN4-204ENST00000397404 PSMD5Q16401 504 aa19.99■□□□□ 0.79
TSPAN4-204ENST00000397404 HADHQ16836 314 aaKnown RBP19.99■□□□□ 0.79
TSPAN4-204ENST00000397404 FAM183BPQ6ZVS7 135 aa19.99■□□□□ 0.79
TSPAN4-204ENST00000397404 RHOT1Q8IXI2 618 aa19.99■□□□□ 0.79
TSPAN4-204ENST00000397404 GOLGA1Q92805 767 aa19.99■□□□□ 0.79
TSPAN4-204ENST00000397404 CD101Q93033 1021 aa19.99■□□□□ 0.79
TSPAN4-204ENST00000397404 SAMD11Q96NU1 681 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms