RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 HAPLN1P10915 354 aaPredicted RBP10.16□□□□□ -0.78
NEDD9-203ENST00000397378 PLS3P13797 630 aa10.16□□□□□ -0.78
NEDD9-203ENST00000397378 HMGA1P17096 107 aaKnown RBP10.16□□□□□ -0.78
NEDD9-203ENST00000397378 TIE1P35590 1138 aa10.16□□□□□ -0.78
NEDD9-203ENST00000397378 TNFSF9P41273 254 aa10.16□□□□□ -0.78
NEDD9-203ENST00000397378 GUCY2FP51841 1108 aa10.16□□□□□ -0.78
NEDD9-203ENST00000397378 CDR1P51861 262 aa10.16□□□□□ -0.78
NEDD9-203ENST00000397378 CXADRP78310 365 aa10.16□□□□□ -0.78
NEDD9-203ENST00000397378 MRPS21P82921 87 aaKnown RBP10.16□□□□□ -0.78
NEDD9-203ENST00000397378 GUCY1B3Q02153 619 aa10.16□□□□□ -0.78
NEDD9-203ENST00000397378 GRIK2Q13002 908 aa10.16□□□□□ -0.78
NEDD9-203ENST00000397378 ENOX2Q16206 610 aaKnown RBP10.16□□□□□ -0.78
NEDD9-203ENST00000397378 C9orf57Q5W0N0 161 aa10.16□□□□□ -0.78
NEDD9-203ENST00000397378 MON1AQ86VX9 555 aa10.16□□□□□ -0.78
NEDD9-203ENST00000397378 CD302Q8IX05 232 aa10.16□□□□□ -0.78
NEDD9-203ENST00000397378 TRIML1Q8N9V2 468 aa10.16□□□□□ -0.78
NEDD9-203ENST00000397378 RHBDD1Q8TEB9 315 aa10.16□□□□□ -0.78
NEDD9-203ENST00000397378 GIPC2Q8TF65 315 aa10.16□□□□□ -0.78
NEDD9-203ENST00000397378 OSCP1Q8WVF1 389 aa10.16□□□□□ -0.78
NEDD9-203ENST00000397378 BAP1Q92560 729 aa10.16□□□□□ -0.78
NEDD9-203ENST00000397378 HSPA12BQ96MM6 686 aa10.16□□□□□ -0.78
NEDD9-203ENST00000397378 ANO9A1A5B4 782 aa10.15□□□□□ -0.78
NEDD9-203ENST00000397378 E9PAM4 449 aa10.15□□□□□ -0.78
NEDD9-203ENST00000397378 H0YCG3 227 aa10.15□□□□□ -0.78
NEDD9-203ENST00000397378 PIRO00625 290 aa10.15□□□□□ -0.78
NEDD9-203ENST00000397378 OGTO15294 1046 aa10.15□□□□□ -0.78
NEDD9-203ENST00000397378 CSH1P0DML2 217 aa10.15□□□□□ -0.78
NEDD9-203ENST00000397378 CSH2P0DML3 217 aa10.15□□□□□ -0.78
NEDD9-203ENST00000397378 GNSP15586 552 aa10.15□□□□□ -0.78
NEDD9-203ENST00000397378 MATR3P43243 847 aaKnown RBP eCLIP10.15□□□□□ -0.78
NEDD9-203ENST00000397378 EOGTQ5NDL2 527 aa10.15□□□□□ -0.78
NEDD9-203ENST00000397378 KRT79Q5XKE5 535 aa10.15□□□□□ -0.78
NEDD9-203ENST00000397378 TXNDC8Q6A555 127 aa10.15□□□□□ -0.78
NEDD9-203ENST00000397378 KCNK18Q7Z418 384 aa10.15□□□□□ -0.78
NEDD9-203ENST00000397378 LRRTM3Q86VH5 581 aa10.15□□□□□ -0.78
NEDD9-203ENST00000397378 FMNL3Q8IVF7 1028 aa10.15□□□□□ -0.78
NEDD9-203ENST00000397378 SLC41A1Q8IVJ1 513 aa10.15□□□□□ -0.78
NEDD9-203ENST00000397378 KCTD17Q8N5Z5 321 aa10.15□□□□□ -0.78
NEDD9-203ENST00000397378 MRPS31Q92665 395 aaKnown RBP10.15□□□□□ -0.78
NEDD9-203ENST00000397378 CDC6Q99741 560 aa10.15□□□□□ -0.78
NEDD9-203ENST00000397378 PI4K2AQ9BTU6 479 aa10.15□□□□□ -0.78
NEDD9-203ENST00000397378 CCSER1Q9C0I3 900 aa10.15□□□□□ -0.78
NEDD9-203ENST00000397378 FAM124BQ9H5Z6 455 aaPredicted RBP10.15□□□□□ -0.78
NEDD9-203ENST00000397378 RPF1Q9H9Y2 349 aaKnown RBP10.15□□□□□ -0.78
NEDD9-203ENST00000397378 ZDHHC4Q9NPG8 344 aa10.15□□□□□ -0.78
NEDD9-203ENST00000397378 KCND2Q9NZV8 630 aa10.15□□□□□ -0.78
NEDD9-203ENST00000397378 SUSD2Q9UGT4 822 aa10.15□□□□□ -0.78
NEDD9-203ENST00000397378 PIEZO2Q9H5I5 2752 aa10.15□□□□□ -0.78
NEDD9-203ENST00000397378 ATMQ13315 3056 aa10.15□□□□□ -0.79
NEDD9-203ENST00000397378 PP2D1A8MPX8 630 aa10.14□□□□□ -0.79
NEDD9-203ENST00000397378 LAD1O00515 517 aa10.14□□□□□ -0.79
NEDD9-203ENST00000397378 EIF5BO60841 1220 aaKnown RBP10.14□□□□□ -0.79
NEDD9-203ENST00000397378 DKK1O94907 266 aa10.14□□□□□ -0.79
NEDD9-203ENST00000397378 PIGRP01833 764 aa10.14□□□□□ -0.79
NEDD9-203ENST00000397378 SCP2P22307 547 aa10.14□□□□□ -0.79
NEDD9-203ENST00000397378 CDC25AP30304 524 aa10.14□□□□□ -0.79
NEDD9-203ENST00000397378 OPRD1P41143 372 aa10.14□□□□□ -0.79
NEDD9-203ENST00000397378 PRPHP41219 470 aa10.14□□□□□ -0.79
NEDD9-203ENST00000397378 CSRP3P50461 194 aa10.14□□□□□ -0.79
NEDD9-203ENST00000397378 NCKAP1LP55160 1127 aa10.14□□□□□ -0.79
NEDD9-203ENST00000397378 FAM160A1Q05DH4 1040 aa10.14□□□□□ -0.79
NEDD9-203ENST00000397378 ST3GAL1Q11201 340 aa10.14□□□□□ -0.79
NEDD9-203ENST00000397378 USP4Q13107 963 aa10.14□□□□□ -0.79
NEDD9-203ENST00000397378 EML3Q32P44 896 aa10.14□□□□□ -0.79
NEDD9-203ENST00000397378 PREPLQ4J6C6 727 aaPredicted RBP10.14□□□□□ -0.79
NEDD9-203ENST00000397378 HYIQ5T013 277 aa10.14□□□□□ -0.79
NEDD9-203ENST00000397378 JADE1Q6IE81 842 aa10.14□□□□□ -0.79
NEDD9-203ENST00000397378 METTL23Q86XA0 190 aa10.14□□□□□ -0.79
NEDD9-203ENST00000397378 EFCAB13Q8IY85 973 aa10.14□□□□□ -0.79
NEDD9-203ENST00000397378 THEM5Q8N1Q8 247 aa10.14□□□□□ -0.79
NEDD9-203ENST00000397378 SYT2Q8N9I0 419 aaPredicted RBP10.14□□□□□ -0.79
NEDD9-203ENST00000397378 IL17RCQ8NAC3 791 aa10.14□□□□□ -0.79
NEDD9-203ENST00000397378 FBXO18Q8NFZ0 1043 aa10.14□□□□□ -0.79
NEDD9-203ENST00000397378 BICD1Q96G01 975 aa10.14□□□□□ -0.79
NEDD9-203ENST00000397378 C8orf76Q96K31 380 aa10.14□□□□□ -0.79
NEDD9-203ENST00000397378 MMTAG2Q9BU76 263 aaKnown RBP10.14□□□□□ -0.79
NEDD9-203ENST00000397378 ZDHHC5Q9C0B5 715 aa10.14□□□□□ -0.79
NEDD9-203ENST00000397378 SEMA4CQ9C0C4 833 aa10.14□□□□□ -0.79
NEDD9-203ENST00000397378 TMEM206Q9H813 350 aa10.14□□□□□ -0.79
NEDD9-203ENST00000397378 IL21RQ9HBE5 538 aa10.14□□□□□ -0.79
NEDD9-203ENST00000397378 TM7SF3Q9NS93 570 aa10.14□□□□□ -0.79
NEDD9-203ENST00000397378 ABI2Q9NYB9 513 aaPredicted RBP10.14□□□□□ -0.79
NEDD9-203ENST00000397378 LARSQ9P2J5 1176 aaKnown RBP10.14□□□□□ -0.79
NEDD9-203ENST00000397378 UXTQ9UBK9 157 aaPredicted RBP10.14□□□□□ -0.79
NEDD9-203ENST00000397378 NOL7Q9UMY1 257 aaKnown RBP10.14□□□□□ -0.79
NEDD9-203ENST00000397378 DERAQ9Y315 318 aa10.14□□□□□ -0.79
NEDD9-203ENST00000397378 AK5Q9Y6K8 562 aa10.14□□□□□ -0.79
NEDD9-203ENST00000397378 COL6A6A6NMZ7 2263 aa10.14□□□□□ -0.79
NEDD9-203ENST00000397378 PTPRQQ9UMZ3 2332 aa10.13□□□□□ -0.79
NEDD9-203ENST00000397378 A0A0B4J269 797 aa10.13□□□□□ -0.79
NEDD9-203ENST00000397378 CYB561D2O14569 222 aa10.13□□□□□ -0.79
NEDD9-203ENST00000397378 FLRT2O43155 660 aa10.13□□□□□ -0.79
NEDD9-203ENST00000397378 TADA3O75528 432 aa10.13□□□□□ -0.79
NEDD9-203ENST00000397378 NFATC1O95644 943 aa10.13□□□□□ -0.79
NEDD9-203ENST00000397378 TCF3P15923 654 aa10.13□□□□□ -0.79
NEDD9-203ENST00000397378 IL12RB1P42701 662 aa10.13□□□□□ -0.79
NEDD9-203ENST00000397378 TAF6P49848 677 aa10.13□□□□□ -0.79
NEDD9-203ENST00000397378 LIG4P49917 911 aa10.13□□□□□ -0.79
NEDD9-203ENST00000397378 RAD51AP2Q09MP3 1159 aa10.13□□□□□ -0.79
NEDD9-203ENST00000397378 LY6DQ14210 128 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms