RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 PPARGC1AQ9UBK2 798 aaKnown RBP9.59□□□□□ -0.87
CAPN3-206ENST00000397163 hCG_1818297A0A087WSY0 165 aa9.58□□□□□ -0.88
CAPN3-206ENST00000397163 IQANK1A0A1B0GTG1 560 aa9.58□□□□□ -0.88
CAPN3-206ENST00000397163 DLDP09622 509 aaKnown RBP9.58□□□□□ -0.88
CAPN3-206ENST00000397163 C1QBPQ07021 282 aaKnown RBP9.58□□□□□ -0.88
CAPN3-206ENST00000397163 PTK7Q13308 1070 aa9.58□□□□□ -0.88
CAPN3-206ENST00000397163 LSAMPQ13449 338 aa9.58□□□□□ -0.88
CAPN3-206ENST00000397163 MTMR1Q13613 665 aa9.58□□□□□ -0.88
CAPN3-206ENST00000397163 TKFCQ3LXA3 575 aa9.58□□□□□ -0.88
CAPN3-206ENST00000397163 TFDP3Q5H9I0 405 aa9.58□□□□□ -0.88
CAPN3-206ENST00000397163 PDIK1LQ8N165 341 aa9.58□□□□□ -0.88
CAPN3-206ENST00000397163 DCAKDQ8WVC6 231 aa9.58□□□□□ -0.88
CAPN3-206ENST00000397163 RSAD2Q8WXG1 361 aa9.58□□□□□ -0.88
CAPN3-206ENST00000397163 BSNDQ8WZ55 320 aa9.58□□□□□ -0.88
CAPN3-206ENST00000397163 CPT1BQ92523 772 aa9.58□□□□□ -0.88
CAPN3-206ENST00000397163 NKD2Q969F2 451 aaPredicted RBP9.58□□□□□ -0.88
CAPN3-206ENST00000397163 CENPKQ9BS16 269 aa9.58□□□□□ -0.88
CAPN3-206ENST00000397163 FETUBQ9UGM5 382 aa9.58□□□□□ -0.88
CAPN3-206ENST00000397163 LYPLA2O95372 231 aa9.58□□□□□ -0.88
CAPN3-206ENST00000397163 TGDSO95455 350 aa9.58□□□□□ -0.88
CAPN3-206ENST00000397163 INHBAP08476 426 aa9.58□□□□□ -0.88
CAPN3-206ENST00000397163 ITGA2BP08514 1039 aa9.58□□□□□ -0.88
CAPN3-206ENST00000397163 PSMC5P62195 406 aa9.58□□□□□ -0.88
CAPN3-206ENST00000397163 CUL2Q13617 745 aa9.58□□□□□ -0.88
CAPN3-206ENST00000397163 PRKD1Q15139 912 aaPredicted RBP9.58□□□□□ -0.88
CAPN3-206ENST00000397163 DNAJC24Q6P3W2 148 aa9.58□□□□□ -0.88
CAPN3-206ENST00000397163 ANKRD23Q86SG2 305 aa9.58□□□□□ -0.88
CAPN3-206ENST00000397163 C4orf19Q8IY42 314 aa9.58□□□□□ -0.88
CAPN3-206ENST00000397163 SMC1BQ8NDV3 1235 aa9.58□□□□□ -0.88
CAPN3-206ENST00000397163 MZB1Q8WU39 189 aa9.58□□□□□ -0.88
CAPN3-206ENST00000397163 CLMNQ96JQ2 1002 aa9.58□□□□□ -0.88
CAPN3-206ENST00000397163 FAM192AQ9GZU8 254 aa9.58□□□□□ -0.88
CAPN3-206ENST00000397163 EBF3Q9H4W6 596 aa9.58□□□□□ -0.88
CAPN3-206ENST00000397163 ARHGEF38Q9NXL2 777 aa9.58□□□□□ -0.88
CAPN3-206ENST00000397163 COL20A1Q9P218 1284 aa9.58□□□□□ -0.88
CAPN3-206ENST00000397163 CCPG1Q9ULG6 757 aa9.58□□□□□ -0.88
CAPN3-206ENST00000397163 ZNF711Q9Y462 761 aa9.58□□□□□ -0.88
CAPN3-206ENST00000397163 SNCAIPQ9Y6H5 919 aa9.58□□□□□ -0.88
CAPN3-206ENST00000397163 ADAMTSL1Q8N6G6 1762 aa9.58□□□□□ -0.88
CAPN3-206ENST00000397163 EIF4BP23588 611 aaKnown RBP9.58□□□□□ -0.88
CAPN3-206ENST00000397163 GDF10P55107 478 aa9.58□□□□□ -0.88
CAPN3-206ENST00000397163 OTUD4Q01804 1114 aaKnown RBP9.58□□□□□ -0.88
CAPN3-206ENST00000397163 KDSRQ06136 332 aa9.58□□□□□ -0.88
CAPN3-206ENST00000397163 GSTA3Q16772 222 aa9.58□□□□□ -0.88
CAPN3-206ENST00000397163 CEP70Q8NHQ1 597 aa9.58□□□□□ -0.88
CAPN3-206ENST00000397163 SHKBP1Q8TBC3 707 aa9.58□□□□□ -0.88
CAPN3-206ENST00000397163 ACTL9Q8TC94 416 aa9.58□□□□□ -0.88
CAPN3-206ENST00000397163 NAT14Q8WUY8 206 aa9.58□□□□□ -0.88
CAPN3-206ENST00000397163 APOPT1Q96IL0 206 aa9.58□□□□□ -0.88
CAPN3-206ENST00000397163 DHRS4Q9BTZ2 278 aa9.58□□□□□ -0.88
CAPN3-206ENST00000397163 THTPAQ9BU02 230 aa9.58□□□□□ -0.88
CAPN3-206ENST00000397163 ASCC2Q9H1I8 757 aaPredicted RBP9.58□□□□□ -0.88
CAPN3-206ENST00000397163 NDE1Q9NXR1 346 aa9.58□□□□□ -0.88
CAPN3-206ENST00000397163 TMCO1Q9UM00 188 aa9.58□□□□□ -0.88
CAPN3-206ENST00000397163 TMX2Q9Y320 296 aa9.58□□□□□ -0.88
CAPN3-206ENST00000397163 FARP1Q9Y4F1 1045 aaPredicted RBP9.58□□□□□ -0.88
CAPN3-206ENST00000397163 ZNF536O15090 1300 aa9.57□□□□□ -0.88
CAPN3-206ENST00000397163 NFASCO94856 1347 aa9.57□□□□□ -0.88
CAPN3-206ENST00000397163 TMEM191CA6NGB0 347 aa9.57□□□□□ -0.88
CAPN3-206ENST00000397163 BOLA2-SMG1P6H3BVE0 249 aa9.57□□□□□ -0.88
CAPN3-206ENST00000397163 I3L4J1 428 aa9.57□□□□□ -0.88
CAPN3-206ENST00000397163 TXNDC9O14530 226 aa9.57□□□□□ -0.88
CAPN3-206ENST00000397163 TMEM191BP0C7N4 346 aa9.57□□□□□ -0.88
CAPN3-206ENST00000397163 MYCLP12524 364 aaPredicted RBP9.57□□□□□ -0.88
CAPN3-206ENST00000397163 ANPEPP15144 967 aa9.57□□□□□ -0.88
CAPN3-206ENST00000397163 VAV1P15498 845 aa9.57□□□□□ -0.88
CAPN3-206ENST00000397163 ACO1P21399 889 aaKnown RBP9.57□□□□□ -0.88
CAPN3-206ENST00000397163 BASP1P80723 227 aaKnown RBP9.57□□□□□ -0.88
CAPN3-206ENST00000397163 DSG1Q02413 1049 aa9.57□□□□□ -0.88
CAPN3-206ENST00000397163 FAAP100Q0VG06 881 aa9.57□□□□□ -0.88
CAPN3-206ENST00000397163 TDRD10Q5VZ19 366 aaKnown RBP9.57□□□□□ -0.88
CAPN3-206ENST00000397163 CIAPIN1Q6FI81 312 aa9.57□□□□□ -0.88
CAPN3-206ENST00000397163 CHSY1Q86X52 802 aa9.57□□□□□ -0.88
CAPN3-206ENST00000397163 TMPRSS6Q8IU80 811 aa9.57□□□□□ -0.88
CAPN3-206ENST00000397163 SCUBE1Q8IWY4 988 aa9.57□□□□□ -0.88
CAPN3-206ENST00000397163 NLGN1Q8N2Q7 840 aa9.57□□□□□ -0.88
CAPN3-206ENST00000397163 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.57□□□□□ -0.88
CAPN3-206ENST00000397163 FBXO27Q8NI29 283 aa9.57□□□□□ -0.88
CAPN3-206ENST00000397163 MIPOL1Q8TD10 442 aa9.57□□□□□ -0.88
CAPN3-206ENST00000397163 LENG1Q96BZ8 264 aaPredicted RBP9.57□□□□□ -0.88
CAPN3-206ENST00000397163 SERAC1Q96JX3 654 aa9.57□□□□□ -0.88
CAPN3-206ENST00000397163 CEP170P1Q96L14 293 aa9.57□□□□□ -0.88
CAPN3-206ENST00000397163 NR1H4Q96RI1 486 aaPredicted RBP9.57□□□□□ -0.88
CAPN3-206ENST00000397163 SLC4A7Q9Y6M7 1214 aa9.57□□□□□ -0.88
CAPN3-206ENST00000397163 A0A0J9YVX5 310 aa9.57□□□□□ -0.88
CAPN3-206ENST00000397163 TCRBV7S3A2A0A539 114 aa9.57□□□□□ -0.88
CAPN3-206ENST00000397163 SPECC1L-ADORA2AF8WAN1 911 aa9.57□□□□□ -0.88
CAPN3-206ENST00000397163 NFIBO00712 420 aa9.57□□□□□ -0.88
CAPN3-206ENST00000397163 ASLP04424 464 aa9.57□□□□□ -0.88
CAPN3-206ENST00000397163 HARSP12081 509 aaKnown RBP9.57□□□□□ -0.88
CAPN3-206ENST00000397163 EIF2AK2P19525 551 aaKnown RBP9.57□□□□□ -0.88
CAPN3-206ENST00000397163 CDKN2BP42772 138 aa9.57□□□□□ -0.88
CAPN3-206ENST00000397163 ACOT2P49753 483 aa9.57□□□□□ -0.88
CAPN3-206ENST00000397163 LIG4P49917 911 aa9.57□□□□□ -0.88
CAPN3-206ENST00000397163 CDK7P50613 346 aa9.57□□□□□ -0.88
CAPN3-206ENST00000397163 RAP1GDS1P52306 607 aa9.57□□□□□ -0.88
CAPN3-206ENST00000397163 MCCD1P59942 119 aaPredicted RBP9.57□□□□□ -0.88
CAPN3-206ENST00000397163 YWHAGP61981 247 aaKnown RBP eCLIP9.57□□□□□ -0.88
CAPN3-206ENST00000397163 AP2B1P63010 937 aa9.57□□□□□ -0.88
CAPN3-206ENST00000397163 CBX3Q13185 183 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms