RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 IL18RAPO95256 599 aa16.05■□□□□ 0.16
SEC13-206ENST00000397102 CYP17A1P05093 508 aa16.05■□□□□ 0.16
SEC13-206ENST00000397102 CFIP05156 583 aa16.05■□□□□ 0.16
SEC13-206ENST00000397102 CHRM1P11229 460 aaPredicted RBP16.05■□□□□ 0.16
SEC13-206ENST00000397102 EIF2DP41214 584 aaKnown RBP16.05■□□□□ 0.16
SEC13-206ENST00000397102 HNRNPDQ14103 355 aaKnown RBP16.05■□□□□ 0.16
SEC13-206ENST00000397102 DUOXA1Q1HG43 343 aa16.05■□□□□ 0.16
SEC13-206ENST00000397102 ZNF423Q2M1K9 1284 aa16.05■□□□□ 0.16
SEC13-206ENST00000397102 EOGTQ5NDL2 527 aa16.05■□□□□ 0.16
SEC13-206ENST00000397102 CRELD2Q6UXH1 353 aaPredicted RBP16.05■□□□□ 0.16
SEC13-206ENST00000397102 SPATA2LQ8IUW3 424 aaPredicted RBP16.05■□□□□ 0.16
SEC13-206ENST00000397102 CHCHD4Q8N4Q1 142 aa16.05■□□□□ 0.16
SEC13-206ENST00000397102 CEP76Q8TAP6 659 aa16.05■□□□□ 0.16
SEC13-206ENST00000397102 PNKPQ96T60 521 aa16.05■□□□□ 0.16
SEC13-206ENST00000397102 SLC6A14Q9UN76 642 aa16.05■□□□□ 0.16
SEC13-206ENST00000397102 OPHN1O60890 802 aa16.04■□□□□ 0.16
SEC13-206ENST00000397102 APODP05090 189 aa16.04■□□□□ 0.16
SEC13-206ENST00000397102 ITPKAP23677 461 aa16.04■□□□□ 0.16
SEC13-206ENST00000397102 POLR2BP30876 1174 aaKnown RBP16.04■□□□□ 0.16
SEC13-206ENST00000397102 TIE1P35590 1138 aa16.04■□□□□ 0.16
SEC13-206ENST00000397102 MAGEA11P43364 429 aa16.04■□□□□ 0.16
SEC13-206ENST00000397102 ZXDBP98169 803 aa16.04■□□□□ 0.16
SEC13-206ENST00000397102 GFPT1Q06210 699 aaPredicted RBP16.04■□□□□ 0.16
SEC13-206ENST00000397102 RILPL1Q5EBL4 403 aa16.04■□□□□ 0.16
SEC13-206ENST00000397102 RABEPKQ7Z6M1 372 aa16.04■□□□□ 0.16
SEC13-206ENST00000397102 RAB44Q7Z6P3 723 aaPredicted RBP16.04■□□□□ 0.16
SEC13-206ENST00000397102 FILIP1Q7Z7B0 1213 aa16.04■□□□□ 0.16
SEC13-206ENST00000397102 SCN4BQ8IWT1 228 aa16.04■□□□□ 0.16
SEC13-206ENST00000397102 GTPBP2Q9BX10 602 aaKnown RBP16.04■□□□□ 0.16
SEC13-206ENST00000397102 ST6GALNAC4Q9H4F1 302 aa16.04■□□□□ 0.16
SEC13-206ENST00000397102 ZHX3Q9H4I2 956 aa16.04■□□□□ 0.16
SEC13-206ENST00000397102 AGAP1Q9UPQ3 857 aa16.04■□□□□ 0.16
SEC13-206ENST00000397102 GPSM3Q9Y4H4 160 aa16.04■□□□□ 0.16
SEC13-206ENST00000397102 DMXL2Q8TDJ6 3036 aa16.03■□□□□ 0.16
SEC13-206ENST00000397102 MYOFQ9NZM1 2061 aa16.03■□□□□ 0.16
SEC13-206ENST00000397102 A0A0A0MRY4 1105 aa16.03■□□□□ 0.16
SEC13-206ENST00000397102 AP5Z1O43299 807 aa16.03■□□□□ 0.16
SEC13-206ENST00000397102 TBCAO75347 108 aaKnown RBP16.03■□□□□ 0.16
SEC13-206ENST00000397102 KAT7O95251 611 aa16.03■□□□□ 0.16
SEC13-206ENST00000397102 ITGB3P05106 788 aa16.03■□□□□ 0.16
SEC13-206ENST00000397102 KRT18P05783 430 aaKnown RBP16.03■□□□□ 0.16
SEC13-206ENST00000397102 SERPINF2P08697 491 aa16.03■□□□□ 0.16
SEC13-206ENST00000397102 PCSK1P29120 753 aa16.03■□□□□ 0.16
SEC13-206ENST00000397102 KIR2DL1P43626 348 aaPredicted RBP16.03■□□□□ 0.16
SEC13-206ENST00000397102 LHX1P48742 406 aa16.03■□□□□ 0.16
SEC13-206ENST00000397102 FAM193AP78312 1265 aa16.03■□□□□ 0.16
SEC13-206ENST00000397102 DHX8Q14562 1220 aaKnown RBP16.03■□□□□ 0.16
SEC13-206ENST00000397102 DHCR24Q15392 516 aa16.03■□□□□ 0.16
SEC13-206ENST00000397102 CCDC142Q17RM4 750 aa16.03■□□□□ 0.16
SEC13-206ENST00000397102 ARL6IP4Q66PJ3 421 aaKnown RBP16.03■□□□□ 0.16
SEC13-206ENST00000397102 OSTM1Q86WC4 334 aa16.03■□□□□ 0.16
SEC13-206ENST00000397102 SFTPA1Q8IWL2 248 aa16.03■□□□□ 0.16
SEC13-206ENST00000397102 ADGRG2Q8IZP9 1017 aa16.03■□□□□ 0.16
SEC13-206ENST00000397102 LRRC52Q8N7C0 313 aa16.03■□□□□ 0.16
SEC13-206ENST00000397102 HMGB4Q8WW32 186 aa16.03■□□□□ 0.16
SEC13-206ENST00000397102 POMGNT1Q8WZA1 660 aa16.03■□□□□ 0.16
SEC13-206ENST00000397102 CALML4Q96GE6 196 aa16.03■□□□□ 0.16
SEC13-206ENST00000397102 SPATA17Q96L03 361 aa16.03■□□□□ 0.16
SEC13-206ENST00000397102 ZSCAN31Q96LW9 406 aaPredicted RBP16.03■□□□□ 0.16
SEC13-206ENST00000397102 CAPN10Q9HC96 672 aa16.03■□□□□ 0.16
SEC13-206ENST00000397102 FSCN3Q9NQT6 498 aa16.03■□□□□ 0.16
SEC13-206ENST00000397102 BLOC1S4Q9NUP1 217 aa16.03■□□□□ 0.16
SEC13-206ENST00000397102 GDAP2Q9NXN4 497 aa16.03■□□□□ 0.16
SEC13-206ENST00000397102 MYO18AQ92614 2054 aaKnown RBP16.03■□□□□ 0.16
SEC13-206ENST00000397102 DSPP15924 2871 aaKnown RBP16.02■□□□□ 0.16
SEC13-206ENST00000397102 TCRBV21S2A2A0A5A6 115 aa16.02■□□□□ 0.16
SEC13-206ENST00000397102 SLC9A3R1O14745 358 aaPredicted RBP16.02■□□□□ 0.16
SEC13-206ENST00000397102 GABRDO14764 452 aa16.02■□□□□ 0.16
SEC13-206ENST00000397102 ADAM23O75077 832 aa16.02■□□□□ 0.16
SEC13-206ENST00000397102 SLC6A11P48066 632 aa16.02■□□□□ 0.16
SEC13-206ENST00000397102 SLC7A9P82251 487 aa16.02■□□□□ 0.16
SEC13-206ENST00000397102 TFAMQ00059 246 aaKnown RBP16.02■□□□□ 0.16
SEC13-206ENST00000397102 MESP2Q0VG99 397 aa16.02■□□□□ 0.16
SEC13-206ENST00000397102 RESTQ13127 1097 aa16.02■□□□□ 0.16
SEC13-206ENST00000397102 POSTNQ15063 836 aa16.02■□□□□ 0.16
SEC13-206ENST00000397102 SOWAHCQ53LP3 525 aaPredicted RBP16.02■□□□□ 0.16
SEC13-206ENST00000397102 FAM171BQ6P995 826 aa16.02■□□□□ 0.16
SEC13-206ENST00000397102 C4orf50Q6ZRC1 276 aa16.02■□□□□ 0.16
SEC13-206ENST00000397102 ADGRF2Q8IZF7 708 aa16.02■□□□□ 0.16
SEC13-206ENST00000397102 PGBD3Q8N328 593 aa16.02■□□□□ 0.16
SEC13-206ENST00000397102 MINDY1Q8N5J2 469 aa16.02■□□□□ 0.16
SEC13-206ENST00000397102 TOP6BLQ8N6T0 577 aa16.02■□□□□ 0.16
SEC13-206ENST00000397102 C1orf127Q8N9H9 656 aa16.02■□□□□ 0.16
SEC13-206ENST00000397102 AK8Q96MA6 479 aa16.02■□□□□ 0.16
SEC13-206ENST00000397102 CEP295NLQ96MC4 621 aa16.02■□□□□ 0.16
SEC13-206ENST00000397102 TRPM5Q9NZQ8 1165 aa16.02■□□□□ 0.16
SEC13-206ENST00000397102 HCRTO43612 131 aa16.01■□□□□ 0.15
SEC13-206ENST00000397102 OLFM2O95897 454 aa16.01■□□□□ 0.15
SEC13-206ENST00000397102 CD59P13987 128 aa16.01■□□□□ 0.15
SEC13-206ENST00000397102 ADSSP30520 456 aa16.01■□□□□ 0.15
SEC13-206ENST00000397102 GRIA2P42262 883 aa16.01■□□□□ 0.15
SEC13-206ENST00000397102 TNFRSF4P43489 277 aa16.01■□□□□ 0.15
SEC13-206ENST00000397102 WNT7BP56706 349 aa16.01■□□□□ 0.15
SEC13-206ENST00000397102 RPL6Q02878 288 aaKnown RBP16.01■□□□□ 0.15
SEC13-206ENST00000397102 SCAPQ12770 1279 aa16.01■□□□□ 0.15
SEC13-206ENST00000397102 MCM6Q14566 821 aa16.01■□□□□ 0.15
SEC13-206ENST00000397102 EMC10Q5UCC4 262 aa16.01■□□□□ 0.15
SEC13-206ENST00000397102 VSTM1Q6UX27 236 aa16.01■□□□□ 0.15
SEC13-206ENST00000397102 SLC36A4Q6YBV0 504 aa16.01■□□□□ 0.15
SEC13-206ENST00000397102 DENND5BQ6ZUT9 1274 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms