RNA–Protein interactions for RNA: ENST00000396603.6

CLTA-203, Transcript of clathrin light chain A, humanhuman

TSL 1 (best) BASIC

Gene CLTA, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-203ENST00000396603 TRAPPC11Q7Z392 1133 aa17.4■□□□□ 0.38
CLTA-203ENST00000396603 CBWD2Q8IUF1 395 aa17.4■□□□□ 0.38
CLTA-203ENST00000396603 IQUBQ8NA54 791 aa17.4■□□□□ 0.38
CLTA-203ENST00000396603 SH3RF2Q8TEC5 729 aa17.4■□□□□ 0.38
CLTA-203ENST00000396603 CNTNAP3BQ96NU0 1288 aa17.4■□□□□ 0.38
CLTA-203ENST00000396603 SLC22A12Q96S37 553 aa17.4■□□□□ 0.38
CLTA-203ENST00000396603 PANK2Q9BZ23 570 aa17.4■□□□□ 0.38
CLTA-203ENST00000396603 CNTNAP3Q9BZ76 1288 aa17.4■□□□□ 0.38
CLTA-203ENST00000396603 FBRSL1Q9HCM7 1045 aaKnown RBP17.4■□□□□ 0.38
CLTA-203ENST00000396603 CRTAC1Q9NQ79 661 aa17.4■□□□□ 0.38
CLTA-203ENST00000396603 VPS45Q9NRW7 570 aa17.4■□□□□ 0.38
CLTA-203ENST00000396603 PTPRJQ12913 1337 aa17.4■□□□□ 0.38
CLTA-203ENST00000396603 SLC9A3R1O14745 358 aaPredicted RBP17.39■□□□□ 0.37
CLTA-203ENST00000396603 RHOBTB1O94844 696 aa17.39■□□□□ 0.37
CLTA-203ENST00000396603 LMO2P25791 158 aa17.39■□□□□ 0.37
CLTA-203ENST00000396603 ATICP31939 592 aa17.39■□□□□ 0.37
CLTA-203ENST00000396603 GRIK1P39086 918 aa17.39■□□□□ 0.37
CLTA-203ENST00000396603 EIF2DP41214 584 aaKnown RBP17.39■□□□□ 0.37
CLTA-203ENST00000396603 PSMD6Q15008 389 aa17.39■□□□□ 0.37
CLTA-203ENST00000396603 ELF2Q15723 593 aa17.39■□□□□ 0.37
CLTA-203ENST00000396603 FAM26FQ5R3K3 315 aa17.39■□□□□ 0.37
CLTA-203ENST00000396603 KBTBD6Q86V97 674 aa17.39■□□□□ 0.37
CLTA-203ENST00000396603 C12orf56Q8IXR9 622 aa17.39■□□□□ 0.37
CLTA-203ENST00000396603 PDILTQ8N807 584 aa17.39■□□□□ 0.37
CLTA-203ENST00000396603 ARL14EPQ8N8R7 260 aaPredicted RBP17.39■□□□□ 0.37
CLTA-203ENST00000396603 STKLD1Q8NE28 680 aa17.39■□□□□ 0.37
CLTA-203ENST00000396603 RPLP0P6Q8NHW5 317 aa17.39■□□□□ 0.37
CLTA-203ENST00000396603 NOC3LQ8WTT2 800 aaKnown RBP17.39■□□□□ 0.37
CLTA-203ENST00000396603 PCED1BQ96HM7 432 aa17.39■□□□□ 0.37
CLTA-203ENST00000396603 FNBP1Q96RU3 617 aa17.39■□□□□ 0.37
CLTA-203ENST00000396603 CYP2S1Q96SQ9 504 aa17.39■□□□□ 0.37
CLTA-203ENST00000396603 CGRRF1Q99675 332 aa17.39■□□□□ 0.37
CLTA-203ENST00000396603 C7orf25Q9BPX7 421 aa17.39■□□□□ 0.37
CLTA-203ENST00000396603 ELOVL4Q9GZR5 314 aa17.39■□□□□ 0.37
CLTA-203ENST00000396603 ARRDC1-AS1Q9H2J1 176 aa17.39■□□□□ 0.37
CLTA-203ENST00000396603 AGPAT3Q9NRZ7 376 aa17.39■□□□□ 0.37
CLTA-203ENST00000396603 WNT6Q9Y6F9 365 aa17.39■□□□□ 0.37
CLTA-203ENST00000396603 C2orf78A6NCI8 922 aa17.38■□□□□ 0.37
CLTA-203ENST00000396603 GDF9O60383 454 aa17.38■□□□□ 0.37
CLTA-203ENST00000396603 BDNFP23560 247 aa17.38■□□□□ 0.37
CLTA-203ENST00000396603 HOXD13P35453 343 aa17.38■□□□□ 0.37
CLTA-203ENST00000396603 EHHADHQ08426 723 aa17.38■□□□□ 0.37
CLTA-203ENST00000396603 DMC1Q14565 340 aa17.38■□□□□ 0.37
CLTA-203ENST00000396603 BMT2Q1RMZ1 405 aa17.38■□□□□ 0.37
CLTA-203ENST00000396603 PLK5Q496M5 336 aa17.38■□□□□ 0.37
CLTA-203ENST00000396603 HSF5Q4G112 596 aaPredicted RBP17.38■□□□□ 0.37
CLTA-203ENST00000396603 LMBRD2Q68DH5 695 aaPredicted RBP17.38■□□□□ 0.37
CLTA-203ENST00000396603 SCARA3Q6AZY7 606 aa17.38■□□□□ 0.37
CLTA-203ENST00000396603 HS2ST1Q7LGA3 356 aa17.38■□□□□ 0.37
CLTA-203ENST00000396603 DDX42Q86XP3 938 aaKnown RBP eCLIP17.38■□□□□ 0.37
CLTA-203ENST00000396603 XXYLT1Q8NBI6 393 aa17.38■□□□□ 0.37
CLTA-203ENST00000396603 OVCA2Q8WZ82 227 aa17.38■□□□□ 0.37
CLTA-203ENST00000396603 MMS19Q96T76 1030 aa17.38■□□□□ 0.37
CLTA-203ENST00000396603 DUSP9Q99956 384 aaKnown RBP17.38■□□□□ 0.37
CLTA-203ENST00000396603 SNX25Q9H3E2 840 aa17.38■□□□□ 0.37
CLTA-203ENST00000396603 VRTNQ9H8Y1 702 aa17.38■□□□□ 0.37
CLTA-203ENST00000396603 PCDHA7Q9UN72 937 aa17.38■□□□□ 0.37
CLTA-203ENST00000396603 GREB1Q4ZG55 1949 aa17.38■□□□□ 0.37
CLTA-203ENST00000396603 ZNF840PA6NDX5 716 aa17.37■□□□□ 0.37
CLTA-203ENST00000396603 TULP1O00294 542 aaPredicted RBP17.37■□□□□ 0.37
CLTA-203ENST00000396603 TM4SF5O14894 197 aa17.37■□□□□ 0.37
CLTA-203ENST00000396603 TGFB1I1O43294 461 aa17.37■□□□□ 0.37
CLTA-203ENST00000396603 HCRTO43612 131 aa17.37■□□□□ 0.37
CLTA-203ENST00000396603 ATP2C2O75185 946 aa17.37■□□□□ 0.37
CLTA-203ENST00000396603 TNNI1P19237 187 aa17.37■□□□□ 0.37
CLTA-203ENST00000396603 GNL1P36915 607 aaPredicted RBP17.37■□□□□ 0.37
CLTA-203ENST00000396603 MPLP40238 635 aa17.37■□□□□ 0.37
CLTA-203ENST00000396603 PXNP49023 591 aaPredicted RBP17.37■□□□□ 0.37
CLTA-203ENST00000396603 PSMC1P62191 440 aaKnown RBP17.37■□□□□ 0.37
CLTA-203ENST00000396603 TNNC1P63316 161 aa17.37■□□□□ 0.37
CLTA-203ENST00000396603 ASIC1P78348 528 aa17.37■□□□□ 0.37
CLTA-203ENST00000396603 CYP27A1Q02318 531 aa17.37■□□□□ 0.37
CLTA-203ENST00000396603 PSMD2Q13200 908 aa17.37■□□□□ 0.37
CLTA-203ENST00000396603 CCDC142Q17RM4 750 aa17.37■□□□□ 0.37
CLTA-203ENST00000396603 UNC13DQ70J99 1090 aa17.37■□□□□ 0.37
CLTA-203ENST00000396603 PDZD8Q8NEN9 1154 aa17.37■□□□□ 0.37
CLTA-203ENST00000396603 TMEM174Q8WUU8 243 aa17.37■□□□□ 0.37
CLTA-203ENST00000396603 EZH1Q92800 747 aaPredicted RBP17.37■□□□□ 0.37
CLTA-203ENST00000396603 SYAP1Q96A49 352 aaPredicted RBP17.37■□□□□ 0.37
CLTA-203ENST00000396603 IPO9Q96P70 1041 aaKnown RBP17.37■□□□□ 0.37
CLTA-203ENST00000396603 SLITRK1Q96PX8 696 aa17.37■□□□□ 0.37
CLTA-203ENST00000396603 DUSP15Q9H1R2 295 aaPredicted RBP17.37■□□□□ 0.37
CLTA-203ENST00000396603 LEFTY2O00292 366 aa17.36■□□□□ 0.37
CLTA-203ENST00000396603 OAS1P00973 400 aaKnown RBP17.36■□□□□ 0.37
CLTA-203ENST00000396603 AP3M2P53677 418 aa17.36■□□□□ 0.37
CLTA-203ENST00000396603 MRPS21P82921 87 aaKnown RBP17.36■□□□□ 0.37
CLTA-203ENST00000396603 CYP24A1Q07973 514 aa17.36■□□□□ 0.37
CLTA-203ENST00000396603 TDRD10Q5VZ19 366 aaKnown RBP17.36■□□□□ 0.37
CLTA-203ENST00000396603 RASSF3Q86WH2 238 aa17.36■□□□□ 0.37
CLTA-203ENST00000396603 GLIS3Q8NEA6 775 aa17.36■□□□□ 0.37
CLTA-203ENST00000396603 GOLGA5Q8TBA6 731 aa17.36■□□□□ 0.37
CLTA-203ENST00000396603 USP33Q8TEY7 942 aa17.36■□□□□ 0.37
CLTA-203ENST00000396603 OTUB2Q96DC9 234 aa17.36■□□□□ 0.37
CLTA-203ENST00000396603 FAM84AQ96KN4 292 aa17.36■□□□□ 0.37
CLTA-203ENST00000396603 HHIPQ96QV1 700 aa17.36■□□□□ 0.37
CLTA-203ENST00000396603 ZNF638Q14966 1978 aaKnown RBP17.36■□□□□ 0.37
CLTA-203ENST00000396603 PVALEFA0A1B0GWK0 134 aa17.35■□□□□ 0.37
CLTA-203ENST00000396603 GOLGA6L4A6NEF3 574 aa17.35■□□□□ 0.37
CLTA-203ENST00000396603 F8VP50 259 aa17.35■□□□□ 0.37
CLTA-203ENST00000396603 RTN3O95197 1032 aaPredicted RBP17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms