RNA–Protein interactions for RNA: ENST00000395793.7

CXCL12-204, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-204ENST00000395793 PTPN1P18031 435 aaKnown RBP19.23■□□□□ 0.67
CXCL12-204ENST00000395793 CMA1P23946 247 aa19.23■□□□□ 0.67
CXCL12-204ENST00000395793 RAP1GAPP47736 663 aa19.23■□□□□ 0.67
CXCL12-204ENST00000395793 NRLP54845 237 aa19.23■□□□□ 0.67
CXCL12-204ENST00000395793 CDH8P55286 799 aa19.23■□□□□ 0.67
CXCL12-204ENST00000395793 DLG4P78352 724 aa19.23■□□□□ 0.67
CXCL12-204ENST00000395793 CLDN10P78369 228 aa19.23■□□□□ 0.67
CXCL12-204ENST00000395793 TRPC3Q13507 836 aa19.23■□□□□ 0.67
CXCL12-204ENST00000395793 PPP2R5DQ14738 602 aa19.23■□□□□ 0.67
CXCL12-204ENST00000395793 HEATR6Q6AI08 1181 aaKnown RBP19.23■□□□□ 0.67
CXCL12-204ENST00000395793 DENND5BQ6ZUT9 1274 aa19.23■□□□□ 0.67
CXCL12-204ENST00000395793 TTC16Q8NEE8 873 aa19.23■□□□□ 0.67
CXCL12-204ENST00000395793 SH3RF2Q8TEC5 729 aa19.23■□□□□ 0.67
CXCL12-204ENST00000395793 EZH1Q92800 747 aaPredicted RBP19.23■□□□□ 0.67
CXCL12-204ENST00000395793 SPATA32Q96LK8 384 aa19.23■□□□□ 0.67
CXCL12-204ENST00000395793 B3GNT5Q9BYG0 378 aa19.23■□□□□ 0.67
CXCL12-204ENST00000395793 VRTNQ9H8Y1 702 aa19.23■□□□□ 0.67
CXCL12-204ENST00000395793 PARD6AQ9NPB6 346 aa19.23■□□□□ 0.67
CXCL12-204ENST00000395793 EGFP01133 1207 aa19.22■□□□□ 0.67
CXCL12-204ENST00000395793 FAM163BP0C2L3 166 aa19.22■□□□□ 0.67
CXCL12-204ENST00000395793 ATICP31939 592 aa19.22■□□□□ 0.67
CXCL12-204ENST00000395793 GJA4P35212 333 aa19.22■□□□□ 0.67
CXCL12-204ENST00000395793 BIRC3Q13489 604 aa19.22■□□□□ 0.67
CXCL12-204ENST00000395793 PDGFRLQ15198 375 aa19.22■□□□□ 0.67
CXCL12-204ENST00000395793 EML3Q32P44 896 aa19.22■□□□□ 0.67
CXCL12-204ENST00000395793 CC2D1AQ6P1N0 951 aaPredicted RBP19.22■□□□□ 0.67
CXCL12-204ENST00000395793 SLC9A9Q8IVB4 645 aa19.22■□□□□ 0.67
CXCL12-204ENST00000395793 SYNPOQ8N3V7 929 aa19.22■□□□□ 0.67
CXCL12-204ENST00000395793 B3GALNT2Q8NCR0 500 aa19.22■□□□□ 0.67
CXCL12-204ENST00000395793 GOLGA5Q8TBA6 731 aa19.22■□□□□ 0.67
CXCL12-204ENST00000395793 OSCP1Q8WVF1 389 aa19.22■□□□□ 0.67
CXCL12-204ENST00000395793 SYAP1Q96A49 352 aaPredicted RBP19.22■□□□□ 0.67
CXCL12-204ENST00000395793 C8orf48Q96LL4 319 aa19.22■□□□□ 0.67
CXCL12-204ENST00000395793 ECT2Q9H8V3 914 aa19.22■□□□□ 0.67
CXCL12-204ENST00000395793 POLR3BQ9NW08 1133 aaPredicted RBP19.22■□□□□ 0.67
CXCL12-204ENST00000395793 FAM237AA0A1B0GTK4 181 aa19.21■□□□□ 0.67
CXCL12-204ENST00000395793 A8MXQ7 604 aa19.21■□□□□ 0.67
CXCL12-204ENST00000395793 TRIM66O15016 1216 aa19.21■□□□□ 0.67
CXCL12-204ENST00000395793 PHACTR2O75167 634 aa19.21■□□□□ 0.67
CXCL12-204ENST00000395793 TCF3P15923 654 aa19.21■□□□□ 0.67
CXCL12-204ENST00000395793 HDCP19113 662 aa19.21■□□□□ 0.67
CXCL12-204ENST00000395793 ANXA13P27216 316 aa19.21■□□□□ 0.67
CXCL12-204ENST00000395793 NDUFA8P51970 172 aa19.21■□□□□ 0.67
CXCL12-204ENST00000395793 NOP14P78316 857 aaKnown RBP19.21■□□□□ 0.67
CXCL12-204ENST00000395793 PSMD2Q13200 908 aa19.21■□□□□ 0.67
CXCL12-204ENST00000395793 KCNB1Q14721 858 aa19.21■□□□□ 0.67
CXCL12-204ENST00000395793 ZNF699Q32M78 642 aa19.21■□□□□ 0.67
CXCL12-204ENST00000395793 C1orf220Q5T0J3 134 aa19.21■□□□□ 0.67
CXCL12-204ENST00000395793 SCARA5Q6ZMJ2 495 aa19.21■□□□□ 0.67
CXCL12-204ENST00000395793 FSIP1Q8NA03 581 aa19.21■□□□□ 0.67
CXCL12-204ENST00000395793 TMEM174Q8WUU8 243 aa19.21■□□□□ 0.67
CXCL12-204ENST00000395793 CEP295NLQ96MC4 621 aa19.21■□□□□ 0.67
CXCL12-204ENST00000395793 GOLPH3LQ9H4A5 285 aa19.21■□□□□ 0.67
CXCL12-204ENST00000395793 DUS2Q9NX74 493 aaKnown RBP19.21■□□□□ 0.67
CXCL12-204ENST00000395793 ARHGAP26Q9UNA1 814 aa19.21■□□□□ 0.67
CXCL12-204ENST00000395793 RALGAPA1Q6GYQ0 2036 aa19.2■□□□□ 0.66
CXCL12-204ENST00000395793 DNAH14Q0VDD8 3507 aa19.2■□□□□ 0.66
CXCL12-204ENST00000395793 SPAG17Q6Q759 2223 aa19.2■□□□□ 0.66
CXCL12-204ENST00000395793 ZNF840PA6NDX5 716 aa19.2■□□□□ 0.66
CXCL12-204ENST00000395793 PDXKO00764 312 aa19.2■□□□□ 0.66
CXCL12-204ENST00000395793 NR3C1P04150 777 aa19.2■□□□□ 0.66
CXCL12-204ENST00000395793 RPN1P04843 607 aaKnown RBP19.2■□□□□ 0.66
CXCL12-204ENST00000395793 GALK1P51570 392 aa19.2■□□□□ 0.66
CXCL12-204ENST00000395793 KRT85P78386 507 aa19.2■□□□□ 0.66
CXCL12-204ENST00000395793 NCOA4Q13772 614 aa19.2■□□□□ 0.66
CXCL12-204ENST00000395793 PRR23BQ6ZRT6 265 aa19.2■□□□□ 0.66
CXCL12-204ENST00000395793 PAQR9Q6ZVX9 377 aa19.2■□□□□ 0.66
CXCL12-204ENST00000395793 ERMP1Q7Z2K6 904 aa19.2■□□□□ 0.66
CXCL12-204ENST00000395793 LONP2Q86WA8 852 aa19.2■□□□□ 0.66
CXCL12-204ENST00000395793 CPA6Q8N4T0 437 aa19.2■□□□□ 0.66
CXCL12-204ENST00000395793 ELOVL4Q9GZR5 314 aa19.2■□□□□ 0.66
CXCL12-204ENST00000395793 RNF38Q9H0F5 515 aa19.2■□□□□ 0.66
CXCL12-204ENST00000395793 LINC00597Q9H2U6 94 aa19.2■□□□□ 0.66
CXCL12-204ENST00000395793 TRPM5Q9NZQ8 1165 aa19.2■□□□□ 0.66
CXCL12-204ENST00000395793 USP25Q9UHP3 1055 aa19.2■□□□□ 0.66
CXCL12-204ENST00000395793 MYH10P35580 1976 aa19.2■□□□□ 0.66
CXCL12-204ENST00000395793 MYOFQ9NZM1 2061 aa19.2■□□□□ 0.66
CXCL12-204ENST00000395793 RNF40O75150 1001 aa19.19■□□□□ 0.66
CXCL12-204ENST00000395793 OLFM2O95897 454 aa19.19■□□□□ 0.66
CXCL12-204ENST00000395793 SYKP43405 635 aa19.19■□□□□ 0.66
CXCL12-204ENST00000395793 IFNAR2P48551 515 aa19.19■□□□□ 0.66
CXCL12-204ENST00000395793 GRSF1Q12849 480 aaKnown RBP eCLIP19.19■□□□□ 0.66
CXCL12-204ENST00000395793 TAF10Q12962 218 aa19.19■□□□□ 0.66
CXCL12-204ENST00000395793 ZNF667Q5HYK9 610 aa19.19■□□□□ 0.66
CXCL12-204ENST00000395793 FAM35AQ86V20 835 aa19.19■□□□□ 0.66
CXCL12-204ENST00000395793 P2RY13Q9BPV8 354 aa19.19■□□□□ 0.66
CXCL12-204ENST00000395793 DLL3Q9NYJ7 618 aa19.19■□□□□ 0.66
CXCL12-204ENST00000395793 HMGXB4Q9UGU5 601 aa19.19■□□□□ 0.66
CXCL12-204ENST00000395793 LEFTY2O00292 366 aa19.18■□□□□ 0.66
CXCL12-204ENST00000395793 OAS1P00973 400 aaKnown RBP19.18■□□□□ 0.66
CXCL12-204ENST00000395793 HOXA6P31267 233 aa19.18■□□□□ 0.66
CXCL12-204ENST00000395793 PXNP49023 591 aaPredicted RBP19.18■□□□□ 0.66
CXCL12-204ENST00000395793 AP3M2P53677 418 aa19.18■□□□□ 0.66
CXCL12-204ENST00000395793 DPYDQ12882 1025 aa19.18■□□□□ 0.66
CXCL12-204ENST00000395793 IFRD2Q12894 506 aaPredicted RBP19.18■□□□□ 0.66
CXCL12-204ENST00000395793 ORC1Q13415 861 aa19.18■□□□□ 0.66
CXCL12-204ENST00000395793 SIM2Q14190 667 aaPredicted RBP19.18■□□□□ 0.66
CXCL12-204ENST00000395793 RSPO4Q2I0M5 234 aaPredicted RBP19.18■□□□□ 0.66
CXCL12-204ENST00000395793 GAB4Q2WGN9 574 aa19.18■□□□□ 0.66
CXCL12-204ENST00000395793 ZACNQ401N2 412 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms