RNA–Protein interactions for RNA: ENST00000395736.7

TOM1-202, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-202ENST00000395736 MDH1BQ5I0G3 518 aa11.76□□□□□ -0.53
TOM1-202ENST00000395736 TRIM68Q6AZZ1 485 aa11.76□□□□□ -0.53
TOM1-202ENST00000395736 C4orf50Q6ZRC1 276 aa11.76□□□□□ -0.53
TOM1-202ENST00000395736 Q6ZS52 159 aa11.76□□□□□ -0.53
TOM1-202ENST00000395736 MON1AQ86VX9 555 aa11.76□□□□□ -0.53
TOM1-202ENST00000395736 SCN4BQ8IWT1 228 aa11.76□□□□□ -0.53
TOM1-202ENST00000395736 CELF5Q8N6W0 485 aaKnown RBP11.76□□□□□ -0.53
TOM1-202ENST00000395736 FSIP1Q8NA03 581 aa11.76□□□□□ -0.53
TOM1-202ENST00000395736 ZBTB44Q8NCP5 570 aa11.76□□□□□ -0.53
TOM1-202ENST00000395736 MYCBPAPQ8TBZ2 947 aa11.76□□□□□ -0.53
TOM1-202ENST00000395736 MSANTD3Q96H12 275 aa11.76□□□□□ -0.53
TOM1-202ENST00000395736 FAM83CQ9BQN1 747 aa11.76□□□□□ -0.53
TOM1-202ENST00000395736 SDCBP2Q9H190 292 aa11.76□□□□□ -0.53
TOM1-202ENST00000395736 VRTNQ9H8Y1 702 aa11.76□□□□□ -0.53
TOM1-202ENST00000395736 LMAN1LQ9HAT1 526 aa11.76□□□□□ -0.53
TOM1-202ENST00000395736 RBM12Q9NTZ6 932 aaKnown RBP11.76□□□□□ -0.53
TOM1-202ENST00000395736 R3HCC1Q9Y3T6 440 aaKnown RBP11.76□□□□□ -0.53
TOM1-202ENST00000395736 MYO16Q9Y6X6 1858 aa11.76□□□□□ -0.53
TOM1-202ENST00000395736 C2orf78A6NCI8 922 aa11.75□□□□□ -0.53
TOM1-202ENST00000395736 NCAM2O15394 837 aa11.75□□□□□ -0.53
TOM1-202ENST00000395736 PMLP29590 882 aa11.75□□□□□ -0.53
TOM1-202ENST00000395736 HOXC13P31276 330 aa11.75□□□□□ -0.53
TOM1-202ENST00000395736 GNL1P36915 607 aaPredicted RBP11.75□□□□□ -0.53
TOM1-202ENST00000395736 AVPR1AP37288 418 aa11.75□□□□□ -0.53
TOM1-202ENST00000395736 KPNA1P52294 538 aaPredicted RBP11.75□□□□□ -0.53
TOM1-202ENST00000395736 CDH8P55286 799 aa11.75□□□□□ -0.53
TOM1-202ENST00000395736 TNNC1P63316 161 aa11.75□□□□□ -0.53
TOM1-202ENST00000395736 CYP27A1Q02318 531 aa11.75□□□□□ -0.53
TOM1-202ENST00000395736 DMWDQ09019 674 aa11.75□□□□□ -0.53
TOM1-202ENST00000395736 USP4Q13107 963 aa11.75□□□□□ -0.53
TOM1-202ENST00000395736 CCINQ13939 588 aa11.75□□□□□ -0.53
TOM1-202ENST00000395736 ZNF268Q14587 947 aaPredicted RBP11.75□□□□□ -0.53
TOM1-202ENST00000395736 ZNF77Q15935 545 aa11.75□□□□□ -0.53
TOM1-202ENST00000395736 VSTM1Q6UX27 236 aa11.75□□□□□ -0.53
TOM1-202ENST00000395736 KRBA2Q6ZNG9 492 aa11.75□□□□□ -0.53
TOM1-202ENST00000395736 GPR161Q8N6U8 529 aaKnown RBP11.75□□□□□ -0.53
TOM1-202ENST00000395736 OR6B3Q8NGW1 331 aa11.75□□□□□ -0.53
TOM1-202ENST00000395736 MRPS31Q92665 395 aaKnown RBP11.75□□□□□ -0.53
TOM1-202ENST00000395736 SPATA17Q96L03 361 aa11.75□□□□□ -0.53
TOM1-202ENST00000395736 CYP2S1Q96SQ9 504 aa11.75□□□□□ -0.53
TOM1-202ENST00000395736 ZNF518BQ9C0D4 1074 aa11.75□□□□□ -0.53
TOM1-202ENST00000395736 SCAND2PQ9GZW5 306 aaPredicted RBP11.75□□□□□ -0.53
TOM1-202ENST00000395736 C8orf33Q9H7E9 229 aaPredicted RBP11.75□□□□□ -0.53
TOM1-202ENST00000395736 TDP1Q9NUW8 608 aa11.75□□□□□ -0.53
TOM1-202ENST00000395736 C2orf42Q9NWW7 574 aa11.75□□□□□ -0.53
TOM1-202ENST00000395736 GCNT4Q9P109 453 aa11.75□□□□□ -0.53
TOM1-202ENST00000395736 MAGEC2Q9UBF1 373 aaPredicted RBP11.75□□□□□ -0.53
TOM1-202ENST00000395736 UXTQ9UBK9 157 aaPredicted RBP11.75□□□□□ -0.53
TOM1-202ENST00000395736 NXF1Q9UBU9 619 aaKnown RBP11.75□□□□□ -0.53
TOM1-202ENST00000395736 ZMYM5Q9UJ78 669 aa11.75□□□□□ -0.53
TOM1-202ENST00000395736 ANGPTL2Q9UKU9 493 aa11.75□□□□□ -0.53
TOM1-202ENST00000395736 TRAF3IP3Q9Y228 551 aa11.75□□□□□ -0.53
TOM1-202ENST00000395736 SOBPA7XYQ1 873 aa11.74□□□□□ -0.53
TOM1-202ENST00000395736 F8VP50 259 aa11.74□□□□□ -0.53
TOM1-202ENST00000395736 CLDN5O00501 218 aa11.74□□□□□ -0.53
TOM1-202ENST00000395736 LILRB5O75023 590 aa11.74□□□□□ -0.53
TOM1-202ENST00000395736 FAM163BP0C2L3 166 aa11.74□□□□□ -0.53
TOM1-202ENST00000395736 ARSAP15289 507 aa11.74□□□□□ -0.53
TOM1-202ENST00000395736 PTPN1P18031 435 aaKnown RBP11.74□□□□□ -0.53
TOM1-202ENST00000395736 ATICP31939 592 aa11.74□□□□□ -0.53
TOM1-202ENST00000395736 ZXDBP98169 803 aa11.74□□□□□ -0.53
TOM1-202ENST00000395736 PLCB2Q00722 1185 aa11.74□□□□□ -0.53
TOM1-202ENST00000395736 SATB1Q01826 763 aa11.74□□□□□ -0.53
TOM1-202ENST00000395736 BIRC3Q13489 604 aa11.74□□□□□ -0.53
TOM1-202ENST00000395736 TRPC3Q13507 836 aa11.74□□□□□ -0.53
TOM1-202ENST00000395736 NCOA4Q13772 614 aa11.74□□□□□ -0.53
TOM1-202ENST00000395736 PON2Q15165 354 aa11.74□□□□□ -0.53
TOM1-202ENST00000395736 MAPRE1Q15691 268 aaKnown RBP11.74□□□□□ -0.53
TOM1-202ENST00000395736 ZNF699Q32M78 642 aa11.74□□□□□ -0.53
TOM1-202ENST00000395736 ZACNQ401N2 412 aa11.74□□□□□ -0.53
TOM1-202ENST00000395736 ZCWPW2Q504Y3 356 aa11.74□□□□□ -0.53
TOM1-202ENST00000395736 NAIF1Q69YI7 327 aaPredicted RBP11.74□□□□□ -0.53
TOM1-202ENST00000395736 SCARA5Q6ZMJ2 495 aa11.74□□□□□ -0.53
TOM1-202ENST00000395736 MAMSTRQ6ZN01 415 aa11.74□□□□□ -0.53
TOM1-202ENST00000395736 RALGPS2Q86X27 583 aaPredicted RBP11.74□□□□□ -0.53
TOM1-202ENST00000395736 B3GALNT2Q8NCR0 500 aa11.74□□□□□ -0.53
TOM1-202ENST00000395736 SYAP1Q96A49 352 aaPredicted RBP11.74□□□□□ -0.53
TOM1-202ENST00000395736 TTLL2Q9BWV7 592 aa11.74□□□□□ -0.53
TOM1-202ENST00000395736 B3GNT5Q9BYG0 378 aa11.74□□□□□ -0.53
TOM1-202ENST00000395736 SNX25Q9H3E2 840 aa11.74□□□□□ -0.53
TOM1-202ENST00000395736 EBF3Q9H4W6 596 aa11.74□□□□□ -0.53
TOM1-202ENST00000395736 KIF9Q9HAQ2 790 aa11.74□□□□□ -0.53
TOM1-202ENST00000395736 TRPC7Q9HCX4 862 aa11.74□□□□□ -0.53
TOM1-202ENST00000395736 GKN1Q9NS71 199 aa11.74□□□□□ -0.53
TOM1-202ENST00000395736 HMGXB4Q9UGU5 601 aa11.74□□□□□ -0.53
TOM1-202ENST00000395736 USP18Q9UMW8 372 aa11.74□□□□□ -0.53
TOM1-202ENST00000395736 MAPK8IP1Q9UQF2 711 aa11.74□□□□□ -0.53
TOM1-202ENST00000395736 PCDHGA2Q9Y5H1 932 aa11.74□□□□□ -0.53
TOM1-202ENST00000395736 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.74□□□□□ -0.53
TOM1-202ENST00000395736 A8MXQ7 604 aa11.73□□□□□ -0.53
TOM1-202ENST00000395736 SLC30A4O14863 429 aa11.73□□□□□ -0.53
TOM1-202ENST00000395736 AKAP3O75969 853 aa11.73□□□□□ -0.53
TOM1-202ENST00000395736 ZNF202O95125 648 aa11.73□□□□□ -0.53
TOM1-202ENST00000395736 CKMP06732 381 aa11.73□□□□□ -0.53
TOM1-202ENST00000395736 PROS1P07225 676 aa11.73□□□□□ -0.53
TOM1-202ENST00000395736 GRIK1P39086 918 aa11.73□□□□□ -0.53
TOM1-202ENST00000395736 AP3M2P53677 418 aa11.73□□□□□ -0.53
TOM1-202ENST00000395736 NOP14P78316 857 aaKnown RBP11.73□□□□□ -0.53
TOM1-202ENST00000395736 FAM160A1Q05DH4 1040 aa11.73□□□□□ -0.53
TOM1-202ENST00000395736 RUNX3Q13761 415 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms