RNA–Protein interactions for RNA: ENST00000395198.7

HERC4-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERC4, Length 4,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-204ENST00000395198 RIPK1Q13546 671 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 TRA2AQ13595 282 aaKnown RBP eCLIP4.47□□□□□ -1.69
HERC4-204ENST00000395198 PRR16Q569H4 304 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 FBXW10Q5XX13 1052 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 SZRD1Q7Z422 152 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 PIK3C3Q8NEB9 887 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 FIBINQ8TAL6 211 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 DPF2Q92785 391 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 CGREF1Q99674 301 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 ITPAQ9BY32 194 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 CCDC86Q9H6F5 360 aaKnown RBP4.47□□□□□ -1.69
HERC4-204ENST00000395198 SLC35D1Q9NTN3 355 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 TLR7Q9NYK1 1049 aaKnown RBP4.47□□□□□ -1.69
HERC4-204ENST00000395198 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.47□□□□□ -1.69
HERC4-204ENST00000395198 CACNG4Q9UBN1 327 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 RCOR1Q9UKL0 485 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 AURKCQ9UQB9 309 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 CLCA2Q9UQC9 943 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 COMMD3-BMI1R4GMX3 469 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 APOL1O14791 398 aa4.46□□□□□ -1.69
HERC4-204ENST00000395198 TLR2O60603 784 aa4.46□□□□□ -1.69
HERC4-204ENST00000395198 RBBP9O75884 186 aa4.46□□□□□ -1.69
HERC4-204ENST00000395198 CLPTM1O96005 669 aa4.46□□□□□ -1.69
HERC4-204ENST00000395198 ASNSP08243 561 aa4.46□□□□□ -1.69
HERC4-204ENST00000395198 JMJD7P0C870 316 aa4.46□□□□□ -1.69
HERC4-204ENST00000395198 RLBP1P12271 317 aa4.46□□□□□ -1.69
HERC4-204ENST00000395198 TSHRP16473 764 aa4.46□□□□□ -1.69
HERC4-204ENST00000395198 GALP22466 123 aa4.46□□□□□ -1.69
HERC4-204ENST00000395198 TLE2Q04725 743 aa4.46□□□□□ -1.69
HERC4-204ENST00000395198 ELP6Q0PNE2 266 aa4.46□□□□□ -1.69
HERC4-204ENST00000395198 SNCBQ16143 134 aa4.46□□□□□ -1.69
HERC4-204ENST00000395198 LRRC23Q53EV4 343 aaPredicted RBP4.46□□□□□ -1.69
HERC4-204ENST00000395198 ZNF805Q5CZA5 627 aa4.46□□□□□ -1.69
HERC4-204ENST00000395198 PIK3R6Q5UE93 754 aa4.46□□□□□ -1.69
HERC4-204ENST00000395198 CWF19L1Q69YN2 538 aaKnown RBP4.46□□□□□ -1.69
HERC4-204ENST00000395198 SV2BQ7L1I2 683 aa4.46□□□□□ -1.69
HERC4-204ENST00000395198 COMTD1Q86VU5 262 aa4.46□□□□□ -1.69
HERC4-204ENST00000395198 SESTD1Q86VW0 696 aa4.46□□□□□ -1.69
HERC4-204ENST00000395198 MFN1Q8IWA4 741 aa4.46□□□□□ -1.69
HERC4-204ENST00000395198 SYCP3Q8IZU3 236 aa4.46□□□□□ -1.69
HERC4-204ENST00000395198 NXPE1Q8N323 547 aa4.46□□□□□ -1.69
HERC4-204ENST00000395198 TCP11L2Q8N4U5 519 aa4.46□□□□□ -1.69
HERC4-204ENST00000395198 IGSF22Q8N9C0 903 aa4.46□□□□□ -1.69
HERC4-204ENST00000395198 TMEM145Q8NBT3 493 aa4.46□□□□□ -1.69
HERC4-204ENST00000395198 KIF18AQ8NI77 898 aa4.46□□□□□ -1.69
HERC4-204ENST00000395198 STARD8Q92502 1023 aa4.46□□□□□ -1.69
HERC4-204ENST00000395198 LPPQ93052 612 aa4.46□□□□□ -1.69
HERC4-204ENST00000395198 ZNF669Q96BR6 464 aaPredicted RBP4.46□□□□□ -1.69
HERC4-204ENST00000395198 C11orf24Q96F05 449 aaPredicted RBP4.46□□□□□ -1.69
HERC4-204ENST00000395198 PPP1R36Q96LQ0 422 aa4.46□□□□□ -1.69
HERC4-204ENST00000395198 MNTQ99583 582 aa4.46□□□□□ -1.69
HERC4-204ENST00000395198 API5Q9BZZ5 524 aaKnown RBP4.46□□□□□ -1.69
HERC4-204ENST00000395198 MRPL47Q9HD33 250 aaKnown RBP4.46□□□□□ -1.69
HERC4-204ENST00000395198 C14orf119Q9NWQ9 140 aa4.46□□□□□ -1.69
HERC4-204ENST00000395198 PAQR5Q9NXK6 330 aaPredicted RBP4.46□□□□□ -1.69
HERC4-204ENST00000395198 GMIPQ9P107 970 aa4.46□□□□□ -1.69
HERC4-204ENST00000395198 IQGAP2Q13576 1575 aa4.46□□□□□ -1.7
HERC4-204ENST00000395198 UGGT2Q9NYU1 1516 aa4.46□□□□□ -1.7
HERC4-204ENST00000395198 TRAF5O00463 557 aa4.46□□□□□ -1.7
HERC4-204ENST00000395198 PRODHO43272 600 aa4.46□□□□□ -1.7
HERC4-204ENST00000395198 CBFA2T3O75081 653 aa4.46□□□□□ -1.7
HERC4-204ENST00000395198 GNA14O95837 355 aa4.46□□□□□ -1.7
HERC4-204ENST00000395198 ALDH1A1P00352 501 aa4.46□□□□□ -1.7
HERC4-204ENST00000395198 TPOP07202 933 aa4.46□□□□□ -1.7
HERC4-204ENST00000395198 INHBAP08476 426 aa4.46□□□□□ -1.7
HERC4-204ENST00000395198 FNTAP49354 379 aa4.46□□□□□ -1.7
HERC4-204ENST00000395198 OCRLQ01968 901 aa4.46□□□□□ -1.7
HERC4-204ENST00000395198 CYLC2Q14093 348 aaPredicted RBP4.46□□□□□ -1.7
HERC4-204ENST00000395198 USP10Q14694 798 aaKnown RBP4.46□□□□□ -1.7
HERC4-204ENST00000395198 TIGD6Q17RP2 521 aa4.46□□□□□ -1.7
HERC4-204ENST00000395198 IQSEC1Q6DN90 963 aa4.46□□□□□ -1.7
HERC4-204ENST00000395198 MAP7D3Q8IWC1 876 aa4.46□□□□□ -1.7
HERC4-204ENST00000395198 C12orf56Q8IXR9 622 aa4.46□□□□□ -1.7
HERC4-204ENST00000395198 MPP5Q8N3R9 675 aa4.46□□□□□ -1.7
HERC4-204ENST00000395198 GPR150Q8NGU9 434 aa4.46□□□□□ -1.7
HERC4-204ENST00000395198 OR14C36Q8NHC7 312 aa4.46□□□□□ -1.7
HERC4-204ENST00000395198 SPATA20Q8TB22 786 aa4.46□□□□□ -1.7
HERC4-204ENST00000395198 CELF1Q92879 486 aaKnown RBP4.46□□□□□ -1.7
HERC4-204ENST00000395198 WNT8BQ93098 351 aa4.46□□□□□ -1.7
HERC4-204ENST00000395198 CCDC74AQ96AQ1 378 aa4.46□□□□□ -1.7
HERC4-204ENST00000395198 IFT74Q96LB3 600 aa4.46□□□□□ -1.7
HERC4-204ENST00000395198 NR1H4Q96RI1 486 aaPredicted RBP4.46□□□□□ -1.7
HERC4-204ENST00000395198 PLIN2Q99541 437 aa4.46□□□□□ -1.7
HERC4-204ENST00000395198 SPXQ9BT56 116 aa4.46□□□□□ -1.7
HERC4-204ENST00000395198 MRPL37Q9BZE1 423 aaKnown RBP4.46□□□□□ -1.7
HERC4-204ENST00000395198 RC3H2Q9HBD1 1191 aaKnown RBP4.46□□□□□ -1.7
HERC4-204ENST00000395198 C8orf4Q9NR00 106 aa4.46□□□□□ -1.7
HERC4-204ENST00000395198 GJB4Q9NTQ9 266 aa4.46□□□□□ -1.7
HERC4-204ENST00000395198 PCDHA5Q9Y5H7 936 aa4.46□□□□□ -1.7
HERC4-204ENST00000395198 DMRT1Q9Y5R6 373 aa4.46□□□□□ -1.7
HERC4-204ENST00000395198 SNX9Q9Y5X1 595 aa4.46□□□□□ -1.7
HERC4-204ENST00000395198 PLEKHH2Q8IVE3 1493 aa4.46□□□□□ -1.7
HERC4-204ENST00000395198 A0A1W2PQH9 124 aa4.46□□□□□ -1.7
HERC4-204ENST00000395198 HTR3EA5X5Y0 456 aa4.46□□□□□ -1.7
HERC4-204ENST00000395198 PRKAR1AP10644 381 aa4.46□□□□□ -1.7
HERC4-204ENST00000395198 ANPEPP15144 967 aa4.46□□□□□ -1.7
HERC4-204ENST00000395198 LONP1P36776 959 aaKnown RBP4.46□□□□□ -1.7
HERC4-204ENST00000395198 GRIA2P42262 883 aa4.46□□□□□ -1.7
HERC4-204ENST00000395198 ALDH1A3P47895 512 aa4.46□□□□□ -1.7
HERC4-204ENST00000395198 HSPA2P54652 639 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms